FFCP PHASE1:Hg19::chr5:140501375..140501407,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8689 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5E5 | |||
|association_with_transcript=-173bp_to_ENST00000194152,NM_018938,uc003lip.1_5end | |||
|cluster_id=chr5:140501375..140501407,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_PCDHB4_5end | |||
|id=chr5:140501375..140501407,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.45e-08;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.49e-18;82!UBERON:0002532;8.39e-08;206!UBERON:0010316;8.39e-08;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.76e-60!115;UBERON:0001049!1.82e-38!57;UBERON:0005068!1.82e-38!57;UBERON:0006241!1.82e-38!57;UBERON:0007135!1.82e-38!57;UBERON:0001017!5.30e-34!82;UBERON:0002616!5.15e-33!59;UBERON:0005743!2.08e-32!86;UBERON:0000073!2.13e-32!94;UBERON:0001016!2.13e-32!94;UBERON:0003080!1.28e-30!42;UBERON:0002780!4.40e-30!41;UBERON:0001890!4.40e-30!41;UBERON:0006240!4.40e-30!41;UBERON:0003075!1.31e-29!86;UBERON:0007284!1.31e-29!86;UBERON:0000955!1.19e-28!69;UBERON:0006238!1.19e-28!69;UBERON:0002346!4.43e-28!90;UBERON:0001893!9.23e-25!34;UBERON:0002020!1.03e-24!34;UBERON:0003528!1.03e-24!34;UBERON:0002791!5.67e-24!33;UBERON:0001869!5.58e-23!32;UBERON:0004121!8.82e-23!169;UBERON:0000924!4.02e-22!173;UBERON:0006601!4.02e-22!173;UBERON:0000033!9.44e-21!123;UBERON:0000153!9.80e-21!129;UBERON:0007811!9.80e-21!129;UBERON:0003056!2.16e-20!61;UBERON:0000956!2.89e-17!25;UBERON:0000203!2.89e-17!25;UBERON:0002619!8.75e-17!22;UBERON:0001950!3.33e-15!20;UBERON:0000475!8.94e-13!365;UBERON:0000468!2.28e-11!659;UBERON:0004111!3.15e-11!241;UBERON:0000025!8.25e-11!194;UBERON:0000477!1.54e-09!286;UBERON:0000467!1.85e-09!625;UBERON:0000480!2.46e-09!626;UBERON:0002420!3.98e-09!9;UBERON:0007245!3.98e-09!9;UBERON:0010009!3.98e-09!9;UBERON:0010011!3.98e-09!9;UBERON:0000454!3.98e-09!9;UBERON:0002308!5.35e-09!9;UBERON:0000125!5.35e-09!9;UBERON:0003076!5.85e-09!15;UBERON:0003057!5.85e-09!15;UBERON:0000062!2.41e-08!511;UBERON:0000064!3.62e-08!219;UBERON:0002298!6.55e-08!8;UBERON:0000481!1.25e-07!347;UBERON:0009663!2.03e-07!7;UBERON:0004732!2.35e-07!13;UBERON:0002050!3.37e-07!605;UBERON:0005423!3.37e-07!605;UBERON:0000483!3.44e-07!309;UBERON:0000922!3.51e-07!612;UBERON:0000923!5.66e-07!604;UBERON:0005291!5.66e-07!604;UBERON:0006598!5.66e-07!604;UBERON:0002532!5.66e-07!604;UBERON:0000119!7.99e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.64e-31;41!UBERON:0001890;7.64e-31;41!UBERON:0001893;5.96e-30;34!UBERON:0000073;6.38e-30;53!UBERON:0002616;6.38e-30;53!UBERON:0003528;1.15e-29;34!UBERON:0002020;1.15e-29;34!UBERON:0002791;4.74e-29;32!UBERON:0001869;6.50e-29;32!UBERON:0002619;8.55e-26;22!UBERON:0000956;1.11e-23;25!UBERON:0000203;1.11e-23;25!UBERON:0001950;2.55e-23;20!UBERON:0007023;3.93e-22;114!UBERON:0001017;3.01e-18;75!UBERON:0000955;1.11e-17;68!UBERON:0001016;7.29e-17;83!UBERON:0002420;2.81e-13;9!UBERON:0007245;2.81e-13;9!UBERON:0010009;2.81e-13;9!UBERON:0010011;2.81e-13;9!UBERON:0000454;2.81e-13;9!UBERON:0000125;4.16e-13;9!UBERON:0002308;4.16e-13;9!UBERON:0009663;1.21e-10;7!UBERON:0004732;7.64e-10;13!UBERON:0001894;1.41e-09;7!UBERON:0002298;2.72e-09;6!UBERON:0000200;4.72e-09;6!UBERON:0004733;7.44e-09;12!UBERON:0002028;7.44e-09;12!UBERON:0011216;2.81e-08;132!UBERON:0000349