FFCP PHASE1:Hg19::chr10:105314881..105314945,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9148 | |EntrezGene=9148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7761 | |HGNC=7761 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000437579_5end | |association_with_transcript=-43bp_to_ENST00000437579_5end | ||
|cluster_id=chr10:105314881..105314945,+ | |||
|coexpression_cluster_id=C2975 | |coexpression_cluster_id=C2975 | ||
|description=CAGE_peak_3_at_NEURL_5end | |description=CAGE_peak_3_at_NEURL_5end | ||
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|ontology_enrichment_celltype=CL:0002057!3.85e-22!42;CL:0000860!2.12e-19!45;CL:0000557!6.42e-11!71;CL:0002009!1.24e-10!65;CL:0000766!2.58e-10!76;CL:0002194!2.83e-10!63;CL:0000576!2.83e-10!63;CL:0000040!2.83e-10!63;CL:0000559!2.83e-10!63;CL:0000839!3.56e-10!70;CL:0002393!2.82e-08!9;CL:0002397!2.82e-08!9 | |ontology_enrichment_celltype=CL:0002057!3.85e-22!42;CL:0000860!2.12e-19!45;CL:0000557!6.42e-11!71;CL:0002009!1.24e-10!65;CL:0000766!2.58e-10!76;CL:0002194!2.83e-10!63;CL:0000576!2.83e-10!63;CL:0000040!2.83e-10!63;CL:0000559!2.83e-10!63;CL:0000839!3.56e-10!70;CL:0002393!2.82e-08!9;CL:0002397!2.82e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.40e-15;33!CL:0002057;2.40e-15;33!CL:0000576;1.28e-13;48!CL:0000473;6.99e-10;39!CL:0000234;6.99e-10;39!CL:0000766;6.47e-09;69!CL:0002393;3.83e-08;6!CL:0002397;3.83e-08;6 | |ontology_enrichment_celltype_v019=CL:0000860;2.40e-15;33!CL:0002057;2.40e-15;33!CL:0000576;1.28e-13;48!CL:0000473;6.99e-10;39!CL:0000234;6.99e-10;39!CL:0000766;6.47e-09;69!CL:0002393;3.83e-08;6!CL:0002397;3.83e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.88e-26,42;CL:0002057,9.88e-26,42;CL:0000473,4.95e-21,48;CL:0000234,4.95e-21,48;CL:0000766,1.97e-15,72;CL:0000839,1.37e-14,66;CL:0002194,1.39e-14,59;CL:0000576,1.39e-14,59;CL:0000040,1.39e-14,59;CL:0000559,1.39e-14,59;CL:0000557,3.31e-14,67;CL:0002009,9.11e-14,61;CL:0002393,3.15e-12,9;CL:0002397,3.15e-12,9;CL:0000763,3.65e-07,108;CL:0000049,3.65e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-18;42!UBERON:0006601;7.16e-07;82 | |ontology_enrichment_development_v019=CL:0002057;2.73e-18;42!UBERON:0006601;7.16e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.76e-32!115;UBERON:0001049!1.18e-23!57;UBERON:0005068!1.18e-23!57;UBERON:0006241!1.18e-23!57;UBERON:0007135!1.18e-23!57;UBERON:0002780!1.22e-22!41;UBERON:0001890!1.22e-22!41;UBERON:0006240!1.22e-22!41;UBERON:0003080!1.16e-21!42;UBERON:0000955!4.62e-20!69;UBERON:0006238!4.62e-20!69;UBERON:0002616!5.38e-20!59;UBERON:0001893!4.94e-19!34;UBERON:0001869!6.42e-19!32;UBERON:0002020!6.47e-19!34;UBERON:0003528!6.47e-19!34;UBERON:0002791!2.95e-18!33;UBERON:0002619!3.89e-18!22;UBERON:0001017!8.28e-18!82;UBERON:0005743!7.29e-17!86;UBERON:0001950!8.30e-17!20;UBERON:0000073!9.36e-17!94;UBERON:0001016!9.36e-17!94;UBERON:0003075!5.21e-15!86;UBERON:0007284!5.21e-15!86;UBERON:0000956!1.16e-14!25;UBERON:0000203!1.16e-14!25;UBERON:0002346!2.94e-14!90;UBERON:0003056!5.08e-14!61;UBERON:0000062!4.69e-12!511;UBERON:0000153!6.74e-10!129;UBERON:0007811!6.74e-10!129;UBERON:0000033!1.34e-09!123;