FFCP PHASE1:Hg19::chr5:146833222..146833261,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1809 | |EntrezGene=1809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |HGNC=3015 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWI3,Q14195,Q8IXW6 | |UniProt=F5GWI3,Q14195,Q8IXW6 | ||
|association_with_transcript=0bp_to_ENST00000507309,ENST00000519672,ENST00000534907,NM_001387,uc003lon.1_5end | |association_with_transcript=0bp_to_ENST00000507309,ENST00000519672,ENST00000534907,NM_001387,uc003lon.1_5end | ||
|cluster_id=chr5:146833222..146833261,- | |||
|coexpression_cluster_id=C1954 | |||
|description=CAGE_peak_1_at_DPYSL3_5end | |description=CAGE_peak_1_at_DPYSL3_5end | ||
|id=chr5:146833222..146833261,- | |id=chr5:146833222..146833261,- | ||
|ontology_enrichment_celltype=CL:0000055!5.30e-13!180;CL:0000359!4.36e-11!32;CL:0002319!6.02e-10!25;CL:0000393!1.41e-09!60;CL:0000211!1.41e-09!60;CL:0000192!2.95e-09!42;CL:0000514!2.95e-09!42;CL:0000133!3.52e-09!59;CL:0000183!3.23e-07!59;CL:0000187!6.04e-07!54 | |ontology_enrichment_celltype=CL:0000055!5.30e-13!180;CL:0000359!4.36e-11!32;CL:0002319!6.02e-10!25;CL:0000393!1.41e-09!60;CL:0000211!1.41e-09!60;CL:0000192!2.95e-09!42;CL:0000514!2.95e-09!42;CL:0000133!3.52e-09!59;CL:0000183!3.23e-07!59;CL:0000187!6.04e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.62e-10;32!CL:0002319;2.27e-09;25!CL:0000192;9.91e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.20e-11,32;CL:0002319,1.88e-09,25;CL:0000192,6.49e-09,43;CL:0000514,6.49e-09,43;CL:0000133,7.25e-09,59;CL:0000393,1.66e-08,61;CL:0000211,1.66e-08,61;CL:0000047,7.60e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000514;9.91e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.63e-27!82;UBERON:0005743!6.40e-27!86;UBERON:0000073!3.29e-26!94;UBERON:0001016!3.29e-26!94;UBERON:0000468!5.21e-25!659;UBERON:0000025!3.30e-24!194;UBERON:0003075!4.24e-23!86;UBERON:0007284!4.24e-23!86;UBERON:0004121!5.36e-23!169;UBERON:0004111!2.29e-22!241;UBERON:0000924!1.65e-21!173;UBERON:0006601!1.65e-21!173;UBERON:0000922!2.08e-21!612;UBERON:0002346!8.25e-21!90;UBERON:0000477!2.95e-20!286;UBERON:0000480!6.56e-20!626;UBERON:0000955!8.80e-20!69;UBERON:0006238!8.80e-20!69;UBERON:0000483!1.21e-19!309;UBERON:0000467!1.29e-19!625;UBERON:0000119!3.05e-19!312;UBERON:0001049!5.21e-19!57;UBERON:0005068!5.21e-19!57;UBERON:0006241!5.21e-19!57;UBERON:0007135!5.21e-19!57;UBERON:0002050!3.82e-18!605;UBERON:0005423!3.82e-18!605;UBERON:0007023!5.66e-18!115;UBERON:0000923!8.71e-18!604;UBERON:0005291!8.71e-18!604;UBERON:0006598!8.71e-18!604;UBERON:0002532!8.71e-18!604;UBERON:0004872!3.04e-17!84;UBERON:0002616!4.52e-17!59;UBERON:0000033!4.04e-16!123;UBERON:0000475!1.62e-15!365;UBERON:0000153!3.25e-15!129;UBERON:0007811!3.25e-15!129;UBERON:0003056!1.19e-14!61;UBERON:0