FFCP PHASE1:Hg19::chr16:1031762..1031781,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30812 | |EntrezGene=30812 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11203 | |HGNC=11203 | ||
|TSSclassifier=strong | |||
|UniProt=P57073 | |UniProt=P57073 | ||
|association_with_transcript=-26bp_to_ENST00000293894,NM_014587,uc002ckn.2_5end | |association_with_transcript=-26bp_to_ENST00000293894,NM_014587,uc002ckn.2_5end | ||
|cluster_id=chr16:1031762..1031781,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SOX8_5end | |description=CAGE_peak_1_at_SOX8_5end | ||
|id=chr16:1031762..1031781,+ | |id=chr16:1031762..1031781,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.08e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.64e-19;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-41!115;UBERON:0005743!2.57e-41!86;UBERON:0000073!1.08e-40!94;UBERON:0001016!1.08e-40!94;UBERON:0001049!4.30e-39!57;UBERON:0005068!4.30e-39!57;UBERON:0006241!4.30e-39!57;UBERON:0007135!4.30e-39!57;UBERON:0001017!2.45e-38!82;UBERON:0002346!1.18e-33!90;UBERON:0003075!6.54e-33!86;UBERON:0007284!6.54e-33!86;UBERON:0002616!3.02e-31!59;UBERON:0002780!5.10e-31!41;UBERON:0001890!5.10e-31!41;UBERON:0006240!5.10e-31!41;UBERON:0003080!8.27e-30!42;UBERON:0000955!1.27e-29!69;UBERON:0006238!1.27e-29!69;UBERON:0002020!8.18e-27!34;UBERON:0003528!8.18e-27!34;UBERON:0001893!8.82e-27!34;UBERON:0002791!5.72e-26!33;UBERON:0001869!6.29e-25!32;UBERON:0003056!7.05e-24!61;UBERON:0000924!2.21e-23!173;UBERON:0006601!2.21e-23!173;UBERON:0004121!1.65e-22!169;UBERON:0000153!1.14e-20!129;UBERON:0007811!1.14e-20!129;UBERON:0000033!7.52e-20!123;UBERON:0000956!4.95e-19!25;UBERON:0000203!4.95e-19!25;UBERON:0002619!2.79e-17!22;UBERON:0001950!9.62e-16!20;UBERON:0003076!3.05e-10!15;UBERON:0003057!3.05e-10!15;UBERON:0002308!2.82e-09!9;UBERON:0000125!2.82e-09!9;UBERON:0002420!3.90e-09!9;UBERON:0007245!3.90e-09!9;UBERON:0010009!3.90e-09!9;UBERON:0010011!3.90e-09!9;UBERON:0000454!3.90e-09!9;UBERON:0004732!1.12e-08!13;UBERON:0004733!8.07e-08!12;UBERON:0002028!8.07e-08!12;UBERON:0007277!8.07e-08!12;UBERON:0009663!1.53e-07!7;UBERON:0000922!1.70e-07!612;UBERON:0000481!5.46e-07!347 | |ontology_enrichment_uberon=UBERON:0007023!1.02e-41!115;UBERON:0005743!2.57e-41!86;UBERON:0000073!1.08e-40!94;UBERON:0001016!1.08e-40!94;UBERON:0001049!4.30e-39!57;UBERON:0005068!4.30e-39!57;UBERON:0006241!4.30e-39!57;UBERON:0007135!4.30e-39!57;UBERON:0001017!2.45e-38!82;UBERON:0002346!1.18e-33!90;UBERON:0003075!6.54e-33!86;UBERON:0007284!6.54e-33!86;UBERON:0002616!3.02e-31!59;UBERON:0002780!5.10e-31!41;UBERON:0001890!5.10e-31!41;UBERON:0006240!5.10e-31!41;UBERON:0003080!8.27e-30!42;UBERON:0000955!1.27e-29!69;UBERON:0006238!1.27e-29!69;UBERON:0002020!8.18e-27!34;UBERON:0003528!8.18e-27!34;UBERON:0001893!8.82e-27!34;UBERON:0002791!5.72e-26!33;UBERON:0001869!6.29e-25!32;UBERON:0003056!7.05e-24!61;UBERON:0000924!2.21e-23!173;UBERON:0006601!2.21e-23!173;UBERON:0004121!1.65e-22!169;UBERON:0000153!1.14e-20!129;UBERON:0007811!1.14e-20!129;UBERON:0000033!7.52e-20!123;UBERON:0000956!4.95e-19!25;UBERON:0000203!4.95e-19!25;UBERON:0002619!2.79e-17!22;UBERON:0001950!9.62e-16!20;UBERON:0003076!3.05e-10!15;UBERON:0003057!3.05e-10!15;UBERON:0002308!2.82e-09!9;UBERON:0000125!2.82e-09!9;UBERON:0002420!3.90e-09!9;UBERON:0007245!3.90e-09!9;UBERON:0010009!3.90e-09!9;UBERON:0010011!3.90e-09!9;UBERON:0000454!3.90e-09!9;UBERON:0004732!1.12e-08!13;UBERON:0004733!8.07e-08!12;UBERON:0002028!8.07e-08!12;UBERON:0007277!8.07e-08!12;UBERON:0009663!1.53e-07!7;UBERON:0000922!1.70e-07!612;UBERON:0000481!5.46e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.55e-39;34!UBERON:0003528;7.35e-39;34!UBERON:0002020;7.35e-39;34!UBERON:0002791;2.48e-38;32!UBERON:0001869;3.59e-38;32!UBERON:0002780;1.83e-36;41!UBERON:0001890;1.83e-36;41!UBERON:0000073;1.32e-34;53!UBERON:0002616;1.32e-34;53!UBERON:0000956;3.84e-32;25!UBERON:0000203;3.84e-32;25!UBERON:0002619;4.08e-29;22!UBERON:0001950;1.91e-26;20!UBERON:0000955;6.90e-23;68!UBERON:0001017;2.15e-22;75!UBERON:0001016;3.52e-21;83!UBERON:0000125;7.72e-15;9!UBERON:0002308;7.72e-15;9!UBERON:0002420;1.38e-14;9!UBERON:0007245;1.38e-14;9!UBERON:0010009;1.38e-14;9!UBERON:0010011;1.38e-14;9!UBERON:0000454;1.38e-14;9!UBERON:0007023;2.91e-12;114!UBERON:0009663;7.35e-12;7!UBERON:0004732;3.26e-11;13!UBERON:0002298;2.56e-10;6!UBERON:0011216;6.27e-10;132!UBERON:0004733;8.07e-10;12!UBERON:0002028;8.07e-10;12!UBERON:0000200;1.07e-09;6!UBERON:0000349;2.06e-08;5!UBERON:0001872;2.86e-08;5!UBERON:0002021;2.97e-08;5!UBERON:0001871;4.71e-08;6!UBERON:0001894;2.87e-07;7!UBERON:0000369;3.28e-07;4!UBERON:0002435;3.28e-07;4!UBERON:0000204;3.28e-07;4!UBERON:0000922;9.04e-07;49 | |||
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| ||
|short_description=p1@SOX8 | |short_description=p1@SOX8 | ||
}} | }} |
Latest revision as of 04:17, 20 September 2015
Short description: | p1@SOX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX8_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -26bp_to_ENST00000293894, NM_014587, uc002ckn.2_5end |
EntrezGene: | SOX8 |
HGNC: | 11203 |
UniProt: | P57073 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.08e-07 | 8 |