FFCP PHASE1:Hg19::chr20:9495194..9495205,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=24141 | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |HGNC=16097 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |UniProt=Q9UJQ1 | ||
|association_with_transcript=-65bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | |association_with_transcript=-65bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | ||
|cluster_id=chr20:9495194..9495205,+ | |||
|coexpression_cluster_id=C2627 | |||
|description=CAGE_peak_7_at_LAMP5_5end | |description=CAGE_peak_7_at_LAMP5_5end | ||
|id=chr20:9495194..9495205,+ | |id=chr20:9495194..9495205,+ | ||
|ontology_enrichment_celltype=CL:0000784!7.20e-08!3 | |ontology_enrichment_celltype=CL:0000784!7.20e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.90e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.02e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.57e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;5.14e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.90e-09,31;DOID:2531,8.96e-08,51;DOID:0060083,8.96e-08,51;DOID:1240,3.55e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.97e-58!57;UBERON:0005068!2.97e-58!57;UBERON:0006241!2.97e-58!57;UBERON:0007135!2.97e-58!57;UBERON:0002020!5.04e-48!34;UBERON:0003528!5.04e-48!34;UBERON:0001869!1.09e-47!32;UBERON:0001893!1.38e-47!34;UBERON:0002616!3.24e-47!59;UBERON:0002791!9.09e-46!33;UBERON:0002780!4.57e-44!41;UBERON:0001890!4.57e-44!41;UBERON:0006240!4.57e-44!41;UBERON:0003080!8.10e-43!42;UBERON:0001017!1.34e-40!82;UBERON:0000955!2.04e-40!69;UBERON:0006238!2.04e-40!69;UBERON:0005743!4.61e-40!86;UBERON:0000073!4.60e-39!94;UBERON:0001016!4.60e-39!94;UBERON:0003075!1.61e-38!86;UBERON:0007284!1.61e-38!86;UBERON:0002346!2.96e-36!90;UBERON:0007023!4.68e-35!115;UBERON:0000956!1.08e-33!25;UBERON:0000203!1.08e-33!25;UBERON:0002619!4.61e-32!22;UBERON:0003056!1.16e-28!61;UBERON:0001950!4.63e-28!20;UBERON:0000033!3.04e-25!123;UBERON:0000153!9.24e-25!129;UBERON:0007811!9.24e-25!129;UBERON:0004121!3.92e-20!169;UBERON:0000924!2.31e-19!173;UBERON:0006601!2.31e-19!173;UBERON:0002420!3.15e-16!9;UBERON:0007245!3.15e-16!9;UBERON:0010009!3.15e-16!9;UBERON:0010011!3.15e-16!9;UBERON:0000454!3.15e-16!9;UBERON:0003076!6.01e-16!15;UBERON:0003057!6.01e-16!15;UBERON:0002308!1.15e-15!9;UBERON:0000125!1.15e-15!9;UBERON:0000200!1.34e-13!6;UBERON:0000349!2.16e-12!5;UBERON:0009663!6.38e-12!7;UBERON:0004733!1.00e-10!12;UBERON:0002028!1.00e-10!12;UBERON:0007277!1.00e-10!12;UBERON:0001871!2.47e-10!7;UBERON:0000369!2.76e-10!4;UBERON:0002435!2.76e-10!4;UBERON:0000204!2.76e-10!4;UBERON:0010082!2.76e-10!4;UBERON:0002298!4.84e-10!8;UBERON:0004732!8.75e-10!13;UBERON:0000025!9.06e-10!194;UBERON:0004111!3.02e-09!241;UBERON:0000477!4.90e-09!286;UBERON:0005383!4.03e-08!3;UBERON:0005382!4.03e-08!3;UBERON:0002771!9.91e-08!3;UBERON:0000988!1.06e-07!3;UBERON:0001896!1.21e-07!3;UBERON:0005290!1.21e-07!3;UBERON:0010096!1.21e-07!3;UBERON:0002021!1.33e-07!5;UBERON:0001872!1.43e-07!5;UBERON:0002240!1.55e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.01e-36;32!UBERON:0001869;2.04e-36;32!UBERON:0002619;3.25e-36;22!UBERON:0003528;1.13e-35;34!UBERON:0002020;1.13e-35;34!UBERON:0001893;1.80e-32;34!UBERON:0000956;1.26e-31;25!UBERON:0000203;1.26e-31;25!UBERON:0001950;8.83e-30;20!UBERON:0002780;4.96e-25;41!UBERON:0001890;4.96e-25;41!UBERON:0000073;2.86e-24;53!UBERON:0002616;2.86e-24;53!UBERON:0000349;1.10e-20;5!UBERON:0000955;4.88e-18;68!UBERON:0002298;5.42e-17;6!UBERON:0001017;5.82e-17;75!UBERON:0002420;2.13e-16;9!UBERON:0007245;2.13e-16;9!UBERON:0010009;2.13e-16;9!UBERON:0010011;2.13e-16;9!UBERON:0000454;2.13e-16;9!UBERON:0001871;1.77e-14;6!UBERON:0001896;1.90e-12;3!UBERON:0005290;1.90e-12;3!UBERON:0001016;3.67e-12;83!UBERON:0000125;1.18e-11;9!UBERON:0002308;1.18e-11;9!UBERON:0000200;4.26e-11;6!UBERON:0000369;2.09e-10;4!UBERON:0002435;2.09e-10;4!UBERON:0000204;2.09e-10;4!UBERON:0009663;7.58e-10;7!UBERON:0001876;1.77e-09;2!UBERON:0002771;3.74e-09;2!UBERON:0001954;3.74e-09;2!UBERON:0002702;3.74e-09;2!UBERON:0003022;3.74e-09;2!UBERON:0002421;3.74e-09;2!UBERON:0002600;3.74e-09;2!UBERON:0004733;2.38e-08;12!UBERON:0002028;2.38e-08;12!UBERON:0002021;7.81e-08;5!UBERON:0004732;1.10e-07;13!UBERON:0005383;6.96e-07;3!UBERON:0005382;6.96e-07;3!UBERON:0000988;9.49e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.89e-45,56;UBERON:0005068,1.89e-45,56;UBERON:0006241,1.89e-45,56;UBERON:0007135,1.89e-45,56;UBERON:0003528,5.29e-42,34;UBERON:0002020,5.29e-42,34;UBERON:0000073,6.14e-41,53;UBERON:0002616,6.14e-41,53;UBERON:0002791,4.19e-40,32;UBERON:0001869,4.19e-40,32;UBERON:0001893,1.53e-37,34;UBERON:0002619,3.99e-36,22;UBERON:0001016,7.30e-35,89;UBERON:0001017,4.29e-34,81;UBERON:0002780,7.96e-34,41;UBERON:0001890,7.96e-34,41;UBERON:0003080,7.96e-34,41;UBERON:0006240,7.96e-34,41;UBERON:0000955,7.56e-33,68;UBERON:0006238,7.56e-33,68;UBERON:0000956,1.51e-31,25;UBERON:0000203,1.51e-31,25;UBERON:0001950,9.11e-30,20;UBERON:0003075,3.96e-29,82;UBERON:0007284,3.96e-29,82;UBERON:0002346,1.74e-27,86;UBERON:0010371,1.20e-21,104;UBERON:0003056,2.52e-21,61;UBERON:0007023,4.14e-21,114;UBERON:0000349,1.04e-20,5;UBERON:0010314,4.04e-17,132;UBERON:0002298,6.77e-17,6;UBERON:0002420,1.44e-16,9;UBERON:0007245,1.44e-16,9;UBERON:0010009,1.44e-16,9;UBERON:0010011,1.44e-16,9;UBERON:0000454,1.44e-16,9;UBERON:0004121,5.69e-15,171;UBERON:0000924,5.69e-15,171;UBERON:0006601,5.69e-15,171;UBERON:0001871,1.75e-14,6;UBERON:0003076,1.95e-12,15;UBERON:0003057,1.95e-12,15;UBERON:0001896,2.57e-12,3;UBERON:0005290,2.57e-12,3;UBERON:0010096,2.57e-12,3;UBERON:0000125,9.69e-12,9;UBERON:0002308,9.69e-12,9;UBERON:0000200,5.42e-11,6;UBERON:0011216,1.07e-10,223;UBERON:0000369,1.94e-10,4;UBERON:0002435,1.94e-10,4;UBERON:0000204,1.94e-10,4;UBERON:0010082,1.94e-10,4;UBERON:0009663,6.18e-10,7;UBERON:0001876,1.41e-09,2;UBERON:0002771,3.99e-09,2;UBERON:0001954,4.89e-09,2;UBERON:0003022,4.89e-09,2;UBERON:0002421,4.89e-09,2;UBERON:0002600,4.89e-09,2;UBERON:0002702,5.10e-09,2;UBERON:0000025,6.73e-09,192;UBERON:0004733,2.64e-08,12;UBERON:0002028,2.64e-08,12;UBERON:0007277,2.64e-08,12;UBERON:0002021,6.70e-08,5;UBERON:0004732,1.22e-07,13;UBERON:0004111,2.24e-07,240;UBERON:0005383,6.97e-07,3;UBERON:0005382,6.97e-07,3;UBERON:0000988,9.24e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66943437013739,2.85997455390064,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,2.77791307545966,2.47330397904978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3246726677924,0,0,0,7.54763952987388,14.7313786249465,1.27753871307098,0,1.84344458585075,2.46043718681657,2.16903884225481,4.29853809884489,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,3.23539657744179,0,0,1.68900326502395,0,0,0,0,0,0,0,0,27.1133356220242,0,0,0,0,1.76259386507517,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,8.20055782652774,0,0.110579259931225,0,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.1713222286267,0,0,0,0.394584402849391,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.886351143382302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82637