FFCP PHASE1:Hg19::chr5:83680603..83680617,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:83680603..83680617,- to FFCP PHASE1:Hg19::chr5:83680603..83680617,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10085 | |EntrezGene=10085 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3173 | |HGNC=3173 | ||
|TSSclassifier=strong | |||
|UniProt=O43854,Q8N610 | |UniProt=O43854,Q8N610 | ||
|association_with_transcript=0bp_to_ENST00000296591,NM_005711,uc003kio.1,uc003kip.1_5end | |||
|cluster_id=chr5:83680603..83680617,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_EDIL3_5end | |||
|id=chr5:83680603..83680617,- | |||
|ontology_enrichment_celltype=CL:0000055!3.26e-19!180;CL:0000359!2.44e-10!32;CL:0000393!6.82e-09!60;CL:0000211!6.82e-09!60;CL:0000680!1.72e-08!57;CL:0000056!1.72e-08!57;CL:0000355!1.72e-08!57;CL:0000183!1.92e-08!59;CL:0000192!2.92e-08!42;CL:0000514!2.92e-08!42;CL:0000187!4.45e-08!54 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.36e-10;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.33e-11,32;CL:0000393,7.95e-09,61;CL:0000211,7.95e-09,61;CL:0000192,1.42e-08,43;CL:0000514,1.42e-08,43;CL:0000680,2.11e-08,58;CL:0000056,2.11e-08,58;CL:0000355,2.11e-08,58;CL:0000187,5.72e-08,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.22e-34!82;UBERON:0005743!4.71e-34!86;UBERON:0000073!8.08e-33!94;UBERON:0001016!8.08e-33!94;UBERON:0000955!2.68e-31!69;UBERON:0006238!2.68e-31!69;UBERON:0002616!3.35e-28!59;UBERON:0001049!1.24e-27!57;UBERON:0005068!1.24e-27!57;UBERON:0006241!1.24e-27!57;UBERON:0007135!1.24e-27!57;UBERON:0000025!1.35e-26!194;UBERON:0003075!1.65e-26!86;UBERON:0007284!1.65e-26!86;UBERON:0002346!2.48e-26!90;UBERON:0000475!3.99e-25!365;UBERON:0000477!6.75e-25!286;UBERON:0000033!3.97e-23!123;UBERON:0000481!8.25e-22!347;UBERON:0000153!3.25e-21!129;UBERON:0007811!3.25e-21!129;UBERON:0004111!3.62e-21!241;UBERON:0000924!1.12e-20!173;UBERON:0006601!1.12e-20!173;UBERON:0004121!1.80e-20!169;UBERON:0000119!7.06e-20!312;UBERON:0002780!8.48e-20!41;UBERON:0001890!8.48e-20!41;UBERON:0006240!8.48e-20!41;UBERON:0003080!1.27e-19!42;UBERON:0000483!1.39e-19!309;UBERON:0001893!6.37e-19!34;UBERON:0002020!6.56e-19!34;UBERON:0003528!6.56e-19!34;UBERON:0002791!2.84e-18!33;UBERON:0001869!1.64e-17!32;UBERON:0003056!3.04e-17!61;UBERON:0007023!1.07e-15!115;UBERON:0000468!2.30e-15!659;UBERON:0002619!1.04e-13!22;UBERON:0000956!3.09e-13!25;UBERON:0000203!3.09e-13!25;UBERON:0001950!1.77e-12!20;UBERON:0000922!3.41e-12!612;UBERON:0000467!3.16e-11!625;UBERON:0002050!3.69e-11!605;UBERON:0005423!3.69e-11!605;UBERON:0000923!4.41e-11!604;UBERON:0005291!4.41e-11!604;UBERON:0006598!4.41e-11!604;UBERON:0002532!4.41e-11!604;UBERON:0000480!5.31e-11!626;UBERON:0000064!1.37e-10!219;UBERON:0003076!3.41e-09!15;UBERON:0003057!3.41e-09!15;UBERON:0001637!2.18e-08!42;UBERON:0003509!2.18e-08!42;UBERON:0004572!2.18e-08!42;UBERON:0004872!2.72e-08!84;UBERON:0001134!3.41e-08!61;UBERON:0002036!3.41e-08!61;UBERON:0003082!3.41e-08!61;UBERON:0002385!3.78e-08!63;UBERON:0001015!3.78e-08!63;UBERON:0000383!3.78e-08!63;UBERON:0003914!4.93e-08!118;UBERON:0004732!5.45e-08!13;UBERON:0000062!6.32e-08!511;UBERON:0002049!1.40e-07!79;UBERON:0007798!1.40e-07!79;UBERON:0000914!1.49e-07!83;UBERON:0002329!1.49e-07!83;UBERON:0003077!1.49e-07!83;UBERON:0003059!1.49e-07!83;UBERON:0007282!1.49e-07!83;UBERON:0009618!1.49e-07!83;UBERON:0007285!1.49e-07!83;UBERON:0005256!1.73e-07!143;UBERON:0004573!2.62e-07