FFCP PHASE1:Hg19::chr17:41177220..41177282,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8153 | |EntrezGene=8153 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18315 | |HGNC=18315 | ||
|TSSclassifier=strong | |||
|UniProt=P52198,F5H2U5 | |UniProt=P52198,F5H2U5 | ||
|association_with_transcript=0bp_to_ENST00000225973,ENST00000544533,NM_005440,uc002icn.2_5end | |association_with_transcript=0bp_to_ENST00000225973,ENST00000544533,NM_005440,uc002icn.2_5end | ||
|cluster_id=chr17:41177220..41177282,+ | |||
|description=CAGE_peak_1_at_RND2_5end | |description=CAGE_peak_1_at_RND2_5end | ||
|id=chr17:41177220..41177282,+ | |id=chr17:41177220..41177282,+ | ||
|ontology_enrichment_celltype=CL:0000133!1.69e-09!59 | |ontology_enrichment_celltype=CL:0000133!1.69e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;6.10e-07;5!CL:0002319;9.34e-07;25 | |ontology_enrichment_celltype_v019=CL:0002322;6.10e-07;5!CL:0002319;9.34e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,5.76e-10,59;CL:0000047,7.31e-08,8;CL:0002322,6.25e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.80e-10;82 | |ontology_enrichment_development_v019=UBERON:0006601;7.80e-10;82 | ||
|ontology_enrichment_disease=DOID:3095!2.87e-08!22;DOID:2994!2.87e-08!22 | |ontology_enrichment_disease=DOID:3095!2.87e-08!22;DOID:2994!2.87e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.60e-10;22!DOID:2994;1.60e-10;22 | |ontology_enrichment_disease_v019=DOID:3095;1.60e-10;22!DOID:2994;1.60e-10;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.19e-10,22;DOID:2994,1.19e-10,22 | |||
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| ||
|short_description=p1@RND2 | |short_description=p1@RND2 | ||
}} | }} |
Latest revision as of 17:20, 24 September 2015
Short description: | p1@RND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RND2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000225973, ENST00000544533, NM_005440, uc002icn.2_5end |
EntrezGene: | RND2 |
HGNC: | 18315 |
UniProt: | P52198F5H2U5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 5.76e-10 | 59 |
neuronal stem cell | 7.31e-08 | 8 |
embryonic stem cell | 6.25e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.19e-10 | 22 |
germ cell cancer | 1.19e-10 | 22 |