992774971,3.97614844904652,1.22583065500418,0,0,0,0,0,1.76173714308272,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65418642901582,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,3.53876168215693,1.251909307065,1.72022758707021,1.55300672151593,2.11127770000704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,2.2387947355906,0,0.368211900503681,0,0,0,1.83302179374359,0,1.63814457288021,0,0,0,0,0,0,0,0,0,2.76185667914776,2.8339315265117,0.159633859057151,2.87162909937057,0,1.45230230174858,1.29180516505481,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.607838261565552,2.34323429584154,2.27355476151302,0.507326481551255,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,3.73833531372574,0.920818829879887,0,0,0,10.5267445243721,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35570160537934,0.297046400327086,2.113278637917,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,1.49581278420012,0,0,0,0,0,0.252332849670158,0,0,0.101988829741982,0,0,0,0,0,0,0.827463966895162,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66943437013739,2.85997455390064,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,2.77791307545966,2.47330397904978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3246726677924,0,0,0,7.54763952987388,14.7313786249465,1.27753871307098,0,1.84344458585075,2.46043718681657,2.16903884225481,4.29853809884489,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,3.23539657744179,0,0,1.68900326502395,0,0,0,0,0,0,0,0,27.1133356220242,0,0,0,0,1.76259386507517,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,8.20055782652774,0,0.110579259931225,0,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.1713222286267,0,0,0,0.394584402849391,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.886351143382302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82637992774971,3.97614844904652,1.22583065500418,0,0,0,0,0,1.76173714308272,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65418642901582,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,3.53876168215693,1.251909307065,1.72022758707021,1.55300672151593,2.11127770000704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,2.2387947355906,0,0.368211900503681,0,0,0,1.83302179374359,0,1.63814457288021,0,0,0,0,0,0,0,0,0,2.76185667914776,2.8339315265117,0.159633859057151,2.87162909937057,0,1.45230230174858,1.29180516505481,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.607838261565552,2.34323429584154,2.27355476151302,0.507326481551255,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,3.73833531372574,0.920818829879887,0,0,0,10.5267445243721,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35570160537934,0.297046400327086,2.113278637917,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,1.49581278420012,0,0,0,0,0,0.252332849670158,0,0,0.101988829741982,0,0,0,0,0,0,0.827463966895162,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | ||
|short_description=p7@LAMP5 | |short_description=p7@LAMP5 | ||
}} | }} |
Latest revision as of 17:32, 17 September 2015
Short description: | p7@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LAMP5_5end |
Coexpression cluster: | C2627_biphenotypic_acute_putamen_caudate_Dendritic_hippocampus_amygdala |
Association with transcript: | -65bp_to_ENST00000427562, uc002wni.1, uc010zrc.1_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.02e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.90e-09 | 31 |
hematologic cancer | 8.96e-08 | 51 |
immune system cancer | 8.96e-08 | 51 |
leukemia | 3.55e-07 | 39 |