!33;UBERON:0004571!2.62e-07!33;UBERON:0004733!2.70e-07!12;UBERON:0002028!2.70e-07!12;UBERON:0007277!2.70e-07!12;UBERON:0002308!3.01e-07!9;UBERON:0000125!3.01e-07!9;UBERON:0002420!5.33e-07!9;UBERON:0007245!5.33e-07!9;UBERON:0010009!5.33e-07!9;UBERON:0010011!5.33e-07!9;UBERON:0000454!5.33e-07!9;UBERON:0001981!5.71e-07!60;UBERON:0007500!5.71e-07!60;UBERON:0004537!5.71e-07!60;UBERON:0006965!5.71e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.80e-17;34!UBERON:0003528;5.86e-17;34!UBERON:0002020;5.86e-17;34!UBERON:0002791;1.04e-16;32!UBERON:0001869;1.12e-16;32!UBERON:0000073;2.19e-15;53!UBERON:0002616;2.19e-15;53!UBERON:0002780;3.03e-15;41!UBERON:0001890;3.03e-15;41!UBERON:0001017;1.16e-14;75!UBERON:0002619;1.99e-14;22!UBERON:0000955;3.72e-14;68!UBERON:0000956;6.47e-14;25!UBERON:0000203;6.47e-14;25!UBERON:0001950;4.05e-13;20!UBERON:0001016;6.60e-12;83!UBERON:0004732;2.10e-08;13!UBERON:0004733;1.15e-07;12!UBERON:0002028;1.15e-07;12!UBERON:0000125;1.35e-07;9!UBERON:0002308;1.35e-07;9!UBERON:0002420;2.51e-07;9!UBERON:0007245;2.51e-07;9!UBERON:0010009;2.51e-07;9!UBERON:0010011;2.51e-07;9!UBERON:0000454;2.51e-07;9!UBERON:0004573;8.76e-07;33!UBERON:0004571;8.76e-07;33 | |||
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|phase1_expression=10.5373459976923,10.0627246228762,38.3395979141042,24.0175916047513,42.4613039705923,12.2127393374052,37.9949817252466,0,1.30592814099919,0.737201809504527,0,0,0,12.3766352960047,9.94192127183747,19.4974292471015,24.7104756489831,21.1789926212338,29.2759679274304,11.6965005172949,22.0320746543793,32.5992910337211,6.01095572975219,3.96935832711364,6.02604670055053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,5.36560687762909,12.2748059369789,29.2765713431499,44.1177361359583,40.267332271109,22.2680065174308,56.4496449551058,10.0206906193912,23.5033161310318,27.1409487791759,20.7601834663875,0,0,0.324547393654683,0,0,0,0,0,1.19257444420023,3.4409383804245,1.38856200643038,2.82653970962005,1.25849830862972,0.550236083880135,2.08994966536811,0,0.35576626268671,1.00416183829401,0,0,0,2.57364156242108,0.81014194788176,1.42879565254528,1.57170560838319,0.900891843866578,4.5994991239765,0,4.21364011039937,0,0,0,65.600297623782,22.0337090296369,28.3355646940288,43.8860029745685,13.1227301413392,40.9294648103884,34.1596786335056,79.6736181387427,12.1372303805909,9.69916838901754,5.06731899651722,22.4008992914498,42.0608424870399,0.234321431833797,0.312160076830321,0,0,0.23486899728753,0.323745888736263,0,0.61246251376468,0.737005903870608,1.13658359293342,36.8280885757437,29.4247645841483,0,1.43723628363248,1.0100166837244,1.50142223846357,0.831192346452549,19.7539929396377,23.2930724807255,50.9307019693363,12.1372435981223,10.0458195985763,30.9658213786923,4.87443372666992,13.8041904198825,9.58388521917482,3.09168648054755,6.70020682793723,10.6329089311998,5.84622030967192,2.27190396819703,13.7154348977026,2.90962902273861,37.2760072142445,15.9188315199672,3.89989362314122,0.193260853163297,0.272746120590835,0,5.48881677583179,5.96383957446684,6.39066685782351,4.97573064073778,5.04641701751257,4.74470566798579,3.12899064659632,9.00537313470039,4.14404764057442,14.8597736970233,5.77503585335668,3.31259040111563,3.37169380156203,3.13314338848527,4.30146493656336,2.61455332910887,3.79632990577755,2.15730093056263,3.33576490713088,4.61696588335668,0,4.20725321410337,8.231480226628,5.88034845542168,0,0,2.36315962672562,0,0.122