FFCP PHASE1:Hg19::chr4:5890145..5890234,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:5890145..5890234,-
|short_description=p1@CRMP1
|description=CAGE_peak_1_at_CRMP1_5end
|association_with_transcript=0bp_to_ENST00000397890,ENST00000506216,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1400 | |EntrezGene=1400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2365 | |HGNC=2365 | ||
|TSSclassifier=strong | |||
|UniProt=Q14194 | |UniProt=Q14194 | ||
|association_with_transcript=0bp_to_ENST00000397890,ENST00000506216,ENST00000534845,uc003gip.2_5end | |||
|cluster_id=chr4:5890145..5890234,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_CRMP1_5end | |||
|id=chr4:5890145..5890234,- | |||
|ontology_enrichment_celltype=CL:0002319!7.62e-10!25;CL:0000133!5.80e-09!59;CL:0000047!9.19e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.95e-11;25!CL:0000540;5.04e-07;6!CL:0000404;5.04e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.99e-11,25;CL:0000133,9.93e-11,59;CL:0000047,5.76e-09,8;CL:0000333,1.24e-07,41;CL:0000540,5.07e-07,6;CL:0000031,5.07e-07,6;CL:0000404,5.07e-07,6;CL:0000221,8.22e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.24e-12;82!CL:0000031;5.04e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;6.61e-07;10!DOID:3095;6.93e-07;22!DOID:2994;6.93e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.19e-07,10;DOID:3095,7.34e-07,22;DOID:2994,7.34e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.78e-42!86;UBERON:0000073!5.78e-42!94;UBERON:0001016!5.78e-42!94;UBERON:0001017!2.08e-41!82;UBERON:0002346!5.65e-40!90;UBERON:0003075!1.24e-37!86;UBERON:0007284!1.24e-37!86;UBERON:0001049!7.53e-36!57;UBERON:0005068!7.53e-36!57;UBERON:0006241!7.53e-36!57;UBERON:0007135!7.53e-36!57;UBERON:0000955!3.58e-32!69;UBERON:0006238!3.58e-32!69;UBERON:0002616!7.22e-30!59;UBERON:0002780!1.94e-28!41;UBERON:0001890!1.94e-28!41;UBERON:0006240!1.94e-28!41;UBERON:0000924!3.34e-28!173;UBERON:0006601!3.34e-28!173;UBERON:0003080!2.94e-27!42;UBERON:0003056!5.30e-27!61;UBERON:0007023!9.98e-27!115;UBERON:0004121!2.99e-26!169;UBERON:0001893!5.30e-24!34;UBERON:0002020!8.88e-24!34;UBERON:0003528!8.88e-24!34;UBERON:0002791!2.46e-23!33;UBERON:0001869!2.84e-23!32;UBERON:0000153!3.65e-22!129;UBERON:0007811!3.65e-22!129;UBERON:0000033!4.16e-22!123;UBERON:0000956!3.97e-19!25;UBERON:0000203!3.97e-19!25;UBERON:0002619!6.09e-17!22;UBERON:0000119!8.63e-16!312;UBERON:0001950!1.03e-15!20;UBERON:0000064!3.33e-15!219;UBERON:0000481!3.80e-15!347;UBERON:0000483!3.83e-15!309;UBERON:0000475!6.78e-13!365;UBERON:0000025!1.77e-12!194;UBERON:0000922!8.46e-11!612;UBERON:0004111!9.93e-10!241;UBERON:0003076!1.33e-09!15;UBERON:0003057!1.33e-09!15;UBERON:0000477!1.35e-08!286;UBERON:0002050!1.87e-08!605;UBERON:0005423!1.87e-08!605;UBERON:0000923!4.02e-08!604;UBERON:0005291!4.02e-08!604;UBERON:0006598!4.02e-08!604;UBERON:0002532!4.02e-08!604;UBERON:0004732!4.83e-08!13;UBERON:0004733!6.05e-08!12;UBERON:0002028!6.05e-08!12;UBERON:0007277!6.05e-08!12;UBERON:0000468!7.01e-08!659;UBERON:0001871!6.21e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.22e-25;32!UBERON:0002791;1.18e-24;32!UBERON:0001893;1.40e-24;34!UBERON:0003528;1.86e-24;34!UBERON:0002020;1.86e-24;34!UBERON:0002780;2.85e-24;41!UBERON:0001890;2.85e-24;41!UBERON:0000073;1.64e-23;53!UBERON:0002616;1.64e-23;53!UBERON:0000956;1.53e-22;25!UBERON:0000203;1.53e-22;25!UBERON:0002619;6.28e-20;22!UBERON:0001950;1.85e-18;20!UBERON:0000955;5.42e-18;68!UBERON:0001017;6.28e-16;75!UBERON:0001016;6.40e-16;83!UBERON:0000922;1.39e-14;49!UBERON:0004732;2.79e-09;13!UBERON:0004733;3.60e-09;12!UBERON:0002028;3.60e-09;12!UBERON:0007023;5.36e-08;114!UBERON:0011216;7.50e-08;132!UBERON:0002680;1.35e-07;9!UBERON:0001895;1.35e-07;9!UBERON:0002420;1.69