FFCP PHASE1:Hg19::chr6:151042248..151042293,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:151042248..151042293,+
|short_description=p2@PLEKHG1
|description=CAGE_peak_2_at_PLEKHG1_5end
|association_with_transcript=24bp_to_ENST00000358517_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57480 | |EntrezGene=57480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20884 | |HGNC=20884 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULL1 | |UniProt=Q9ULL1 | ||
|association_with_transcript=24bp_to_ENST00000358517_5end | |||
|cluster_id=chr6:151042248..151042293,+ | |||
|coexpression_cluster_id=C1711 | |||
|description=CAGE_peak_2_at_PLEKHG1_5end | |||
|id=chr6:151042248..151042293,+ | |||
|ontology_enrichment_celltype=CL:0000128!3.32e-10!7;CL:0000126!3.32e-10!7;CL:0000127!3.32e-10!7;CL:0002453!3.32e-10!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;1.00e-16;7!CL:0000126;1.00e-16;7!CL:0000127;1.00e-16;7!CL:0002319;1.73e-10;25!CL:0002605;1.47e-08;3!CL:0000064;2.73e-08;3!CL:0000067;2.73e-08;3!CL:0005012;2.73e-08;3!CL:0002304;2.73e-08;3!CL:0002603;1.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.55e-16,7;CL:0000126,1.55e-16,7;CL:0000127,1.55e-16,7;CL:0002453,1.55e-16,7;CL:0002319,2.06e-10,25;CL:0002605,1.49e-08,3;CL:0000064,2.71e-08,3;CL:0000067,2.71e-08,3;CL:0005012,2.71e-08,3;CL:0002304,2.71e-08,3;CL:0000047,1.11e-07,8;CL:0002603,2.30e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.24e-07;3!UBERON:0003057;1.24e-07;3!UBERON:0006601;1.90e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.72e-44!82;UBERON:0001049!8.86e-43!57;UBERON:0005068!8.86e-43!57;UBERON:0006241!8.86e-43!57;UBERON:0007135!8.86e-43!57;UBERON:0005743!1.05e-42!86;UBERON:0002616!4.19e-38!59;UBERON:0000073!4.27e-38!94;UBERON:0001016!4.27e-38!94;UBERON:0003075!4.61e-36!86;UBERON:0007284!4.61e-36!86;UBERON:0000955!6.29e-36!69;UBERON:0006238!6.29e-36!69;UBERON:0002346!1.03e-34!90;UBERON:0002780!9.76e-30!41;UBERON:0001890!9.76e-30!41;UBERON:0006240!9.76e-30!41;UBERON:0003080!9.75e-29!42;UBERON:0002020!3.34e-27!34;UBERON:0003528!3.34e-27!34;UBERON:0001893!5.24e-27!34;UBERON:0000153!1.62e-26!129;UBERON:0007811!1.62e-26!129;UBERON:0007023!1.81e-26!115;UBERON:0002791!4.70e-26!33;UBERON:0003056!1.04e-25!61;UBERON:0001869!8.92e-25!32;UBERON:0000033!1.05e-24!123;UBERON:0004121!6.21e-22!169;UBERON:0000924!1.40e-21!173;UBERON:0006601!1.40e-21!173;UBERON:0000956!2.90e-18!25;UBERON:0000203!2.90e-18!25;UBERON:0003076!4.06e-15!15;UBERON:0003057!4.06e-15!15;UBERON:0002619!1.12e-14!22;UBERON:0001950!9.06e-13!20;UBERON:0004732!1.31e-12!13;UBERON:0000064!1.85e-12!219;UBERON:0004733!1.07e-11!12;UBERON:0002028!1.07e-11!12;UBERON:0007277!1.07e-11!12;UBERON:0002308!1.26e-10!9;UBERON:0000125!1.26e-10!9;UBERON:0002420!3.86e-10!9;UBERON:0007245!3.86e-10!9;UBERON:0010009!3.86e-10!9;UBERON:0010011!3.86e-10!9;UBERON:0000454!3.86e-10!9;UBERON:0000025!4.41e-10!194;UBERON:0000062!7.14e-09!511;UBERON:0000477!2.19e-08!286;UBERON:0009663!2.58e-08!7;UBERON:0002680!2.64e-08!9;UBERON:0001895!2.64e-08!9;UBERON:0010092!2.64e-08!9;UBERON:0002298!3.44e-08!8;UBERON:0004111!8.30e-08!241;UBERON:0000119!1.70e-07!312;UBERON:0000483!2.19e-07!309;UBERON:0000922!3.38e-07!612;UBERON:0000475!5.56e-07!365;UBERON:0001871!8.27e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.79e-30;53!UBERON:0002616;3.79e-30;53!UBERON:0001893;1.77e-29;34!UBERON:0003528;4.67e-28;34!UBERON:0002020;4.67e-28;34!UBERON:0002780;6.27e-28;41!UBERON:0001890;6.27e-28;41!UBERON:0002791;1.69e-27;32!UBERON:0001869;9.14e-27;32!UBERON:0000956;1.68e-21;25!UBERON:0000203;1.68e-21;25!UBERON:0001017;2.04e-19;75!UBERON:0001016;3.21e-17;83!UBERON:0000955;3.62e-17