988438543114,15.4411029268673,0,0,0,0,0.325808305310325,0,21.649701303791,3.24605133930215,148.521998208314,1.58803092537181,0,1.90254152234598,0,0,0,0,0,0.93733833986777,0.16798212819886,0.425325291727159,0.179117045405697,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,3.1396703616701,9.15516144549888,4.62031200671985,61.1455215534289,0,0.845302752556,17.8178538111863,7.28052058379563,1.02882949704857,5.67396528093113,0.532844358032199,28.1666647506551,8.68194568626309,9.05564370458846,0.325736184293735,30.5637075918589,4.75171123760058,19.8949988859327,47.9343402230162,10.3971910829339,0,0,0,25.6398595375993,20.6751484501405,27.1010119577365,18.8215698667853,4.52047909610843,8.77398719875488,0,0,0,0,3.55732473911449,6.50699269288109,17.0123538811093,12.7312361654105,9.56908127479745,0,0,0,11.41030872988,7.50255781589516,15.1908413271852,30.5717166450286,14.9880350589616,30.4365661015494,0.819989904948992,31.9002865711382,38.6592756895174,12.4167685551006,35.8681823209136,31.3427586520895,0,6.2656370388077,5.83343820478455,0,0,0,0,1.66435439510497,1.81434175997808,8.18755765801964,37.5981834555753,14.5943249105198,14.3515847166385,38.8897509290695,37.4789636264605,4.45254199334973,0.462629081407967,0.710246901252508,1.88892458831761,1.55776328755086,0.697262270759755,0.483437798366489,1.60405176242628,0.0920809889358963,1.03333003348146,0,0.262248829918848,6.76799419361118,19.9469723100434,8.62784746094541,8.76835347919564,28.7100430588622,0,1.02056223165909,17.057357372069,4.62681758070868,14.3601611898242,9.53210570324221,0.254876273045038,1.66215201785745,4.25362033972139,0,0,1.02580050046556,3.60816110269676,10.0867302345934,1.854738209659,17.7644761747586,19.7197704810205,0,0,25.7094287750655,2.90012154876366,0.770243085573222,1.07452572308291,1.37836572484531,0.322260734604821,1.74020032697074,1.02271952899321,9.43739577855416,0.330569830721956,0.576570202095319,0.255225424989168,0.4046311234222,2.78907329578371,53.2032866143782,9.0614845120878,4.62050370264133,10.6461206063404,20.8783918098017,17.2351523766646,14.1693637874571,27.1675609632557,100.925036485274,48.2294390627277,4.09436466098134,6.41908482050881,8.27328444607436,7.06453776179307,4.67668389716618,4.39259247577688,5.1837457032102,12.3331313759723,7.92551605865041,13.9015290558864,0.975267478179181,27.2959108387039,17.9605249486484,0,4.24216295861138,19.2113798254413,35.2873819869519,21.8934861829602,24.5532495742107,3.47265320560013,1.9676842561399,56.0032640417063,8.0554109505935,10.4227372936929,12.6201989939565,44.8015627019833,47.4372498470063,0,12.0331352119669,0.987884678879706,0.379473173765715,1.7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| ||
|short_description=p2@EDIL3 | |||
}} | }} |
Latest revision as of 01:26, 19 September 2015
Short description: | p2@EDIL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EDIL3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000296591, NM_005711, uc003kio.1, uc003kip.1_5end |
EntrezGene: | EDIL3 |
HGNC: | 3173 |
UniProt: | O43854Q8N610 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.33e-11 | 32 |
electrically responsive cell | 7.95e-09 | 61 |
electrically active cell | 7.95e-09 | 61 |
smooth muscle cell | 1.42e-08 | 43 |
smooth muscle myoblast | 1.42e-08 | 43 |
muscle precursor cell | 2.11e-08 | 58 |
myoblast | 2.11e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.11e-08 | 58 |
muscle cell | 5.72e-08 | 55 |