FFCP PHASE1:Hg19::chr15:68871361..68871409,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:68871361..68871409,+
|short_description=p1@CORO2B
|description=CAGE_peak_1_at_CORO2B_5end
|association_with_transcript=53bp_to_ENST00000261861,NM_006091_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10391 | |EntrezGene=10391 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2256 | |HGNC=2256 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQ03 | |UniProt=Q9UQ03 | ||
|association_with_transcript=53bp_to_ENST00000261861,NM_006091_5end | |||
|cluster_id=chr15:68871361..68871409,+ | |||
|coexpression_cluster_id=C2345 | |||
|description=CAGE_peak_1_at_CORO2B_5end | |||
|id=chr15:68871361..68871409,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-20!180;CL:0000393!5.08e-15!60;CL:0000211!5.08e-15!60;CL:0000183!6.28e-15!59;CL:0000680!5.53e-14!57;CL:0000056!5.53e-14!57;CL:0000355!5.53e-14!57;CL:0000187!1.99e-13!54;CL:0000192!7.91e-11!42;CL:0000514!7.91e-11!42;CL:0000222!1.09e-10!119;CL:0000359!3.52e-09!32;CL:0000220!1.24e-08!246;CL:0002321!1.30e-08!248;CL:0000133!7.35e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.10e-09;32!CL:0000393;2.93e-08;61!CL:0000211;2.93e-08;61!CL:0000192;3.11e-08;43!CL:0000187;1.01e-07;55!CL:0002319;9.99e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,5.90e-15,61;CL:0000211,5.90e-15,61;CL:0000680,7.75e-14,58;CL:0000056,7.75e-14,58;CL:0000355,7.75e-14,58;CL:0000187,3.22e-13,55;CL:0000192,6.89e-11,43;CL:0000514,6.89e-11,43;CL:0000222,8.34e-10,121;CL:0000359,2.64e-09,32;CL:0000133,2.27e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000514;3.11e-08;43!CL:0000355;9.04e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.26e-19;34!UBERON:0003528;3.88e-19;34!UBERON:0002020;3.88e-19;34!UBERON:0002791;5.71e-19;32!UBERON:0001869;6.66e-19;32!UBERON:0000073;1.43e-17;53!UBERON:0002616;1.43e-17;53!UBERON:0002780;2.13e-16;41!UBERON:0001890;2.13e-16;41!UBERON:0000956;6.49e-16;25!UBERON:0000203;6.49e-16;25!UBERON:0001017;2.23e-14;75!UBERON:0002619;4.72e-14;22!UBERON:0000955;1.87e-13;68!UBERON:0001950;6.41e-13;20!UBERON:0001016;1.08e-12;83!UBERON:0004732;3.23e-10;13!UBERON:0004573;7.04e-10;33!UBERON:0004571;7.04e-10;33!UBERON:0004733;1.95e-09;12!UBERON:0002028;1.95e-09;12!UBERON:0001637;2.18e-09;42!UBERON:0003509;2.18e-09;42!UBERON:0004572;2.18e-09;42!UBERON:0000125;7.18e-08;9!UBERON:0002308;7.18e-08;9!UBERON:0002420;1.37e-07;9!UBERON:0007245;1.37e-07;9!UBERON:0010009;1.37e-07;9!UBERON:0010011;1.37e-07;9!UBERON:0000454;1.37e-07;9!UBERON:0002680;1.78e-07;9!UBERON:0001895;1.78e-07;9 | |||
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| ||
|short_description=p1@CORO2B | |||
}} | }} |
Latest revision as of 18:53, 18 September 2015
Short description: | p1@CORO2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CORO2B_5end |
Coexpression cluster: | C2345_optic_Neural_parietal_spinal_Myoblast_locus_globus |
Association with transcript: | 53bp_to_ENST00000261861, NM_006091_5end |
EntrezGene: | CORO2B |
HGNC: | 2256 |
UniProt: | Q9UQ03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 5.90e-15 | 61 |
electrically active cell | 5.90e-15 | 61 |
muscle precursor cell | 7.75e-14 | 58 |
myoblast | 7.75e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.75e-14 | 58 |
muscle cell | 3.22e-13 | 55 |
smooth muscle cell | 6.89e-11 | 43 |
smooth muscle myoblast | 6.89e-11 | 43 |
mesodermal cell | 8.34e-10 | 121 |
vascular associated smooth muscle cell | 2.64e-09 | 32 |
neurectodermal cell | 2.27e-07 | 59 |