FFCP PHASE1:Hg19::chr3:184097905..184097936,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8646 | |EntrezGene=8646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1949 | |HGNC=1949 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2X0 | |UniProt=Q9H2X0 | ||
|association_with_transcript=44bp_to_ENST00000204604,ENST00000310236,ENST00000356534,ENST00000420973,ENST00000448472,ENST00000460627,NM_003741,uc003fov.2,uc003fow.2,uc003fox.2,uc003foy.2_5end | |association_with_transcript=44bp_to_ENST00000204604,ENST00000310236,ENST00000356534,ENST00000420973,ENST00000448472,ENST00000460627,NM_003741,uc003fov.2,uc003fow.2,uc003fox.2,uc003foy.2_5end | ||
|cluster_id=chr3:184097905..184097936,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_5_at_CHRD_5end | |description=CAGE_peak_5_at_CHRD_5end | ||
|id=chr3:184097905..184097936,+ | |id=chr3:184097905..184097936,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;9.37e-08;1!CL:0000164;9.37e-08;1!CL:0000502;9.37e-08;1!CL:0000172;9.37e-08;1!CL:0000173;9.37e-08;1!CL:0002581;2.34e-07;1!CL:0000313;2.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,8.54e-08,1;CL:0000164,8.54e-08,1;CL:0000502,8.54e-08,1;CL:0000172,8.54e-08,1;CL:0000173,8.54e-08,1;CL:0002351,8.54e-08,1;CL:0002581,1.95e-07,1;CL:0000313,3.62e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.34e-20;3!CL:0002351;9.37e-08;1!UBERON:0010227;2.34e-07;1!UBERON:0010226;2.34e-07;1!UBERON:0005425;2.34e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;9.37e-08;1!DOID:2152;2.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,8.54e-08,1;DOID:2152,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-44!115;UBERON:0001049!1.30e-28!57;UBERON:0005068!1.30e-28!57;UBERON:0006241!1.30e-28!57;UBERON:0007135!1.30e-28!57;UBERON:0000955!1.27e-23!69;UBERON:0006238!1.27e-23!69;UBERON:0002616!8.59e-23!59;UBERON:0001017!1.24e-22!82;UBERON:0003075!4.45e-22!86;UBERON:0007284!4.45e-22!86;UBERON:0002020!8.45e-22!34;UBERON:0003528!8.45e-22!34;UBERON:0005743!1.04e-21!86;UBERON:0001893!1.08e-21!34;UBERON:0002791!9.47e-21!33;UBERON:0001869!9.69e-21!32;UBERON:0002780!1.35e-20!41;UBERON:0001890!1.35e-20!41;UBERON:0006240!1.35e-20!41;UBERON:0002619!2.36e-20!22;UBERON:0002346!2.76e-20!90;UBERON:0003080!7.77e-20!42;UBERON:0000073!4.02e-19!94;UBERON:0001016!4.02e-19!94;UBERON:0000956!1.94e-18!25;UBERON:0000203!1.94e-18!25;UBERON:0001950!2.24e-18!20;UBERON:0000033!1.39e-12!123;UBERON:0000153!1.51e-12!129;UBERON:0007811!1.51e-12!129;UBERON:0003056!5.40e-12!61;UBERON:0003076!5.39e-10!15;UBERON:0003057!5.39e-10!15;UBERON:0004121!8.36e-10!169;UBERON:0000025!3.14e-09!194;UBERON:0000924!3.57e-09!173;UBERON:0006601!3.57e-09!173;UBERON:0004732!9.34e-09!13;UBERON:0000064!1.51e-08!219;UBERON:0004111!3.01e-08!241;UBERON:0000200!3.20e-08!6;UBERON:0000475!3.85e-08!365;UBERON:0004733!9.44e-08!12;UBERON:0002028!9.44e-08!12;UBERON:0007277!9.44e-08!12;UBERON:0001871!1.81e-07!7;UBERON:0002680!2.09e-07!9;UBERON:0001895!2.09e-07!9;UBERON:0010092!2.09e-07!9;UBERON:0000062!3.64e-07!511;UBERON:0000477!7.13e-07!286;UBERON:0000349!7.34e-07!5 | |ontology_enrichment_uberon=UBERON:0007023!1.65e-44!115;UBERON:0001049!1.30e-28!57;UBERON:0005068!1.30e-28!57;UBERON:0006241!1.30e-28!57;UBERON:0007135!1.30e-28!57;UBERON:0000955!1.27e-23!69;UBERON:0006238!1.27e-23!69;UBERON:0002616!8.59e-23!59;UBERON:0001017!1.24e-22!82;UBERON:0003075!4.45e-22!86;UBERON:0007284!4.45e-22!86;UBERON:0002020!8.45e-22!34;UBERON:0003528!8.45e-22!34;UBERON:0005743!1.04e-21!86;UBERON:0001893!1.08e-21!34;UBERON:0002791!9.47e-21!33;UBERON:0001869!9.69e-21!32;UBERON:0002780!1.35e-20!41;UBERON:0001890!1.35e-20!41;UBERON:0006240!1.35e-20!41;UBERON:0002619!2.36e-20!22;UBERON:0002346!2.76e-20!90;UBERON:0003080!7.77e-20!42;UBERON:0000073!4.02e-19!94;UBERON:0001016!4.02e-19!94;UBERON:0000956!1.94e-18!25;UBERON:0000203!1.94e-18!25;UBERON:0001950!2.24e-18!20;UBERON:0000033!1.39e-12!123;UBERON:0000153!1.51e-12!129;UBERON:0007811!1.51e-12!129;UBERON:0003056!5.40e-12!61;UBERON:0003076!5.39e-10!15;UBERON:0003057!5.39e-10!15;UBERON:0004121!8.36e-10!169;UBERON:0000025!3.14e-09!194;UBERON:0000924!3.57e-09!173;UBERON:0006601!3.57e-09!173;UBERON:0004732!9.34e-09!13;UBERON:0000064!1.51e-08!219;UBERON:0004111!3.01e-08!241;UBERON:0000200!3.20e-08!6;UBERON:0000475!3.85e-08!365;UBERON:0004733!9.44e-08!12;UBERON:0002028!9.44e-08!12;UBERON:0007277!9.44e-08!12;UBERON:0001871!1.81e-07!7;UBERON:0002680!2.09e-07!9;UBERON:0001895!2.09e-07!9;UBERON:0010092!2.09e-07!9;UBERON:0000062!3.64e-07!511;UBERON:0000477!7.13e-07!286;UBERON:0000349!7.34e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.26e-46;20!UBERON:0002619;4.04e-42;22!UBERON:0000956;5.75e-37;25!UBERON:0000203;5.75e-37;25!UBERON:0000200;3.03e-25;6!UBERON:0001869;3.76e-25;32!UBERON:0002791;4.15e-25;32!UBERON:0001893;1.02e-24;34!UBERON:0003528;2.15e-24;34!UBERON:0002020;2.15e-24;34!UBERON:0001870;1.12e-18;3!UBERON:0000073;9.08e-15;53!UBERON:0002616;9.08e-15;53!UBERON:0002780;2.91e-14;41!UBERON:0001890;2.91e-14;41!UBERON:0001871;3.37e-14;6!UBERON:0002771;1.99e-13;2!UBERON:0001876;4.87e-13;2!UBERON:0002702;4.87e-13;2!UBERON:0002021;1.05e-11;5!UBERON:0001872;1.18e-11;5!UBERON:0002037;2.37e-10;6!UBERON:0000955;3.14e-10;68!UBERON:0001016;2.44e-09;83!UBERON:0001017;3.60e-09;75!UBERON:0004151;5.49e-09;3!UBERON:0004732;4.98e-08;13!UBERON:0002581;2.34e-07;1!UBERON:0002902;2.34e-07;1!UBERON:0002084;2.34e-07;1!UBERON:0002079;2.34e-07;1!UBERON:0006834;2.34e-07;1!UBERON:0003112;2.34e-07;1!UBERON:0000996;2.34e-07;1!UBERON:0000941;2.34e-07;1!UBERON:0004911;2.34e-07;1!UBERON:0001785;2.34e-07;1!UBERON:0002464;2.34e-07;1!UBERON:0004904;2.34e-07;1!UBERON:0011158;2.34e-07;1!UBERON:0001021;2.34e-07;1!UBERON:0002082;2.34e-07;1!UBERON:0009899;2.34e-07;1!UBERON:0003128;2.34e-07;1!UBERON:0001703;2.34e-07;1!UBERON:0002241;2.34e-07;1!UBERON:0007023;2.61e-07;114!UBERON:0002680;4.88e-07;9!UBERON:0001895;4.88e-07;9 | |||
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| ||
|short_description=p5@CHRD | |short_description=p5@CHRD | ||
}} | }} |
Latest revision as of 02:33, 17 September 2015
Short description: | p5@CHRD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHRD_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 44bp_to_ENST00000204604, ENST00000310236, ENST00000356534, ENST00000420973, ENST00000448472, ENST00000460627, NM_003741, uc003fov.2, uc003fow.2, uc003fox.2, uc003foy.2_5end |
EntrezGene: | CHRD |
HGNC: | 1949 |
UniProt: | Q9H2X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 8.54e-08 | 1 |
enteroendocrine cell | 8.54e-08 | 1 |
type D enteroendocrine cell | 8.54e-08 | 1 |
somatostatin secreting cell | 8.54e-08 | 1 |
pancreatic D cell | 8.54e-08 | 1 |
progenitor cell of endocrine pancreas | 8.54e-08 | 1 |
perirenal preadipocyte | 1.95e-07 | 1 |
serous secreting cell | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 8.54e-08 | 1 |
ovary epithelial cancer | 3.62e-07 | 1 |