FFCP PHASE1:Hg19::chr5:142065223..142065256,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:142065223..142065256,- to FFCP PHASE1:Hg19::chr5:142065223..142065256,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2246 | |EntrezGene=2246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3665 | |HGNC=3665 | ||
|TSSclassifier=strong | |||
|UniProt=P05230 | |UniProt=P05230 | ||
|association_with_transcript=0bp_to_ENST00000378046_5end | |||
|cluster_id=chr5:142065223..142065256,- | |||
|coexpression_cluster_id=C247 | |||
|description=CAGE_peak_6_at_FGF1_5end | |||
|id=chr5:142065223..142065256,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.09e-16;82!UBERON:0006241;4.83e-07;3!UBERON:0003057;4.83e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.05e-89!115;UBERON:0001049!9.22e-72!57;UBERON:0005068!9.22e-72!57;UBERON:0006241!9.22e-72!57;UBERON:0007135!9.22e-72!57;UBERON:0002616!4.33e-59!59;UBERON:0001017!6.74e-55!82;UBERON:0003080!7.36e-55!42;UBERON:0003075!1.79e-54!86;UBERON:0007284!1.79e-54!86;UBERON:0005743!5.07e-54!86;UBERON:0000955!2.14e-53!69;UBERON:0006238!2.14e-53!69;UBERON:0002780!5.49e-53!41;UBERON:0001890!5.49e-53!41;UBERON:0006240!5.49e-53!41;UBERON:0000073!3.99e-52!94;UBERON:0001016!3.99e-52!94;UBERON:0002346!2.01e-51!90;UBERON:0001893!1.46e-46!34;UBERON:0002020!1.78e-46!34;UBERON:0003528!1.78e-46!34;UBERON:0002791!2.01e-44!33;UBERON:0001869!2.10e-42!32;UBERON:0003056!5.77e-37!61;UBERON:0002619!9.03e-33!22;UBERON:0001950!1.55e-32!20;UBERON:0000153!2.12e-31!129;UBERON:0007811!2.12e-31!129;UBERON:0000033!1.78e-30!123;UBERON:0004121!6.60e-29!169;UBERON:0000956!2.55e-28!25;UBERON:0000203!2.55e-28!25;UBERON:0000924!6.88e-28!173;UBERON:0006601!6.88e-28!173;UBERON:0002308!1.21e-20!9;UBERON:0000125!1.21e-20!9;UBERON:0002420!3.28e-20!9;UBERON:0007245!3.28e-20!9;UBERON:0010009!3.28e-20!9;UBERON:0010011!3.28e-20!9;UBERON:0000454!3.28e-20!9;UBERON:0000025!3.13e-19!194;UBERON:0002298!1.31e-18!8;UBERON:0003076!3.10e-17!15;UBERON:0003057!3.10e-17!15;UBERON:0004111!1.16e-16!241;UBERON:0009663!2.04e-16!7;UBERON:0000200!3.03e-14!6;UBERON:0004732!9.00e-14!13;UBERON:0000477!3.97e-13!286;UBERON:0004733!8.84e-12!12;UBERON:0002028!8.84e-12!12;UBERON:0007277!8.84e-12!12;UBERON:0002021!9.94e-12!5;UBERON:0000483!1.46e-11!309;UBERON:0000119!2.62e-11!312;UBERON:0001871!3.38e-10!7;UBERON:0000369!4.00e-10!4;UBERON:0002435!4.00e-10!4;UBERON:0000204!4.00e-10!4;UBERON:0010082!4.00e-10!4;UBERON:0000475!3.62e-09!365;UBERON:0000064!3.71e-09!219;UBERON:0000062!2.29e-08!511;UBERON:0000988!2.90e-08!3;UBERON:0001896!4.32e-08!3;UBERON:0005290!4.32e-08!3;UBERON:0010096!4.32e-08!3;UBERON:0001872!4.76e-08!5;UBERON:0006331!5.09e-08!3;UBERON:0002771!6.56e-08!3;UBERON:0005383!7.53e-08!3;UBERON:0005382!7.53e-08!3;UBERON:0001894!7.67e-08!7;UBERON:0006222!7.67e-08!7;UBERON:0000349!8.89e-08!5;UBERON:0002240!1.06e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.20e-51;34!UBERON:0003528;8.49e-48;34!UBERON:0002020;8.49e-48;34!UBERON:0002791;7.58e-47;32!UBERON:0001869;1.04e-45;32!UBERON:0000073;5.20e-44;53!UBERON:0002616;5.20e-44;53!UBERON:0002780;3.67e-43;41!UBERON:0001890;3.67e-43;41!UBERON:0002619;7.61e-38;22!UBERON:0001950;5.11e-36;20!UBERON:0000956;4.01e-33;25!UBERON:0000203;4.01e-33;25!UBERON:0000125;4.43e-33;9!UBERON:0002308;4.43e-33;9!UBERON:0002298;8.30e-29;6!UBERON:0001017;4.05e-26;75!UBERON:0000955;3.30e-25;68!UBERON:0009663;1.75e-24;7!UBERON:0004732;7.95e-23;13!UBERON:0001016;5.95e-20;83!UBERON:0000200;6.70e-20;6!UBERON:0002420;6.38e-19;9!UBERON:0007245;6.38e-19;9!UBERON:0010