UBERON:0000922!2.56e-09!612;UBERON:0000468!7.57e-09!659;UBERON:0002390!7.94e-09!102;UBERON:0003061!7.94e-09!102;UBERON:0001474!1.95e-08!86;UBERON:0002050!6.89e-08!605;UBERON:0005423!6.89e-08!605;UBERON:0002371!7.11e-08!80;UBERON:0000467!7.92e-08!625;UBERON:0004121!8.68e-08!169;UBERON:0000480!1.05e-07!626;UBERON:0000923!1.29e-07!604;UBERON:0005291!1.29e-07!604;UBERON:0006598!1.29e-07!604;UBERON:0002532!1.29e-07!604;UBERON:0000924!1.47e-07!173;UBERON:0006601!1.47e-07!173;UBERON:0001871!2.26e-07!7;UBERON:0002193!3.91e-07!112 | |ontology_enrichment_uberon=UBERON:0007023!4.76e-32!115;UBERON:0001049!1.18e-23!57;UBERON:0005068!1.18e-23!57;UBERON:0006241!1.18e-23!57;UBERON:0007135!1.18e-23!57;UBERON:0002780!1.22e-22!41;UBERON:0001890!1.22e-22!41;UBERON:0006240!1.22e-22!41;UBERON:0003080!1.16e-21!42;UBERON:0000955!4.62e-20!69;UBERON:0006238!4.62e-20!69;UBERON:0002616!5.38e-20!59;UBERON:0001893!4.94e-19!34;UBERON:0001869!6.42e-19!32;UBERON:0002020!6.47e-19!34;UBERON:0003528!6.47e-19!34;UBERON:0002791!2.95e-18!33;UBERON:0002619!3.89e-18!22;UBERON:0001017!8.28e-18!82;UBERON:0005743!7.29e-17!86;UBERON:0001950!8.30e-17!20;UBERON:0000073!9.36e-17!94;UBERON:0001016!9.36e-17!94;UBERON:0003075!5.21e-15!86;UBERON:0007284!5.21e-15!86;UBERON:0000956!1.16e-14!25;UBERON:0000203!1.16e-14!25;UBERON:0002346!2.94e-14!90;UBERON:0003056!5.08e-14!61;UBERON:0000062!4.69e-12!511;UBERON:0000153!6.74e-10!129;UBERON:0007811!6.74e-10!129;UBERON:0000033!1.34e-09!123;UBERON:0000922!2.56e-09!612;UBERON:0000468!7.57e-09!659;UBERON:0002390!7.94e-09!102;UBERON:0003061!7.94e-09!102;UBERON:0001474!1.95e-08!86;UBERON:0002050!6.89e-08!605;UBERON:0005423!6.89e-08!605;UBERON:0002371!7.11e-08!80;UBERON:0000467!7.92e-08!625;UBERON:0004121!8.68e-08!169;UBERON:0000480!1.05e-07!626;UBERON:0000923!1.29e-07!604;UBERON:0005291!1.29e-07!604;UBERON:0006598!1.29e-07!604;UBERON:0002532!1.29e-07!604;UBERON:0000924!1.47e-07!173;UBERON:0006601!1.47e-07!173;UBERON:0001871!2.26e-07!7;UBERON:0002193!3.91e-07!112 | ||
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| ||
|short_description=p3@NEURL | |short_description=p3@NEURL | ||
}} | }} |
Latest revision as of 03:51, 16 September 2015
Short description: | p3@NEURL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NEURL_5end |
Coexpression cluster: | C2975_CD14CD16_CD14_smallcell_cerebellum_eye_pineal_merkel |
Association with transcript: | -43bp_to_ENST00000437579_5end |
EntrezGene: | NEURL |
HGNC: | 7761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.88e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.88e-26 | 42 |
defensive cell | 4.95e-21 | 48 |
phagocyte | 4.95e-21 | 48 |
myeloid leukocyte | 1.97e-15 | 72 |
myeloid lineage restricted progenitor cell | 1.37e-14 | 66 |
monopoietic cell | 1.39e-14 | 59 |
monocyte | 1.39e-14 | 59 |
monoblast | 1.39e-14 | 59 |
promonocyte | 1.39e-14 | 59 |
granulocyte monocyte progenitor cell | 3.31e-14 | 67 |
macrophage dendritic cell progenitor | 9.11e-14 | 61 |
intermediate monocyte | 3.15e-12 | 9 |
CD14-positive, CD16-positive monocyte | 3.15e-12 | 9 |
myeloid cell | 3.65e-07 | 108 |
common myeloid progenitor | 3.65e-07 | 108 |