FFCP PHASE1:Hg19::chr3:159557858..159557882,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000472483_5end | |association_with_transcript=-5bp_to_ENST00000472483_5end | ||
|cluster_id=chr3:159557858..159557882,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_8_at_SCHIP1_5end | |description=CAGE_peak_8_at_SCHIP1_5end | ||
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|ontology_enrichment_celltype=CL:0002319!3.10e-13!25;CL:0000047!3.37e-10!8;CL:0000133!1.11e-09!59;CL:0000540!9.91e-08!6;CL:0000031!9.91e-08!6;CL:0000404!9.91e-08!6;CL:0000128!3.62e-07!7;CL:0000126!3.62e-07!7;CL:0000127!3.62e-07!7;CL:0002453!3.62e-07!7;CL:0000221!8.86e-07!71 | |ontology_enrichment_celltype=CL:0002319!3.10e-13!25;CL:0000047!3.37e-10!8;CL:0000133!1.11e-09!59;CL:0000540!9.91e-08!6;CL:0000031!9.91e-08!6;CL:0000404!9.91e-08!6;CL:0000128!3.62e-07!7;CL:0000126!3.62e-07!7;CL:0000127!3.62e-07!7;CL:0002453!3.62e-07!7;CL:0000221!8.86e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.98e-11;6!CL:0000404;4.98e-11;6!CL:0002322;2.04e-08;5!CL:0002321;2.24e-08;15!CL:0002319;5.12e-08;25!CL:0000333;9.69e-07;5 | |ontology_enrichment_celltype_v019=CL:0000540;4.98e-11;6!CL:0000404;4.98e-11;6!CL:0002322;2.04e-08;5!CL:0002321;2.24e-08;15!CL:0002319;5.12e-08;25!CL:0000333;9.69e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.01e-14,8;CL:0000540,5.74e-11,6;CL:0000031,5.74e-11,6;CL:0000404,5.74e-11,6;CL:0002322,2.27e-08,5;CL:0002319,5.11e-08,25;CL:0000133,2.07e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.22e-18;82!CL:0000031;4.98e-11;6!UBERON:0006215;8.70e-08;3 | |ontology_enrichment_development_v019=UBERON:0006601;6.22e-18;82!CL:0000031;4.98e-11;6!UBERON:0006215;8.70e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.76e-73!94;UBERON:0001016!4.76e-73!94;UBERON:0001017!5.29e-68!82;UBERON:0005743!1.63e-67!86;UBERON:0001049!3.61e-63!57;UBERON:0005068!3.61e-63!57;UBERON:0006241!3.61e-63!57;UBERON:0007135!3.61e-63!57;UBERON:0002616!5.66e-55!59;UBERON:0000955!3.40e-53!69;UBERON:0006238!3.40e-53!69;UBERON:0003075!4.16e-51!86;UBERON:0007284!4.16e-51!86;UBERON:0002780!1.95e-48!41;UBERON:0001890!1.95e-48!41;UBERON:0006240!1.95e-48!41;UBERON:0002346!8.72e-48!90;UBERON:0003080!6.35e-47!42;UBERON:0007023!1.36e-46!115;UBERON:0004121!4.79e-43!169;UBERON:0000924!2.37e-41!173;UBERON:0006601!2.37e-41!173;UBERON:0001893!7.39e-41!34;UBERON:0002020!1.27e-40!34;UBERON:0003528!1.27e-40!34;UBERON:0002791!1.48e-39!33;UBERON:0003056!4.29e-39!61;UBERON:0001869!8.83e-39!32;UBERON:0000153!2.02e-35!129;UBERON:0007811!2.02e-35!129;UBERON:0000033!6.90e-34!123;UBERON:0000956!4.45e-30!25;UBERON:0000203!4.45e-30!25;UBERON:0002619!3.80e-27!22;UBERON:0001950!8.39e-25!20;UBERON:0003076!1.16e-16!15;UBERON:0003057!1.16e-16!15;UBERON:0004732!1.34e-14!13;UBERON:0000025!8.31e-14!194;UBERON:0004733!1.60e-13!12;UBERON:0002028!1.60e-13!12;UBERON:0007277!1.60e-13!12;UBERON:0002420!2.72e-12!9;UBERON:0007245!2.72e-12!9;UBERON:0010009!2.72e-12!9;UBERON:0010011!2.72e-12!9;UBERON:0000454!2.72e-12!9;UBERON:0002308!7.59e-12!9;UBERON:0000125!7.59e-12!9;UBERON:0000064!8.09e-11!219;UBERON:0000922!1.17e-10!612;UBERON:0000119!1.36e-10!312;UBERON:0002680!1.67e-10!9;UBERON:0001895!1.67e-10!9;UBERON:0010092!1.67e-10!9;UBERON:0004111!2.36e-10!241;UBERON:0000483!4.39e-10!309;UBERON:0009663!8.47e-10!7;UBERON:0000477!3.81e-09!286;UBERON:0000200!3.96e-09!6;UBERON:0000475!5.77e-09!365;UBERON:0001894!7.87e-09!7;UBERON:0006222!7.87e-09!7;UBERON:0001871!1.30e-08!7;UBERON:0000923!4.37e-08!604;UBERON:0005291!4.37e-08!604;UBERON:0006598!4.37e-08!604;UBERON:0002532!4.37e-08!604;UBERON:0002050!5.18e-08!605;UBERON:0005423!5.18e-08!605;UBERON:0001872!5.63e-08!5;UBERON:0000468!7.27e-08!659;UBERON:0000481!1.07e-07!347;UBERON:0002021!1.11e-07!5;UBERON:0000349!1.20e-07!5;UBERON:0002037!2.03e-07!6;UBERON:0006215!2.03e-07!6;UBERON:0002298!2.06e-07!8;UBERON:0000467!5.24e-07!625;UBERON:0000480!6.14e-07!626 | |ontology_enrichment_uberon=UBERON:0000073!4.76e-73!94;UBERON:0001016!4.76e-73!94;UBERON:0001017!5.29e-68!82;UBERON:0005743!1.63e-67!86;UBERON:0001049!3.61e-63!57;UBERON:0005068!3.61e-63!57;UBERON:0006241!3.61e-63!57;UBERON:0007135!3.61e-63!57;UBERON:0002616!5.66e-55!59;UBERON:0000955!3.40e-53!69;UBERON:0006238!3.40e-53!69;UBERON:0003075!4.16e-51!86;UBERON:0007284!4.16e-51!86;UBERON:0002780!1.95e-48!41;UBERON:0001890!1.95e-48!41;UBERON:0006240!1.95e-48!41;UBERON:0002346!8.72e-48!90;UBERON:0003080!6.35e-47!42;UBERON:0007023!1.36e-46!115;UBERON:0004121!4.79e-43!169;UBERON:0000924!2.37e-41!173;UBERON:0006601!2.37e-41!173;UBERON:0001893!7.39e-41!34;UBERON:0002020!1.27e-40!34;UBERON:0003528!1.27e-40!34;UBERON:0002791!1.48e-39!33;UBERON:0003056!4.29e-39!61;UBERON:0001869!8.83e-39!32;UBERON:0000153!2.02e-35!129;UBERON:0007811!2.02e-35!129;UBERON:0000033!6.90e-34!123;UBERON:0000956!4.45e-30!25;UBERON:0000203!4.45e-30!25;UBERON:0002619!3.80e-27!22;UBERON:0001950!8.39e-25!20;UBERON:0003076!1.16e-16!15;UBERON:0003057!1.16e-16!15;UBERON:0004732!1.34e-14!13;UBERON:0000025!8.31e-14!194;UBERON:0004733!1.60e-13!12;UBERON:0002028!1.60e-13!12;UBERON:0007277!1.60e-13!12;UBERON:0002420!2.72e-12!9;UBERON:0007245!2.72e-12!9;UBERON:0010009!2.72e-12!9;UBERON:0010011!2.72e-12!9;UBERON:0000454!2.72e-12!9;UBERON:0002308!7.59e-12!9;UBERON:0000125!7.59e-12!9;UBERON:0000064!8.09e-11!219;UBERON:0000922!1.17e-10!612;UBERON:0000119!1.36e-10!312;UBERON:0002680!1.67e-10!9;UBERON:0001895!1.67e-10!9;UBERON:0010092!1.67e-10!9;UBERON:0004111!2.36e-10!241;UBERON:0000483!4.39e-10!309;UBERON:0009663!8.47e-10!7;UBERON:0000477!3.81e-09!286;UBERON:0000200!3.96e-09!6;UBERON:0000475!5.77e-09!365;UBERON:0001894!7.87e-09!7;UBERON:0006222!7.87e-09!7;UBERON:0001871!1.30e-08!7;UBERON:0000923!4.37e-08!604;UBERON:0005291!4.37e-08!604;UBERON:0006598!4.37e-08!604;UBERON:0002532!4.37e-08!604;UBERON:0002050!5.18e-08!605;UBERON:0005423!5.18e-08!605;UBERON:0001872!5.63e-08!5;UBERON:0000468!7.27e-08!659;UBERON:0000481!1.07e-07!347;UBERON:0002021!1.11e-07!5;UBERON:0000349!1.20e-07!5;UBERON:0002037!2.03e-07!6;UBERON:0006215!2.03e-07!6;UBERON:0002298!2.06e-07!8;UBERON:0000467!5.24e-07!625;UBERON:0000480!6.14e-07!626 | ||
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| ||
|short_description=p8@SCHIP1 | |short_description=p8@SCHIP1 | ||
}} | }} |
Latest revision as of 09:43, 16 September 2015
Short description: | p8@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SCHIP1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -5bp_to_ENST00000472483_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.01e-14 | 8 |
neuron | 5.74e-11 | 6 |
neuroblast | 5.74e-11 | 6 |
electrically signaling cell | 5.74e-11 | 6 |
embryonic stem cell | 2.27e-08 | 5 |
neural cell | 5.11e-08 | 25 |
neurectodermal cell | 2.07e-07 | 59 |