009;6.38e-19;9!UBERON:0010011;6.38e-19;9!UBERON:0000454;6.38e-19;9!UBERON:0004733;6.93e-19;12!UBERON:0002028;6.93e-19;12!UBERON:0007023;2.71e-16;114!UBERON:0002021;2.22e-15;5!UBERON:0000988;2.26e-15;3!UBERON:0001896;3.26e-15;3!UBERON:0005290;3.26e-15;3!UBERON:0000369;1.04e-11;4!UBERON:0002435;1.04e-11;4!UBERON:0000204;1.04e-11;4!UBERON:0005162;4.06e-11;2!UBERON:0000122;4.06e-11;2!UBERON:0002148;1.85e-10;2!UBERON:0001875;1.85e-10;2!UBERON:0006331;1.85e-10;2!UBERON:0009662;1.85e-10;2!UBERON:0006514;1.85e-10;2!UBERON:0002771;3.79e-10;2!UBERON:0001872;1.86e-09;5!UBERON:0011216;2.78e-09;132!UBERON:0002680;9.23e-09;9!UBERON:0001895;9.23e-09;9!UBERON:0001870;1.30e-07;3!UBERON:0005383;2.12e-07;3!UBERON:0005382;2.12e-07;3!UBERON:0002240;4.83e-07;3!UBERON:0005174;4.83e-07;3!UBERON:0001137;4.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.82e-85,56;UBERON:0005068,6.82e-85,56;UBERON:0006241,6.82e-85,56;UBERON:0007135,6.82e-85,56;UBERON:0000073,5.60e-79,53;UBERON:0002616,5.60e-79,53;UBERON:0000955,9.04e-64,68;UBERON:0006238,9.04e-64,68;UBERON:0001893,1.99e-61,34;UBERON:0003528,2.78e-61,34;UBERON:0002020,2.78e-61,34;UBERON:0002780,1.77e-60,41;UBERON:0001890,1.77e-60,41;UBERON:0003080,1.77e-60,41;UBERON:0006240,1.77e-60,41;UBERON:0003075,4.45e-60,82;UBERON:0007284,4.45e-60,82;UBERON:0001017,4.63e-60,81;UBERON:0001016,3.63e-57,89;UBERON:0002346,5.42e-57,86;UBERON:0007023,1.00e-53,114;UBERON:0001869,1.09e-53,32;UBERON:0002791,1.41e-53,32;UBERON:0010371,5.20e-46,104;UBERON:0003056,6.01e-43,61;UBERON:0002619,8.35e-38,22;UBERON:0010314,2.74e-37,132;UBERON:0001950,5.38e-36,20;UBERON:0000125,4.09e-33,9;UBERON:0002308,4.09e-33,9;UBERON:0000956,4.35e-33,25;UBERON:0000203,4.35e-33,25;UBERON:0002298,7.39e-29,6;UBERON:0004121,8.00e-27,171;UBERON:0000924,8.00e-27,171;UBERON:0006601,8.00e-27,171;UBERON:0009663,2.07e-24,7;UBERON:0003076,2.45e-24,15;UBERON:0003057,2.45e-24,15;UBERON:0004732,9.10e-23,13;UBERON:0000025,1.01e-21,192;UBERON:0011216,2.60e-20,223;UBERON:0000200,5.62e-20,6;UBERON:0002420,7.26e-19,9;UBERON:0007245,7.26e-19,9;UBERON:0010009,7.26e-19,9;UBERON:0010011,7.26e-19,9;UBERON:0000454,7.26e-19,9;UBERON:0004733,7.75e-19,12;UBERON:0002028,7.75e-19,12;UBERON:0007277,7.75e-19,12;UBERON:0004111,5.81e-16,240;UBERON:0000988,1.69e-15,3;UBERON:0002021,3.01e-15,5;UBERON:0001896,3.87e-15,3;UBERON:0005290,3.87e-15,3;UBERON:0010096,3.87e-15,3;UBERON:0000483,5.35e-12,306;UBERON:0000119,8.24e-12,309;UBERON:0000369,1.06e-11,4;UBERON:0002435,1.06e-11,4;UBERON:0000204,1.06e-11,4;UBERON:0010082,1.06e-11,4;UBERON:0005162,4.49e-11,2;UBERON:0000122,4.49e-11,2;UBERON:0002148,1.39e-10,2;UBERON:0006331,1.39e-10,2;UBERON:0009662,1.39e-10,2;UBERON:0001875,1.69e-10,2;UBERON:0006514,1.69e-10,2;UBERON:0002771,2.72e-10,2;UBERON:0001872,1.83e-09,5;UBERON:0002680,9.34e-09,9;UBERON:0001895,9.34e-09,9;UBERON:0010092,9.34e-09,9;UBERON:0001870,1.49e-07,3;UBERON:0005383,2.12e-07,3;UBERON:0005382,2.12e-07,3;UBERON:0002240,3.32e-07,3;UBERON:0005174,3.32e-07,3;UBERON:0001137,3.32e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36228757640879,4.86634870302636,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,2.59022384726391,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,3.71072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,1.5677537021303,0,1.10579259931225,0.886642856860642,0.658156191461918,0,0,0.307801034015188,0,0,0.448788222048861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,2.42644078730437,0,2.34264445725339,0,0.19566461893209,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