e-07;9!UBERON:0007245;1.69e-07;9!UBERON:0010009;1.69e-07;9!UBERON:0010011;1.69e-07;9!UBERON:0000454;1.69e-07;9!UBERON:0001871;2.87e-07;6!UBERON:0000125;4.78e-07;9!UBERON:0002308;4.78e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.96e-49,81;UBERON:0001016,2.43e-49,89;UBERON:0002346,6.56e-45,86;UBERON:0001049,6.47e-44,56;UBERON:0005068,6.47e-44,56;UBERON:0006241,6.47e-44,56;UBERON:0007135,6.47e-44,56;UBERON:0003075,3.87e-42,82;UBERON:0007284,3.87e-42,82;UBERON:0000073,9.12e-42,53;UBERON:0002616,9.12e-42,53;UBERON:0000955,2.33e-38,68;UBERON:0006238,2.33e-38,68;UBERON:0002780,1.15e-33,41;UBERON:0001890,1.15e-33,41;UBERON:0003080,1.15e-33,41;UBERON:0006240,1.15e-33,41;UBERON:0003056,3.45e-32,61;UBERON:0004121,6.91e-32,171;UBERON:0000924,6.91e-32,171;UBERON:0006601,6.91e-32,171;UBERON:0010371,9.76e-32,104;UBERON:0011216,4.94e-31,223;UBERON:0001893,2.33e-28,34;UBERON:0003528,4.31e-28,34;UBERON:0002020,4.31e-28,34;UBERON:0001869,1.73e-27,32;UBERON:0002791,6.02e-27,32;UBERON:0007023,5.81e-26,114;UBERON:0010314,7.80e-26,132;UBERON:0000956,1.56e-22,25;UBERON:0000203,1.56e-22,25;UBERON:0002619,6.39e-20,22;UBERON:0001950,1.87e-18,20;UBERON:0000025,7.03e-14,192;UBERON:0000119,2.47e-12,309;UBERON:0000483,1.05e-11,306;UBERON:0003076,3.69e-11,15;UBERON:0003057,3.69e-11,15;UBERON:0000922,5.95e-11,592;UBERON:0004111,5.34e-10,240;UBERON:0004732,2.68e-09,13;UBERON:0004733,3.50e-09,12;UBERON:0002028,3.50e-09,12;UBERON:0007277,3.50e-09,12;UBERON:0005423,7.97e-08,581;UBERON:0002680,1.34e-07,9;UBERON:0001895,1.34e-07,9;UBERON:0010092,1.34e-07,9;UBERON:0002420,1.62e-07,9;UBERON:0007245,1.62e-07,9;UBERON:0010009,1.62e-07,9;UBERON:0010011,1.62e-07,9;UBERON:0000454,1.62e-07,9;UBERON:0001871,2.78e-07,6;UBERON:0002050,3.21e-07,564;UBERON:0000923,3.47e-07,560;UBERON:0010316,3.47e-07,560;UBERON:0005291,3.47e-07,560;UBERON:0006598,3.47e-07,560;UBERON:0010317,3.47e-07,560;UBERON:0002532,3.47e-07,560;UBERON:0000125,4.68e-07,9;UBERON:0002308,4.68e-07,9 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.245733936501509,2.79120467188971,0,0,0,0,0.672325146451775,0,0,0,43.2154913849526,5.30401797235058,89.0211408997769,55.529781503425,47.3585510752179,59.2561258887469,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0.889509253863555,0.426730222566507,0.400395987036012,0,0.661044872784862,0,0,0,0.382273228125229,0,0,1.84368859342554,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,13.9370192409448,0,1.50401373190767,0.289693037921647,2.3858578411533,0,2.55244006342983,0.443458794925128,6.23626978421195,11.3296900305521,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,1.70843440283719,0,0,0,0,0,0,0,1.28241220751285,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0.756787138224657,0,0.70296429550139,0,0,0,0.117434498643765,0.323745888736263,0.98315564691574,0,0.859840221182376,0,0,0,0,0,3.19838616512726,1.7516592782075,0,0,0,0,2.1552114800404,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.5194807859889,59.5058659763469,44.7346680047646,36.2813692553797,44.4084697541106,47.8120340389337,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,8.41450642820675,15.2282384192618,2.94017422771084,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,4.88712457965487,0,1.44331342025273,41.7349457910277,5.9878434060269,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0.207328115540772,0,0,2.03193261734941,4.58386110669933,15.2382681373061,3.4214489204541,1.23392991243988,3.60411669412701,0.285826432630578,1.12131084345361,6.97536110133248,1.24675085895615,0.904902010304444,0,0,0,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0,0,0,0,0,5.72734816413214,10.4584015032035,5.29856853264902,0,0,0,0,0,0,0.723906533337896,0.410952645100767,1.61154866915906,0,0,0,0,95.5395