;68!UBERON:0002619;6.00e-16;22!UBERON:0004732;1.24e-15;13!UBERON:0000125;2.98e-14;9!UBERON:0002308;2.98e-14;9!UBERON:0004733;4.55e-14;12!UBERON:0002028;4.55e-14;12!UBERON:0002298;1.42e-13;6!UBERON:0001950;4.72e-13;20!UBERON:0002420;1.62e-10;9!UBERON:0007245;1.62e-10;9!UBERON:0010009;1.62e-10;9!UBERON:0010011;1.62e-10;9!UBERON:0000454;1.62e-10;9!UBERON:0009663;2.28e-10;7!UBERON:0002680;1.14e-08;9!UBERON:0001895;1.14e-08;9!UBERON:0000369;1.24e-08;4!UBERON:0002435;1.24e-08;4!UBERON:0000204;1.24e-08;4!UBERON:0001778;2.73e-08;3!UBERON:0001775;2.73e-08;3!UBERON:0001896;1.10e-07;3!UBERON:0005290;1.10e-07;3!UBERON:0002240;1.24e-07;3!UBERON:0005174;1.24e-07;3!UBERON:0001137;1.24e-07;3!UBERON:0000988;1.49e-07;3!UBERON:0005383;5.27e-07;3!UBERON:0005382;5.27e-07;3!UBERON:0007023;9.21e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.77e-55,56;UBERON:0005068,2.77e-55,56;UBERON:0006241,2.77e-55,56;UBERON:0007135,2.77e-55,56;UBERON:0001017,2.83e-55,81;UBERON:0001016,1.55e-50,89;UBERON:0000073,1.41e-49,53;UBERON:0002616,1.41e-49,53;UBERON:0003075,2.95e-45,82;UBERON:0007284,2.95e-45,82;UBERON:0000955,1.39e-42,68;UBERON:0006238,1.39e-42,68;UBERON:0002346,1.52e-42,86;UBERON:0002780,1.40e-36,41;UBERON:0001890,1.40e-36,41;UBERON:0003080,1.40e-36,41;UBERON:0006240,1.40e-36,41;UBERON:0003528,1.55e-33,34;UBERON:0002020,1.55e-33,34;UBERON:0001893,3.01e-33,34;UBERON:0010371,6.35e-33,104;UBERON:0003056,1.96e-32,61;UBERON:0002791,7.13e-30,32;UBERON:0001869,1.17e-29,32;UBERON:0004121,5.29e-26,171;UBERON:0000924,5.29e-26,171;UBERON:0006601,5.29e-26,171;UBERON:0010314,6.92e-26,132;UBERON:0011216,1.06e-21,223;UBERON:0000956,2.10e-21,25;UBERON:0000203,2.10e-21,25;UBERON:0003076,1.31e-19,15;UBERON:0003057,1.31e-19,15;UBERON:0007023,2.11e-19,114;UBERON:0002619,7.27e-16,22;UBERON:0004732,1.76e-15,13;UBERON:0000125,4.16e-14,9;UBERON:0002308,4.16e-14,9;UBERON:0004733,5.97e-14,12;UBERON:0002028,5.97e-14,12;UBERON:0007277,5.97e-14,12;UBERON:0002298,1.39e-13,6;UBERON:0001950,5.90e-13,20;UBERON:0002420,1.76e-10,9;UBERON:0007245,1.76e-10,9;UBERON:0010009,1.76e-10,9;UBERON:0010011,1.76e-10,9;UBERON:0000454,1.76e-10,9;UBERON:0000025,1.82e-10,192;UBERON:0009663,3.18e-10,7;UBERON:0002680,1.53e-08,9;UBERON:0001895,1.53e-08,9;UBERON:0010092,1.53e-08,9;UBERON:0000369,1.85e-08,4;UBERON:0002435,1.85e-08,4;UBERON:0000204,1.85e-08,4;UBERON:0010082,1.85e-08,4;UBERON:0001778,2.71e-08,3;UBERON:0001775,2.71e-08,3;UBERON:0001896,1.01e-07,3;UBERON:0005290,1.01e-07,3;UBERON:0010096,1.01e-07,3;UBERON:0002240,1.06e-07,3;UBERON:0005174,1.06e-07,3;UBERON:0001137,1.06e-07,3;UBERON:0000988,1.58e-07,3;UBERON:0004111,2.60e-07,240;UBERON:0005383,5.46e-07,3;UBERON:0005382,5.46e-07,3 | |||
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| ||
|short_description=p2@PLEKHG1 | |||
}} | }} |
Latest revision as of 04:10, 16 September 2015
Short description: | p2@PLEKHG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLEKHG1_5end |
Coexpression cluster: | C1711_astrocytoma_Astrocyte_Neural_Wilms_acute_Ciliary_Lens |
Association with transcript: | 24bp_to_ENST00000358517_5end |
EntrezGene: | PLEKHG1 |
HGNC: | 20884 |
UniProt: | Q9ULL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.55e-16 | 7 |
macroglial cell | 1.55e-16 | 7 |
astrocyte | 1.55e-16 | 7 |
oligodendrocyte precursor cell | 1.55e-16 | 7 |
neural cell | 2.06e-10 | 25 |
astrocyte of the cerebral cortex | 1.49e-08 | 3 |
ciliated cell | 2.71e-08 | 3 |
ciliated epithelial cell | 2.71e-08 | 3 |
multi-ciliated epithelial cell | 2.71e-08 | 3 |
non-pigmented ciliary epithelial cell | 2.71e-08 | 3 |
neuronal stem cell | 1.11e-07 | 8 |
astrocyte of the cerebellum | 2.30e-07 | 3 |