,3.16553979779394,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,2.87501295673185,0,0,0,0.558564802544508,0.687481272035051,0,0.199679000498991,1.71690419254628,1.11585728720936,0.470284307407084,0,0,0,0,0,0,0,0,1.36203406111576,0,0,0,0,0,3.7057229561395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71494208359256,1.45455861916959,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0,0,0,0.886068179966986,1.95242023843141,2.3786276834235,2.29363678276028,1.33114861844223,3.78788057942439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40414893011235,1.41696576325585,1.11743701340006,2.66651273512982,0.504143392443436,2.00556032146232,2.90656162137332,4.28308260777463,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,2.70150338473579,0.781078098613847,1.65349437200947,3.6781169912466,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,9.78764154866377,3.02554758389106,0,0,0.313972371402056,3.14231179832004,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,1.76677620403451,1.78227840196252,0.8453114551668,0,0,0,0,0,0,0,0,0,2.15009374727177,0,2.65166811744567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,2.48239190068549,0.639701945702943,0.476128862927481,0,0,0,0.0636471582781649,0,0.653150243690884,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36228757640879,4.86634870302636,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,2.59022384726391,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,3.71072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,1.5677537021303,0,1.10579259931225,0.886642856860642,0.658156191461918,0,0,0.307801034015188,0,0,0.448788222048861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,2.42644078730437,0,2.34264445725339,0,0.19566461893209,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,3.16553979779394,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,2.87501295673185,0,0,0,0.558564802544508,0.687481272035051,0,0.199679000498991,1.71690419254628,1.11585728720936,0.470284307407084,0,0,0,0,0,0,0,0,1.36203406111576,0,0,0,0,0,3.7057229561395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71494208359256,1.45455861916959,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0,0,0,0.886068179966986,1.95242023843141,2.3786276834235,2.29363678276028,1.33114861844223,3.78788057942439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40414893011235,1.41696576325585,1.11743701340006,2.66651273512982,0.504143392443436,2.00556032146232,2.90656162137332,4.28308260777463,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,2.70150338473579,0.781078098613847,1.65349437200947,3.6781169912466,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,9.78764154866377,3.02554758389106,0,0,0.313972371402056,3.14231179832004,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,1.76677620403451,1.78227840196252,0.8453114551668,0,0,0,0,0,0,0,0,0,2.15009374727177,0,2.65166811744567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,2.48239190068549,0.639701945702943,0.476128862927481,0,0,0,0.0636471582781649,0,0.653150243690884,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p6@FGF1 | |||
}} | }} |
Latest revision as of 06:54, 25 September 2015
Short description: | p6@FGF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FGF1_5end |
Coexpression cluster: | C247_pons_locus_medulla_spinal_paracentral_medial_occipital |
Association with transcript: | 0bp_to_ENST00000378046_5end |
EntrezGene: | FGF1 |
HGNC: | 3665 |
UniProt: | P05230 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data