FFCP PHASE1:Hg19::chr19:589894..589911,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=610 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4846 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UL51 | |||
|association_with_transcript=1bp_to_ENST00000251287,NM_001194,uc002lpe.2_5end | |||
|cluster_id=chr19:589894..589911,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_HCN2_5end | |||
|id=chr19:589894..589911,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.30e-19;82!UBERON:0010122;3.09e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.44e-50!57;UBERON:0005068!2.44e-50!57;UBERON:0006241!2.44e-50!57;UBERON:0007135!2.44e-50!57;UBERON:0000955!6.44e-50!69;UBERON:0006238!6.44e-50!69;UBERON:0001017!4.51e-47!82;UBERON:0005743!7.36e-46!86;UBERON:0002616!1.33e-45!59;UBERON:0000073!1.28e-44!94;UBERON:0001016!1.28e-44!94;UBERON:0003075!4.21e-44!86;UBERON:0007284!4.21e-44!86;UBERON:0002346!2.67e-41!90;UBERON:0002780!2.36e-36!41;UBERON:0001890!2.36e-36!41;UBERON:0006240!2.36e-36!41;UBERON:0003080!3.21e-35!42;UBERON:0002020!5.25e-32!34;UBERON:0003528!5.25e-32!34;UBERON:0001893!6.08e-32!34;UBERON:0000033!7.11e-31!123;UBERON:0002791!1.93e-30!33;UBERON:0003056!5.16e-30!61;UBERON:0001869!3.50e-29!32;UBERON:0000153!1.52e-28!129;UBERON:0007811!1.52e-28!129;UBERON:0004121!1.30e-27!169;UBERON:0000924!1.78e-26!173;UBERON:0006601!1.78e-26!173;UBERON:0007023!1.83e-25!115;UBERON:0002619!7.02e-23!22;UBERON:0001950!3.57e-20!20;UBERON:0000956!1.81e-19!25;UBERON:0000203!1.81e-19!25;UBERON:0003076!7.16e-16!15;UBERON:0003057!7.16e-16!15;UBERON:0002308!6.86e-15!9;UBERON:0000125!6.86e-15!9;UBERON:0004733!1.38e-14!12;UBERON:0002028!1.38e-14!12;UBERON:0007277!1.38e-14!12;UBERON:0002420!1.78e-14!9;UBERON:0007245!1.78e-14!9;UBERON:0010009!1.78e-14!9;UBERON:0010011!1.78e-14!9;UBERON:0000454!1.78e-14!9;UBERON:0004732!3.22e-13!13;UBERON:0000025!9.65e-13!194;UBERON:0009663!8.73e-12!7;UBERON:0000119!5.81e-11!312;UBERON:0000064!1.72e-10!219;UBERON:0002680!1.76e-10!9;UBERON:0001895!1.76e-10!9;UBERON:0010092!1.76e-10!9;UBERON:0000475!1.82e-10!365;UBERON:0000200!1.93e-10!6;UBERON:0000483!2.66e-10!309;UBERON:0002298!3.81e-10!8;UBERON:0000477!8.22e-10!286;UBERON:0001871!1.24e-09!7;UBERON:0000349!1.35e-08!5;UBERON:0004111!1.51e-08!241;UBERON:0000481!1.61e-08!347;UBERON:0000062!2.91e-08!511;UBERON:0000369!1.34e-07!4;UBERON:0002435!1.34e-07!4;UBERON:0000204!1.34e-07!4;UBERON:0010082!1.34e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.18e-70;34!UBERON:0003528;4.61e-69;34!UBERON:0002020;4.61e-69;34!UBERON:0001869;9.20e-66;32!UBERON:0002791;1.97e-65;32!UBERON:0002780;5.16e-60;41!UBERON:0001890;5.16e-60;41!UBERON:0000073;2.35e-56;53!UBERON:0002616;2.35e-56;53!UBERON:0002619;7.98e-52;22!UBERON:0001950;4.90e-50;20!UBERON:0000956;1.99e-45;25!UBERON:0000203;1.99e-45;25!UBERON:0000125;2.91e-43;9!UBERON:0002308;2.91e-43;9!UBERON:0000955;2.52e-37;68!UBERON:0001017;2.34e-34;75!UBERON:0009663;1.17e-33;7!UBERON:0002420;1.30e-33;9!UBERON:0007245