787076462,248.567120868057,219.614022828865,356.642128896829,288.34831574723,0,0,0,0,1.00034104211935,0,0,0,0,0,0.300946099727719,0,5.17365356462525,0,0,0,1.37060810223918,16.1277409191102,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,1.37777337797528,0,1.70461739447251,8.12159303233341,5.39107359730903,4.70609861506113,2.92278449306521,1.79437769117889,2.27466768141793,2.38131187387122,0.647747748306418,0,7.85744668877173,14.5490034417907,0,0,0.671624264166535,0,0,1.28225062558195,1.96808787419823,1.30151357865721,1.33953315142039,0,0,0,0,0,2.70678011217942,0.308097234229289,0.767518373630648,5.92697261683481,0,1.74020032697074,6.64767693845587,19.8541439492224,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,2.74537029736055,2.23843564456804,0,0,0,2.43816869544795,0,0,0.272999822815972,0,0,0.551365343546124,0,0,0,1.31178950409327,0.202910376962704,1.54911749049875,0.563391205064483,2.86822704408103,2.84922218938051,0,0.354761064070598,0.422215270595328,0,1.13841952129715,0,0,0,0,1.22386941009813,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,6.73735898684351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,7.16027078322129,0,7.10340367016033,0,0.296964680832639,0,41.7542012061845,46.1395685826482,0.111308705022906,0,4.85588438694385,1.9924798825107,1.10513566212459,55.4252045279407,0.715880777515084,0,0,0,0,0,1.1837208676432,0,0,83.3626161641888,40.9107312893764,980.103748185863,0,0,0,3.30001000027949,0,0,19.6503722747635,56.8628996097346,73.096122866916,23.9150174169737,34.4905814468667,21.3614430843917,29.0823453619121,57.3362380769882,52.4331099197994,0.544692317594951,26.0722401800988,6.23297093880756,11.0523794171591,0,0,0,1.5950057986596,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,1.99052386215701,1.59223616106011,6.72133159426988,0,0,0,15.8392662504591,16.0515529459758,24.8320312468859,0,3.91329237864179,0,1.97292201424695,26.6179575307061,523.384422388138,2.27471686662557,0.901940516486955,0.207376382794494,7.31119259977904,0.661983911750998,6.90652420495896,2.38944859545918,0,2.35746944122336,0,0,0,1.04836000945218,0,0,0,0,1.26085721434945,0,47.0039940823508,0,0,48.1795157224237,0.586654148204409,0,2.34798294213288,9.99048047910651,2.16135625731159,25.9998073296629,9.09453488668412,0,0.248505071130865,0,58.438808611654,46.0252523774266,28.6614991558064,0,20.4142898161328,6.43455280792367,1.27746588066972,0,0,2.23425921017803,0.916641696046735,2.15361907373044,1.19807400299395,0.858452096273142,1.56220020209311,7.86046628094697,0,0,0.0787831823072236,0,0,0.0984274815147488,0,34.1948766618,32.2802072484434,51.1195012118761,41.6744492889618,48.1910792113855,0,0,64.6982778407963,0,0.315222829196793,8.96973457108468,0,0,0,2.85878130549347,0,0,1.08599920350743,0,0,1.19730191562487,0.082092520749339,0,1.47305718976163,0,1.32506888912221,10.8597683343702,13.4877253777544,0.6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| ||
|short_description=p1@CRMP1 | |||
}} | }} |
Latest revision as of 04:00, 18 September 2015
Short description: | p1@CRMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRMP1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000397890, ENST00000506216, ENST00000534845, uc003gip.2_5end |
EntrezGene: | CRMP1 |
HGNC: | 2365 |
UniProt: | Q14194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.99e-11 | 25 |
neurectodermal cell | 9.93e-11 | 59 |
neuronal stem cell | 5.76e-09 | 8 |
migratory neural crest cell | 1.24e-07 | 41 |
neuron | 5.07e-07 | 6 |
neuroblast | 5.07e-07 | 6 |
electrically signaling cell | 5.07e-07 | 6 |
ectodermal cell | 8.22e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.19e-07 | 10 |
germ cell and embryonal cancer | 7.34e-07 | 22 |
germ cell cancer | 7.34e-07 | 22 |