FFCP PHASE1:Hg19::chr16:77822451..77822469,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:77822451..77822469,+
|short_description=p2@VAT1L
|description=CAGE_peak_2_at_VAT1L_5end
|association_with_transcript=-13bp_to_ENST00000302536,NM_020927,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57687 | |EntrezGene=57687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29315 | |HGNC=29315 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCJ6 | |UniProt=Q9HCJ6 | ||
|association_with_transcript=-13bp_to_ENST00000302536,NM_020927,uc002ffg.1_5end | |||
|cluster_id=chr16:77822451..77822469,+ | |||
|coexpression_cluster_id=C3590 | |||
|description=CAGE_peak_2_at_VAT1L_5end | |||
|id=chr16:77822451..77822469,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.90e-14!180;CL:0000192!5.28e-09!42;CL:0000514!5.28e-09!42;CL:0000393!6.57e-09!60;CL:0000211!6.57e-09!60;CL:0000183!2.25e-08!59;CL:0000057!4.92e-08!75;CL:0002539!8.80e-08!10;CL:0000187!1.40e-07!54;CL:0002620!6.76e-07!23;CL:0000359!8.93e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002539;3.06e-08;10!CL:0000192;4.12e-07;43!CL:0000359;4.20e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.88e-10,43;CL:0000514,4.88e-10,43;CL:0002539,3.14e-08,10;CL:0000393,6.96e-08,61;CL:0000211,6.96e-08,61;CL:0000359,1.50e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;4.12e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@VAT1L | |||
}} | }} |
Latest revision as of 22:50, 17 September 2015
Short description: | p2@VAT1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VAT1L_5end |
Coexpression cluster: | C3590_teratocarcinoma_medulla_putamen_locus_astrocytoma_retina_caudate |
Association with transcript: | -13bp_to_ENST00000302536, NM_020927, uc002ffg.1_5end |
EntrezGene: | VAT1L |
HGNC: | 29315 |
UniProt: | Q9HCJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.88e-10 | 43 |
smooth muscle myoblast | 4.88e-10 | 43 |
aortic smooth muscle cell | 3.14e-08 | 10 |
electrically responsive cell | 6.96e-08 | 61 |
electrically active cell | 6.96e-08 | 61 |
vascular associated smooth muscle cell | 1.50e-07 | 32 |