;1.30e-33;9!UBERON:0010009;1.30e-33;9!UBERON:0010011;1.30e-33;9!UBERON:0000454;1.30e-33;9!UBERON:0000200;4.04e-29;6!UBERON:0001016;3.09e-25;83!UBERON:0002298;1.08e-20;6!UBERON:0000369;1.80e-20;4!UBERON:0002435;1.80e-20;4!UBERON:0000204;1.80e-20;4!UBERON:0007023;2.21e-17;114!UBERON:0001872;6.24e-17;5!UBERON:0000988;5.72e-16;3!UBERON:0005383;7.35e-16;3!UBERON:0005382;7.35e-16;3!UBERON:0001870;1.18e-14;3!UBERON:0004733;1.84e-14;12!UBERON:0002028;1.84e-14;12!UBERON:0004732;2.65e-13;13!UBERON:0011216;8.15e-13;132!UBERON:0001871;2.14e-11;6!UBERON:0002148;2.40e-11;2!UBERON:0006331;2.40e-11;2!UBERON:0009662;2.40e-11;2!UBERON:0001873;3.09e-11;2!UBERON:0002771;1.16e-10;2!UBERON:0001897;1.16e-10;2!UBERON:0001875;1.16e-10;2!UBERON:0006514;1.16e-10;2!UBERON:0010225;1.16e-10;2!UBERON:0002702;2.42e-10;2!UBERON:0002021;6.39e-10;5!UBERON:0000349;2.27e-09;5!UBERON:0002680;3.31e-09;9!UBERON:0001895;3.31e-09;9!UBERON:0010314;9.83e-08;132!UBERON:0001896;2.20e-07;3!UBERON:0005290;2.20e-07;3!UBERON:0001894;5.83e-07;7!UBERON:0002581;9.90e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.92e-100,56;UBERON:0005068,6.92e-100,56;UBERON:0006241,6.92e-100,56;UBERON:0007135,6.92e-100,56;UBERON:0000073,1.16e-99,53;UBERON:0002616,1.16e-99,53;UBERON:0002780,1.94e-86,41;UBERON:0001890,1.94e-86,41;UBERON:0003080,1.94e-86,41;UBERON:0006240,1.94e-86,41;UBERON:0000955,4.64e-85,68;UBERON:0006238,4.64e-85,68;UBERON:0003528,5.43e-83,34;UBERON:0002020,5.43e-83,34;UBERON:0001893,8.34e-83,34;UBERON:0001017,2.36e-79,81;UBERON:0001869,2.04e-74,32;UBERON:0002791,5.77e-74,32;UBERON:0001016,6.78e-71,89;UBERON:0003075,1.99e-66,82;UBERON:0007284,1.99e-66,82;UBERON:0002346,4.72e-63,86;UBERON:0003056,1.42e-56,61;UBERON:0007023,7.96e-56,114;UBERON:0002619,8.92e-52,22;UBERON:0010371,4.82e-51,104;UBERON:0001950,5.59e-50,20;UBERON:0000956,2.20e-45,25;UBERON:0000203,2.20e-45,25;UBERON:0000125,4.69e-43,9;UBERON:0002308,4.69e-43,9;UBERON:0010314,2.55e-41,132;UBERON:0004121,4.43e-34,171;UBERON:0000924,4.43e-34,171;UBERON:0006601,4.43e-34,171;UBERON:0009663,2.45e-33,7;UBERON:0002420,2.67e-33,9;UBERON:0007245,2.67e-33,9;UBERON:0010009,2.67e-33,9;UBERON:0010011,2.67e-33,9;UBERON:0000454,2.67e-33,9;UBERON:0000200,3.87e-29,6;UBERON:0011216,1.20e-27,223;UBERON:0000025,1.56e-24,192;UBERON:0002298,4.04e-21,6;UBERON:0000369,2.63e-20,4;UBERON:0002435,2.63e-20,4;UBERON:0000204,2.63e-20,4;UBERON:0010082,2.63e-20,4;UBERON:0004111,3.25e-18,240;UBERON:0001872,7.20e-17,5;UBERON:0000988,2.97e-16,3;UBERON:0005383,9.95e-16,3;UBERON:0005382,9.95e-16,3;UBERON:0003076,1.58e-15,15;UBERON:0003057,1.58e-15,15;UBERON:0001870,7.48e-15,3;UBERON:0004733,1.18e-14,12;UBERON:0002028,1.18e-14,12;UBERON:0007277,1.18e-14,12;UBERON:0004732,1.76e-13,13;UBERON:0000483,9.67e-13,306;UBERON:0000119,1.51e-12,309;UBERON:0002148,1.81e-11,2;UBERON:0006331,1.81e-11,2;UBERON:0009662,1.81e-11,2;UBERON:0001871,2.56e-11,6;UBERON:0001873,3.02e-11,2;UBERON:0010122,3.02e-11,2;UBERON:0001897,9.55e-11,2;UBERON:0010225,9