FFCP PHASE1:Hg19::chr6:108487289..108487302,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7101 | |EntrezGene=7101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7973 | |HGNC=7973 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y466 | |UniProt=Q9Y466 | ||
|association_with_transcript=27bp_to_ENST00000368986_5end | |association_with_transcript=27bp_to_ENST00000368986_5end | ||
|cluster_id=chr6:108487289..108487302,+ | |||
|coexpression_cluster_id=C4542 | |||
|description=CAGE_peak_1_at_NR2E1_5end | |description=CAGE_peak_1_at_NR2E1_5end | ||
|id=chr6:108487289..108487302,+ | |id=chr6:108487289..108487302,+ | ||
|ontology_enrichment_celltype=CL:0002605!4.57e-10!3;CL:0000047!5.60e-09!8;CL:0002319!1.37e-08!25;CL:0000128!7.65e-07!7;CL:0000126!7.65e-07!7;CL:0000127!7.65e-07!7;CL:0002453!7.65e-07!7 | |ontology_enrichment_celltype=CL:0002605!4.57e-10!3;CL:0000047!5.60e-09!8;CL:0002319!1.37e-08!25;CL:0000128!7.65e-07!7;CL:0000126!7.65e-07!7;CL:0000127!7.65e-07!7;CL:0002453!7.65e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002605;7.93e-14;3!CL:0000047;2.14e-09;2!CL:0002319;8.60e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,8.63e-14,3;CL:0000047,1.29e-08,8;CL:0002319,8.56e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.34e-13;82!UBERON:0010122;8.92e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.40e-86!34;UBERON:0002780!4.57e-84!41;UBERON:0001890!4.57e-84!41;UBERON:0006240!4.57e-84!41;UBERON:0002791!5.27e-84!33;UBERON:0003080!7.36e-82!42;UBERON:0001869!8.89e-82!32;UBERON:0002020!4.54e-81!34;UBERON:0003528!4.54e-81!34;UBERON:0005743!2.74e-74!86;UBERON:0001017!4.37e-72!82;UBERON:0003056!4.96e-70!61;UBERON:0001049!5.93e-68!57;UBERON:0005068!5.93e-68!57;UBERON:0006241!5.93e-68!57;UBERON:0007135!5.93e-68!57;UBERON:0000073!4.08e-66!94;UBERON:0001016!4.08e-66!94;UBERON:0000955!1.06e-65!69;UBERON:0006238!1.06e-65!69;UBERON:0002616!2.63e-65!59;UBERON:0000956!3.33e-63!25;UBERON:0000203!3.33e-63!25;UBERON:0003075!9.33e-57!86;UBERON:0007284!9.33e-57!86;UBERON:0002619!1.09e-54!22;UBERON:0002346!1.05e-53!90;UBERON:0001950!1.55e-49!20;UBERON:0000033!1.70e-43!123;UBERON:0000153!1.01e-42!129;UBERON:0007811!1.01e-42!129;UBERON:0004121!1.35e-37!169;UBERON:0000924!2.05e-36!173;UBERON:0006601!2.05e-36!173;UBERON:0007023!2.94e-28!115;UBERON:0002420!1.22e-24!9;UBERON:0007245!1.22e-24!9;UBERON:0010009!1.22e-24!9;UBERON:0010011!1.22e-24!9;UBERON:0000454!1.22e-24!9;UBERON:0009663!2.12e-19!7;UBERON:0002308!7.04e-19!9;UBERON:0000125!7.04e-19!9;UBERON:0001871!1.06e-16!7;UBERON:0000200!1.68e-16!6;UBERON:0000349!1.24e-14!5;UBERON:0000025!2.44e-14!194;UBERON:0001872!2.48e-14!5;UBERON:0002021!3.75e-14!5;UBERON:0000064!6.80e-14!219;UBERON:0000369!1.35e-12!4;UBERON:0002435!1.35e-12!4;UBERON:0000204!1.35e-12!4;UBERON:0010082!1.35e-12!4;UBERON:0000483!4.16e-11!309;UBERON:0000119!6.99e-11!312;UBERON:0000475!1.61e-10!365;UBERON:0004111!3.32e-10!241;UBERON:0005383!5.77e-10!3;UBERON:0005382!5.77e-10!3;UBERON:0000477!2.04e-09!286;UBERON:0002771!4.29e-09!3;UBERON:0000481!7.40e-08!347;UBERON:0001873!2.87e-07!2;UBERON:0010122!2.87e-07!2;UBERON:0001876!6.28e-07!2;UBERON:0001870!8.84e-07!2;UBERON:0001954!9.90e-07!2;UBERON:0003022!9.90e-07!2;UBERON:0002421!9.90e-07!2;UBERON:0002600!9.90e-07!2 | |ontology_enrichment_uberon=UBERON:0001893!1.40e-86!34;UBERON:0002780!4.57e-84!41;UBERON:0001890!4.57e-84!41;UBERON:0006240!4.57e-84!41;UBERON:0002791!5.27e-84!33;UBERON:0003080!7.36e-82!42;UBERON:0001869!8.89e-82!32;UBERON:0002020!4.54e-81!34;UBERON:0003528!4.54e-81!34;UBERON:0005743!2.74e-74!86;UBERON:0001017!4.37e-72!82;UBERON:0003056!4.96e-70!61;UBERON:0001049!5.93e-68!57;UBERON:0005068!5.93e-68!57;UBERON:0006241!5.93e-68!57;UBERON:0007135!5.93e-68!57;UBERON:0000073!4.08e-66!94;UBERON:0001016!4.08e-66!94;UBERON:0000955!1.06e-65!69;UBERON:0006238!1.06e-65!69;UBERON:0002616!2.63e-65!59;UBERON:0000956!3.33e-63!25;UBERON:0000203!3.33e-63!25;UBERON:0003075!9.33e-57!86;UBERON:0007284!9.33e-57!86;UBERON:0002619!1.09e-54!22;UBERON:0002346!1.05e-53!90;UBERON:0001950!1.55e-49!20;UBERON:0000033!1.70e-43!123;UBERON:0000153!1.01e-42!129;UBERON:0007811!1.01e-42!129;UBERON:0004121!1.35e-37!169;UBERON:0000924!2.05e-36!173;UBERON:0006601!2.05e-36!173;UBERON:0007023!2.94e-28!115;UBERON:0002420!1.22e-24!9;UBERON:0007245!1.22e-24!9;UBERON:0010009!1.22e-24!9;UBERON:0010011!1.22e-24!9;UBERON:0000454!1.22e-24!9;UBERON:0009663!2.12e-19!7;UBERON:0002308!7.04e-19!9;UBERON:0000125!7.04e-19!9;UBERON:0001871!1.06e-16!7;UBERON:0000200!1.68e-16!6;UBERON:0000349!1.24e-14!5;UBERON:0000025!2.44e-14!194;UBERON:0001872!2.48e-14!5;UBERON:0002021!3.75e-14!5;UBERON:0000064!6.80e-14!219;UBERON:0000369!1.35e-12!4;UBERON:0002435!1.35e-12!4;UBERON:0000204!1.35e-12!4;UBERON:0010082!1.35e-12!4;UBERON:0000483!4.16e-11!309;UBERON:0000119!6.99e-11!312;UBERON:0000475!1.61e-10!365;UBERON:0004111!3.32e-10!241;UBERON:0005383!5.77e-10!3;UBERON:0005382!5.77e-10!3;UBERON:0000477!2.04e-09!286;UBERON:0002771!4.29e-09!3;UBERON:0000481!7.40e-08!347;UBERON:0001873!2.87e-07!2;UBERON:0010122!2.87e-07!2;UBERON:0001876!6.28e-07!2;UBERON:0001870!8.84e-07!2;UBERON:0001954!9.90e-07!2;UBERON:0003022!9.90e-07!2;UBERON:0002421!9.90e-07!2;UBERON:0002600!9.90e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.69e-107;34!UBERON:0001869;4.21e-106;32!UBERON:0002791;5.38e-106;32!UBERON:0003528;9.28e-96;34!UBERON:0002020;9.28e-96;34!UBERON:0000956;7.90e-91;25!UBERON:0000203;7.90e-91;25!UBERON:0002780;2.30e-86;41!UBERON:0001890;2.30e-86;41!UBERON:0002619;1.77e-78;22!UBERON:0001950;5.44e-71;20!UBERON:0000073;3.07e-53;53!UBERON:0002616;3.07e-53;53!UBERON:0000955;3.75e-36;68!UBERON:0002420;1.31e-34;9!UBERON:0007245;1.31e-34;9!UBERON:0010009;1.31e-34;9!UBERON:0010011;1.31e-34;9!UBERON:0000454;1.31e-34;9!UBERON:0001017;1.89e-34;75!UBERON:0001016;3.92e-27;83!UBERON:0009663;4.01e-27;7!UBERON:0000200;5.57e-23;6!UBERON:0000125;6.92e-21;9!UBERON:0002308;6.92e-21;9!UBERON:0000349;2.83e-20;5!UBERON:0001872;6.03e-20;5!UBERON:0001871;6.47e-20;6!UBERON:0002021;9.52e-20;5!UBERON:0000369;2.29e-17;4!UBERON:0002435;2.29e-17;4!UBERON:0000204;2.29e-17;4!UBERON:0005383;1.26e-13;3!UBERON:0005382;1.26e-13;3!UBERON:0001870;9.89e-13;3!UBERON:0007023;4.33e-11;114!UBERON:0011216;7.68e-11;132!UBERON:0001873;8.92