FFCP PHASE1:Hg19::chr5:140501375..140501407,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:140501375..140501407,+
|short_description=p1@PCDHB4
|description=CAGE_peak_1_at_PCDHB4_5end
|association_with_transcript=-173bp_to_ENST00000194152,NM_01893...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56131 | |EntrezGene=56131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8689 | |HGNC=8689 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5E5 | |UniProt=Q9Y5E5 | ||
|association_with_transcript=-173bp_to_ENST00000194152,NM_018938,uc003lip.1_5end | |||
|cluster_id=chr5:140501375..140501407,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_PCDHB4_5end | |||
|id=chr5:140501375..140501407,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.45e-08;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.49e-18;82!UBERON:0002532;8.39e-08;206!UBERON:0010316;8.39e-08;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;7.64e-31;41!UBERON:0001890;7.64e-31;41!UBERON:0001893;5.96e-30;34!UBERON:0000073;6.38e-30;53!UBERON:0002616;6.38e-30;53!UBERON:0003528;1.15e-29;34!UBERON:0002020;1.15e-29;34!UBERON:0002791;4.74e-29;32!UBERON:0001869;6.50e-29;32!UBERON:0002619;8.55e-26;22!UBERON:0000956;1.11e-23;25!UBERON:0000203;1.11e-23;25!UBERON:0001950;2.55e-23;20!UBERON:0007023;3.93e-22;114!UBERON:0001017;3.01e-18;75!UBERON:0000955;1.11e-17;68!UBERON:0001016;7.29e-17;83!UBERON:0002420;2.81e-13;9!UBERON:0007245;2.81e-13;9!UBERON:0010009;2.81e-13;9!UBERON:0010011;2.81e-13;9!UBERON:0000454;2.81e-13;9!UBERON:0000125;4.16e-13;9!UBERON:0002308;4.16e-13;9!UBERON:0009663;1.21e-10;7!UBERON:0004732;7.64e-10;13!UBERON:0001894;1.41e-09;7!UBERON:0002298;2.72e-09;6!UBERON:0000200;4.72e-09;6!UBERON:0004733;7.44e-09;12!UBERON:0002028;7.44e-09;12!UBERON:0011216;2.81e-08;132!UBERON:0000349;5.98e-08;5!UBERON:0001871;2.22e-07;6!UBERON:0002021;3.29e-07;5!UBERON:0001872;4.05e-07;5!UBERON:0000369;8.27e-07;4!UBERON:0002435;8.27e-07;4!UBERON:0000204;8.27e-07;4 | |||
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| ||
|short_description=p1@PCDHB4 | |||
}} | }} |
Latest revision as of 03:21, 25 September 2015
Short description: | p1@PCDHB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDHB4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -173bp_to_ENST00000194152, NM_018938, uc003lip.1_5end |
EntrezGene: | PCDHB4 |
HGNC: | 8689 |
UniProt: | Q9Y5E5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data