FFCP PHASE1:Hg19::chr22:30792980..30793047,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23541 | |EntrezGene=23541 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10699 | |HGNC=10699 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3U4,B3KRD8,C9IYR5,F8WEE7,F8WED8 | |UniProt=F5H3U4,B3KRD8,C9IYR5,F8WEE7,F8WED8 | ||
|association_with_transcript=0bp_to_ENST00000402592,ENST00000403484,ENST00000405717,ENST00000416523,ENST00000437022,ENST00000452649,ENST00000459728,ENST00000467218_5end | |association_with_transcript=0bp_to_ENST00000402592,ENST00000403484,ENST00000405717,ENST00000416523,ENST00000437022,ENST00000452649,ENST00000459728,ENST00000467218_5end | ||
|cluster_id=chr22:30792980..30793047,+ | |||
|description=CAGE_peak_1_at_SEC14L2_5end | |description=CAGE_peak_1_at_SEC14L2_5end | ||
|id=chr22:30792980..30793047,+ | |id=chr22:30792980..30793047,+ | ||
|ontology_enrichment_celltype=CL:0000220!9.68e-19!246;CL:0002321!4.99e-18!248;CL:0000359!6.67e-13!32;CL:0000680!2.60e-12!57;CL:0000056!2.60e-12!57;CL:0000355!2.60e-12!57;CL:0000183!4.71e-12!59;CL:0000187!1.98e-11!54;CL:0000222!6.53e-11!119;CL:0000055!1.51e-10!180;CL:0000393!2.14e-10!60;CL:0000211!2.14e-10!60;CL:0000192!3.67e-10!42;CL:0000514!3.67e-10!42;CL:0000066!1.48e-07!254 | |ontology_enrichment_celltype=CL:0000220!9.68e-19!246;CL:0002321!4.99e-18!248;CL:0000359!6.67e-13!32;CL:0000680!2.60e-12!57;CL:0000056!2.60e-12!57;CL:0000355!2.60e-12!57;CL:0000183!4.71e-12!59;CL:0000187!1.98e-11!54;CL:0000222!6.53e-11!119;CL:0000055!1.51e-10!180;CL:0000393!2.14e-10!60;CL:0000211!2.14e-10!60;CL:0000192!3.67e-10!42;CL:0000514!3.67e-10!42;CL:0000066!1.48e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.71e-12;32!CL:0000192;6.32e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.72e-18,250;CL:0000359,5.78e-13,32;CL:0000680,2.61e-12,58;CL:0000056,2.61e-12,58;CL:0000355,2.61e-12,58;CL:0000187,2.00e-11,55;CL:0000222,4.61e-11,121;CL:0000393,2.88e-10,61;CL:0000211,2.88e-10,61;CL:0000192,3.91e-10,43;CL:0000514,3.91e-10,43;CL:0000066,2.38e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000514;6.32e-08;43!CL:0000355;6.67e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;2.88e-12;42!UBERON:0003509;2.88e-12;42!UBERON:0004572;2.88e-12;42!UBERON:0004573;4.89e-12;33!UBERON:0004571;4.89e-12;33!UBERON:0000073;1.40e-09;53!UBERON:0002616;1.40e-09;53!UBERON:0007500;2.43e-09;56!UBERON:0001981;2.43e-09;56!UBERON:0004537;2.43e-09;56!UBERON:0001893;2.60e-09;34!UBERON:0003914;4.10e-09;74!UBERON:0003528;4.49e-09;34!UBERON:0002020;4.49e-09;34!UBERON:0002780;5.24e-09;41!UBERON:0001890;5.24e-09;41!UBERON:0002791;8.50e-09;32!UBERON:0001869;8.50e-09;32!UBERON:0002104;5.28e-08;21!UBERON:0000970;5.78e-08;20!UBERON:0000019;1.62e-07;19!UBERON:0000047;1.62e-07;19!UBERON:0004088;1.62e-07;19!UBERON:0010230;1.62e-07;19!UBERON:0002049;1.91e-07;75!UBERON:0007798;1.91e-07;75!UBERON:0000956;2.26e-07;25!UBERON:0000203;2.26e-07;25!UBERON:0000055;4.20e-07;65!UBERON:0001456;4.82e-07;21!UBERON:0001032;5.11e-07;24!UBERON:0004456;5.11e-07;24!UBERON:0010371;5.63e-07;31!UBERON:0000020;6.04e-07;23 | |||
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| ||
|short_description=p1@SEC14L2 | |short_description=p1@SEC14L2 | ||
}} | }} |
Latest revision as of 17:58, 19 September 2015
Short description: | p1@SEC14L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEC14L2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000402592, ENST00000403484, ENST00000405717, ENST00000416523, ENST00000437022, ENST00000452649, ENST00000459728, ENST00000467218_5end |
EntrezGene: | SEC14L2 |
HGNC: | 10699 |
UniProt: | F5H3U4B3KRD8C9IYR5F8WEE7F8WED8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.72e-18 | 250 |
vascular associated smooth muscle cell | 5.78e-13 | 32 |
muscle precursor cell | 2.61e-12 | 58 |
myoblast | 2.61e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.61e-12 | 58 |
muscle cell | 2.00e-11 | 55 |
mesodermal cell | 4.61e-11 | 121 |
electrically responsive cell | 2.88e-10 | 61 |
electrically active cell | 2.88e-10 | 61 |
smooth muscle cell | 3.91e-10 | 43 |
smooth muscle myoblast | 3.91e-10 | 43 |
epithelial cell | 2.38e-07 | 253 |