e-10;2!UBERON:0001876;3.30e-09;2!UBERON:0002702;4.29e-09;2!UBERON:0001954;4.85e-09;2!UBERON:0003022;4.85e-09;2!UBERON:0002421;4.85e-09;2!UBERON:0002600;4.85e-09;2!UBERON:0002771;9.95e-09;2!UBERON:0001897;2.05e-08;2!UBERON:0010225;2.05e-08;2!UBERON:0010314;2.37e-08;132!UBERON:0001875;2.79e-08;2!UBERON:0006514;2.79e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001893,1.43e-124,34;UBERON:0002780,1.09e-121,41;UBERON:0001890,1.09e-121,41;UBERON:0003080,1.09e-121,41;UBERON:0006240,1.09e-121,41;UBERON:0001869,1.27e-117,32;UBERON:0002791,2.39e-117,32;UBERON:0003528,3.36e-110,34;UBERON:0002020,3.36e-110,34;UBERON:0003056,7.01e-94,61;UBERON:0000073,9.25e-93,53;UBERON:0002616,9.25e-93,53;UBERON:0000956,9.44e-91,25;UBERON:0000203,9.44e-91,25;UBERON:0001049,1.98e-87,56;UBERON:0005068,1.98e-87,56;UBERON:0006241,1.98e-87,56;UBERON:0007135,1.98e-87,56;UBERON:0001017,1.53e-84,81;UBERON:0002619,1.95e-78,22;UBERON:0000955,3.90e-78,68;UBERON:0006238,3.90e-78,68;UBERON:0001016,2.31e-75,89;UBERON:0001950,5.56e-71,20;UBERON:0003075,7.10e-68,82;UBERON:0007284,7.10e-68,82;UBERON:0002346,2.41e-64,86;UBERON:0010371,8.83e-52,104;UBERON:0004121,2.08e-41,171;UBERON:0000924,2.08e-41,171;UBERON:0006601,2.08e-41,171;UBERON:0010314,2.22e-41,132;UBERON:0002420,8.48e-35,9;UBERON:0007245,8.48e-35,9;UBERON:0010009,8.48e-35,9;UBERON:0010011,8.48e-35,9;UBERON:0000454,8.48e-35,9;UBERON:0007023,2.35e-34,114;UBERON:0011216,4.67e-28,223;UBERON:0009663,3.10e-27,7;UBERON:0000200,4.67e-23,6;UBERON:0000125,5.68e-21,9;UBERON:0002308,5.68e-21,9;UBERON:0000349,2.31e-20,5;UBERON:0001871,5.66e-20,6;UBERON:0001872,6.28e-20,5;UBERON:0000025,8.59e-20,192;UBERON:0002021,1.14e-19,5;UBERON:0000369,1.98e-17,4;UBERON:0002435,1.98e-17,4;UBERON:0000204,1.98e-17,4;UBERON:0010082,1.98e-17,4;UBERON:0004111,3.65e-14,240;UBERON:0005383,1.21e-13,3;UBERON:0005382,1.21e-13,3;UBERON:0001870,1.01e-12,3;UBERON:0000483,8.23e-12,306;UBERON:0000119,1.30e-11,309;UBERON:0001873,8.92e-10,2;UBERON:0010122,8.92e-10,2;UBERON:0001876,2.74e-09,2;UBERON:0002702,4.12e-09,2;UBERON:0001954,5.26e-09,2;UBERON:0003022,5.26e-09,2;UBERON:0002421,5.26e-09,2;UBERON:0002600,5.26e-09,2;UBERON:0002771,9.57e-09,2;UBERON:0001897,2.01e-08,2;UBERON:0010225,2.01e-08,2;UBERON:0001875,2.54e-08,2;UBERON:0006514,2.54e-08,2;UBERON:0000923,3.44e-07,560;UBERON:0010316,3.44e-07,560;UBERON:0005291,3.44e-07,560;UBERON:0006598,3.44e-07,560;UBERON:0010317,3.44e-07,560;UBERON:0002532,3.44e-07,560;UBERON:0002050,4.57e-07,564;UBERON:0000922,6.24e-07,592 | |||
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|short_description=p1@NR2E1 | |short_description=p1@NR2E1 | ||
}} | }} |
Latest revision as of 17:16, 19 September 2015
Short description: | p1@NR2E1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NR2E1_5end |
Coexpression cluster: | C4542_Astrocyte_eye_caudate_Neural_amygdala_brain_hippocampus |
Association with transcript: | 27bp_to_ENST00000368986_5end |
EntrezGene: | NR2E1 |
HGNC: | 7973 |
UniProt: | Q9Y466 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 8.63e-14 | 3 |
neuronal stem cell | 1.29e-08 | 8 |
neural cell | 8.56e-07 | 25 |