FFCP PHASE1:Hg19::chr6:11537910..11537953,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:11537910..11537953,+ to FFCP PHASE1:Hg19::chr6:11537910..11537953,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100113407 | |EntrezGene=100113407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34244 | |HGNC=34244 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000543875_5end | |||
|cluster_id=chr6:11537910..11537953,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_TMEM170B_5end | |||
|id=chr6:11537910..11537953,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.59e-15!76;CL:0002194!1.49e-12!63;CL:0000576!1.49e-12!63;CL:0000040!1.49e-12!63;CL:0000559!1.49e-12!63;CL:0000557!3.95e-12!71;CL:0002057!6.81e-12!42;CL:0000839!1.57e-11!70;CL:0002009!2.22e-11!65;CL:0000860!2.82e-11!45;CL:0000763!1.93e-10!112;CL:0000049!1.93e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.53e-09;48!CL:0000766;1.90e-08;69!CL:0000473;1.45e-07;39!CL:0000234;1.45e-07;39!CL:0000860;2.49e-07;33!CL:0002057;2.49e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.80e-17,72;CL:0000557,4.43e-14,67;CL:0002194,4.71e-14,59;CL:0000576,4.71e-14,59;CL:0000040,4.71e-14,59;CL:0000559,4.71e-14,59;CL:0000473,1.14e-13,48;CL:0000234,1.14e-13,48;CL:0000839,1.42e-13,66;CL:0002009,5.90e-13,61;CL:0000763,1.23e-12,108;CL:0000049,1.23e-12,108;CL:0000860,2.68e-12,42;CL:0002057,2.68e-12,42 | |||
|ontology_enrichment_development_v019=CL:0002057;4.80e-09;42!UBERON:0006601;2.37e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.85e-33!94;UBERON:0001016!5.85e-33!94;UBERON:0005743!1.66e-31!86;UBERON:0001017!4.49e-30!82;UBERON:0007023!6.71e-30!115;UBERON:0001049!1.03e-28!57;UBERON:0005068!1.03e-28!57;UBERON:0006241!1.03e-28!57;UBERON:0007135!1.03e-28!57;UBERON:0000955!3.83e-25!69;UBERON:0006238!3.83e-25!69;UBERON:0002780!1.38e-24!41;UBERON:0001890!1.38e-24!41;UBERON:0006240!1.38e-24!41;UBERON:0002616!1.44e-24!59;UBERON:0002346!8.75e-24!90;UBERON:0003080!3.81e-23!42;UBERON:0003075!2.40e-22!86;UBERON:0007284!2.40e-22!86;UBERON:0001893!2.40e-21!34;UBERON:0002020!3.20e-21!34;UBERON:0003528!3.20e-21!34;UBERON:0002791!1.21e-20!33;UBERON:0001869!2.30e-20!32;UBERON:0003056!1.42e-17!61;UBERON:0000956!2.50e-16!25;UBERON:0000203!2.50e-16!25;UBERON:0002619!2.57e-15!22;UBERON:0001950!4.29e-14!20;UBERON:0000924!5.37e-14!173;UBERON:0006601!5.37e-14!173;UBERON:0004121!6.52e-13!169;UBERON:0000033!7.40e-13!123;UBERON:0000153!1.75e-12!129;UBERON:0007811!1.75e-12!129;UBERON:0002390!2.10e-10!102;UBERON:0003061!2.10e-10!102;UBERON:0001474!1.07e-09!86;UBERON:0002371!3.31e-09!80;UBERON:0002193!8.60e-09!112;UBERON:0004765!8.07e-08!101;UBERON:0001434!8.07e-08!101;UBERON:0003076!7.68e-07!15;UBERON:0003057!7.68e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.26e-21;32!UBERON:0001893;1.33e-21;34!UBERON:0003528;2.16e-21;34!UBERON:0002020;2.16e-21;34!UBERON:0002791;2.24e-21;32!UBERON:0002780;8.30e-21;41!UBERON:0001890;8.30e-21;41!UBERON:0000956;5.54e-19;25!UBERON:0000203;5.54e-19;25!UBERON:0000073;1.36e-18;53!UBERON:0002616;1.36e-18;53!UBERON:0002619;8.04e-18;22!UBERON:0001950;2.16e-16;20!UBERON:0001016;3.06e-13;83!UBERON:0000955;3.79e-13;68!UBERON:0001017;6.65e-13;75!UBERON:0007023;5.50e-09;114!UBERON:0002420;2.21e-07;9!UBERON:0007245;2.21e-07;9!UBERON:0010009;2.21e-07;9!UBERON:0010011;2.21e-07;9!UBERON:0000454;2.21e-07;9!UBERON:0000125;3.30e-07;9!UBERON:0002308;3.30e-07;9 | |||
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|short_description=p2@TMEM170B | |||
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Latest revision as of 00:16, 20 September 2015
Short description: | p2@TMEM170B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM170B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000543875_5end |
EntrezGene: | TMEM170B |
HGNC: | 34244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.80e-17 | 72 |
granulocyte monocyte progenitor cell | 4.43e-14 | 67 |
monopoietic cell | 4.71e-14 | 59 |
monocyte | 4.71e-14 | 59 |
monoblast | 4.71e-14 | 59 |
promonocyte | 4.71e-14 | 59 |
defensive cell | 1.14e-13 | 48 |
phagocyte | 1.14e-13 | 48 |
myeloid lineage restricted progenitor cell | 1.42e-13 | 66 |
macrophage dendritic cell progenitor | 5.90e-13 | 61 |
myeloid cell | 1.23e-12 | 108 |
common myeloid progenitor | 1.23e-12 | 108 |
classical monocyte | 2.68e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.68e-12 | 42 |