;5.98e-08;5!UBERON:0001871;2.22e-07;6!UBERON:0002021;3.29e-07;5!UBERON:0001872;4.05e-07;5!UBERON:0000369;8.27e-07;4!UBERON:0002435;8.27e-07;4!UBERON:0000204;8.27e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.44e-88,114;UBERON:0001049,1.32e-54,56;UBERON:0005068,1.32e-54,56;UBERON:0006241,1.32e-54,56;UBERON:0007135,1.32e-54,56;UBERON:0000073,9.82e-51,53;UBERON:0002616,9.82e-51,53;UBERON:0001016,3.50e-47,89;UBERON:0001017,6.87e-47,81;UBERON:0002780,3.04e-43,41;UBERON:0001890,3.04e-43,41;UBERON:0003080,3.04e-43,41;UBERON:0006240,3.04e-43,41;UBERON:0003075,9.93e-41,82;UBERON:0007284,9.93e-41,82;UBERON:0002346,2.69e-39,86;UBERON:0000955,6.60e-39,68;UBERON:0006238,6.60e-39,68;UBERON:0001893,5.41e-35,34;UBERON:0003528,6.40e-35,34;UBERON:0002020,6.40e-35,34;UBERON:0002791,2.00e-32,32;UBERON:0001869,2.99e-32,32;UBERON:0010371,3.08e-30,104;UBERON:0003056,4.85e-29,61;UBERON:0010314,1.23e-28,132;UBERON:0004121,7.37e-27,171;UBERON:0000924,7.37e-27,171;UBERON:0006601,7.37e-27,171;UBERON:0011216,1.46e-26,223;UBERON:0002619,1.28e-25,22;UBERON:0000956,1.83e-23,25;UBERON:0000203,1.83e-23,25;UBERON:0001950,3.72e-23,20;UBERON:0000025,1.09e-14,192;UBERON:0004111,1.04e-13,240;UBERON:0002420,2.65e-13,9;UBERON:0007245,2.65e-13,9;UBERON:0010009,2.65e-13,9;UBERON:0010011,2.65e-13,9;UBERON:0000454,2.65e-13,9;UBERON:0000125,4.19e-13,9;UBERON:0002308,4.19e-13,9;UBERON:0003076,2.91e-12,15;UBERON:0003057,2.91e-12,15;UBERON:0009663,1.17e-10,7;UBERON:0004732,8.09e-10,13;UBERON:0001894,1.41e-09,7;UBERON:0006222,1.41e-09,7;UBERON:0002298,2.77e-09,6;UBERON:0000200,4.86e-09,6;UBERON:0004733,7.76e-09,12;UBERON:0002028,7.76e-09,12;UBERON:0007277,7.76e-09,12;UBERON:0000349,5.91e-08,5;UBERON:0000922,8.66e-08,592;UBERON:0005423,9.22e-08,581;UBERON:0002050,1.01e-07,564;UBERON:0001871,2.38e-07,6;UBERON:0000923,2.56e-07,560;UBERON:0010316,2.56e-07,560;UBERON:0005291,2.56e-07,560;UBERON:0006598,2.56e-07,560;UBERON:0010317,2.56e-07,560;UBERON:0002532,2.56e-07,560;UBERON:0000483,3.09e-07,306;UBERON:0002021,3.48e-07,5;UBERON:0001872,5.00e-07,5;UBERON:0000119,5.54e-07,309;UBERON:0000369,8.06e-07,4;UBERON:0002435,8.06e-07,4;UBERON:0000204,8.06e-07,4;UBERON:0010082,8.06e-07,4 | |||
|phase1_expression=3.45188920614058,2.14100523890983,2.53717927372748,0,2.23480547213644,1.74467704820074,5.06599756336621,0.631719873426831,1.04474251279935,0.245733936501509,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0.61560529038394,0,0,1.14494394852423,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.255725123687061,0.722878304769133,2.00535164254356,1.73815822752988,0.795285947051099,0.973269740605272,0,0,0,7.46580730336962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0.66944122552934,0.805658634218294,0,0.732186172644509,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0.560677600142307,1.06748995729705,0,0,0.134710672069688,0,0.605429710579726,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.505008341862199,0,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0,0.412210116953756,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0.144366447761074,0,0,0,0.858486162094873,0,0,0,0,1.34385702559088,0,0.358234090811393,0,0,0.985326475791887,0,0.621984346622316,0,0,0,0,1.17217447210047,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,1.690605505112,