.55e-11,2;UBERON:0002771,1.49e-10,2;UBERON:0001875,1.49e-10,2;UBERON:0006514,1.49e-10,2;UBERON:0002702,1.90e-10,2;UBERON:0002021,5.59e-10,5;UBERON:0000349,2.44e-09,5;UBERON:0002680,2.82e-09,9;UBERON:0001895,2.82e-09,9;UBERON:0010092,2.82e-09,9;UBERON:0001896,1.54e-07,3;UBERON:0005290,1.54e-07,3;UBERON:0010096,1.54e-07,3;UBERON:0001894,5.37e-07,7;UBERON:0006222,5.37e-07,7;UBERON:0002581,9.91e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460511024178389,0.137836572484531,0,0,0.170453254832202,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,0,0,0.994147647766298,1.54736358051564,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,3.87733098438087,1.20598527610407,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,2.65722415744152,3.0149109656352,0,0.663475559587348,2.06883333267483,2.63262476584767,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,2.29163852134302,0,4.68528891450678,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0.207376382794494,0,0,0.313932918407225,0,0,0.416024019039416,0.520679215005393,0,0,0,0.171986032471617,0.0967563312890851,0,0.164230914106418,0,0,0.225980740780532,0,0,1.7727022867646,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0.313808538937,0.203996435272644,0,2.40168115483916,1.23214841002794,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,2.45166131000836,0,0,0,0,0,2.00473536971481,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,4.26633755993117,2.90911723833918,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.58634144372552,1.6274820991845,0.573409195690071,1.88579387612649,2.85643453530364,0.276697269872462,0,0,0.285465333544967,0,0.468334905806882,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,2.07387654227596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.431299245586727,0,0.218419276384028,0,0,0,0,0,0,0,0.352675943690684,0,2.376481328569,0,3.19267718114303,2.66651273512982,0,4.91016492495947,1.61475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,3.7821047386301,3.12431239445539,2.27355476151302,3.86836442182832,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,2.92269851800376,5.39336743215362,0,0,0,2.04250266890802,0,0,0,0,0.285906176706625,0.316027223465453,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0.701818390386317,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,1.96308467114945,0.891139200981258,0,0,0,0,0,0,0,0,0,0,1.43339583151451,0,3.60354898011848,0,1.0580536810308,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0.151557396436479,0,2.48750831837634,1.75836092965222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p3@HCN2 | |||
}} |
Latest revision as of 07:51, 20 September 2015
Short description: | p3@HCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HCN2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 1bp_to_ENST00000251287, NM_001194, uc002lpe.2_5end |
EntrezGene: | HCN2 |
HGNC: | 4846 |
UniProt: | Q9UL51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data