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.289562613335158,0.205476322550383,1.25342674267927,0,0,0,0,7.6228387266739,5.20559415430487,3.09315525111078,7.03568314404265,2.55175500661265,0,0,0,0.36807447515742,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.587403472388222,0,0,0,0,0,0,0.30239029332968,0.744323423456331,1.99500565274481,0.280660094433074,1.15325234330131,2.04682899626681,0.64341568457443,0,0,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,2.67906630284078,1.37354197227515,3.63041799650587,0,0,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0.322260734604821,0.145016693914229,0,1.24644849905432,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.987884678879706,0,0,0,0,0,3.48332062874083,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,6.73735898684351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.93699893558553,0,0,0,0.23874448473769,0,0.307160702099232,17.8946576597934,24.4764784554292,0,0,0,9.36465544780028,1.10513566212459,0,0.20453736500431,0,0,0,0,0,10.9494180256996,0,0,22.29465316019,18.5536196323703,0,0.260427761085233,2.18649999990489,2.89999830173917,0,0.762760950878299,1.18193840883968,0,0.583209226766509,0,22.143534645346,22.5515340229513,6.10326945268333,22.3370105061074,8.27533333069933,6.58156191461918,0.10893846351899,0.557694977114413,12.6198423946227,0.91153644677601,0,0,0,0.638002319463839,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,2.65372693510018,2.4441205797345,0,0,0,22.4445772825655,2.40773294189637,9.60484227473891,0,0,0,1.57833761139756,0,3.0607276163049,14.5960998941807,0,0,0,0,0,0,0,0.693373365065693,0,0,0,6.29016005671309,1.71986032471617,0,0,0,3.78257164304836,15.2683099176295,3.61569185248852,0.411125773940253,0,16.7773609283079,0,2.48492342779755,3.84215390530835,0,0.144090417154106,0,12.5264348439234,0,0,0,0,0,0.203996435272644,0,12.6088260629056,18.3453207715271,0,0,0,8.37847203816763,5.72901060029209,2.15361907373044,2.59582700648688,5.57993862577542,0.89268582976749,3.09043973438941,0,0,0.0787831823072236,0,0,0.492137407573744,0,9.54275627771164,23.5631892573026,0,0.137539436597234,0,0,0,14.6406431545839,0.335434687599266,4.1767024868575,4.45863999147484,0,0,0,2.1440859791201,5.29673576292345,0,0,0.864221491201268,0.326587360109409,1.19730191562487,0,0.681552087141687,0,0.58620893471233,0,13.0575785925166,18.2480990404912,0,0.704815022316672,5.12579580324934,4.24451623769098,1.24271716604159,0.992332043623902,0,0,0,3.80812462358632,1.0027595760908,2.14441903734423,5.57383472206668,0.157054096250234,12.4049545195378,13.9109941988238,20.1557398437465,14.9086390879419,23.6278879773495,24.2175971471395,0,0,0.151649117541648,0,0.235265819698172,0,0.28984205722165,0.149254802886874,0.233713309847224,0,0,0.50313580350515,0.889811221596536,0,0.151230923763239,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0.3980958886986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| |||
|short_description=p1@PCDHB4 | |||
}} |
Latest revision as of 03:21, 25 September 2015
Short description: | p1@PCDHB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDHB4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -173bp_to_ENST00000194152, NM_018938, uc003lip.1_5end |
EntrezGene: | PCDHB4 |
HGNC: | 8689 |
UniProt: | Q9Y5E5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data