000481!3.70e-14!347;UBERON:0001637!4.52e-14!42;UBERON:0003509!4.52e-14!42;UBERON:0004572!4.52e-14!42;UBERON:0001981!1.55e-13!60;UBERON:0007500!1.55e-13!60;UBERON:0004537!1.55e-13!60;UBERON:0006965!1.55e-13!60;UBERON:0003080!2.28e-13!42;UBERON:0002780!2.80e-13!41;UBERON:0001890!2.80e-13!41;UBERON:0006240!2.80e-13!41;UBERON:0002049!4.72e-13!79;UBERON:0007798!4.72e-13!79;UBERON:0002020!2.44e-12!34;UBERON:0003528!2.44e-12!34;UBERON:0001893!6.55e-12!34;UBERON:0002791!8.33e-12!33;UBERON:0000055!1.47e-11!69;UBERON:0001869!2.76e-11!32;UBERON:0004573!4.66e-11!33;UBERON:0004571!4.66e-11!33;UBERON:0003914!6.79e-11!118;UBERON:0000062!2.81e-10!511;UBERON:0000064!5.46e-10!219;UBERON:0001009!1.55e-09!113;UBERON:0004535!2.12e-09!110;UBERON:0000956!4.79e-09!25;UBERON:0000203!4.79e-09!25;UBERON:0002385!4.00e-08!63;UBERON:0001015!4.00e-08!63;UBERON:0000383!4.00e-08!63;UBERON:0000948!1.14e-07!24;UBERON:0005498!1.14e-07!24;UBERON:0004140!1.14e-07!24;UBERON:0009881!1.14e-07!24;UBERON:0004141!1.14e-07!24;UBERON:0003084!1.14e-07!24;UBERON:0007005!1.14e-07!24;UBERON:0004139!1.14e-07!24;UBERON:0004291!1.14e-07!24;UBERON:0001134!1.26e-07!61;UBERON:0002036!1.26e-07!61;UBERON:0003082!1.26e-07!61;UBERON:0000947!1.43e-07!21;UBERON:0010191!1.43e-07!21;UBERON:0007100!1.54e-07!27;UBERON:0002619!1.78e-07!22;UBERON:0003076!5.45e-07!15;UBERON:0003057!5.45e-07!15 | |ontology_enrichment_uberon=UBERON:0001017!5.63e-27!82;UBERON:0005743!6.40e-27!86;UBERON:0000073!3.29e-26!94;UBERON:0001016!3.29e-26!94;UBERON:0000468!5.21e-25!659;UBERON:0000025!3.30e-24!194;UBERON:0003075!4.24e-23!86;UBERON:0007284!4.24e-23!86;UBERON:0004121!5.36e-23!169;UBERON:0004111!2.29e-22!241;UBERON:0000924!1.65e-21!173;UBERON:0006601!1.65e-21!173;UBERON:0000922!2.08e-21!612;UBERON:0002346!8.25e-21!90;UBERON:0000477!2.95e-20!286;UBERON:0000480!6.56e-20!626;UBERON:0000955!8.80e-20!69;UBERON:0006238!8.80e-20!69;UBERON:0000483!1.21e-19!309;UBERON:0000467!1.29e-19!625;UBERON:0000119!3.05e-19!312;UBERON:0001049!5.21e-19!57;UBERON:0005068!5.21e-19!57;UBERON:0006241!5.21e-19!57;UBERON:0007135!5.21e-19!57;UBERON:0002050!3.82e-18!605;UBERON:0005423!3.82e-18!605;UBERON:0007023!5.66e-18!115;UBERON:0000923!8.71e-18!604;UBERON:0005291!8.71e-18!604;UBERON:0006598!8.71e-18!604;UBERON:0002532!8.71e-18!604;UBERON:0004872!3.04e-17!84;UBERON:0002616!4.52e-17!59;UBERON:0000033!4.04e-16!123;UBERON:0000475!1.62e-15!365;UBERON:0000153!3.25e-15!129;UBERON:0007811!3.25e-15!129;UBERON:0003056!1.19e-14!61;UBERON:0000481!3.70e-14!347;UBERON:0001637!4.52e-14!42;UBERON:0003509!4.52e-14!42;UBERON:0004572!4.52e-14!42;UBERON:0001981!1.55e-13!60;UBERON:0007500!1.55e-13!60;UBERON:0004537!1.55e-13!60;UBERON:0006965!1.55e-13!60;UBERON:0003080!2.28e-13!42;UBERON:0002780!2.80e-13!41;UBERON:0001890!2.80e-13!41;UBERON:0006240!2.80e-13!41;UBERON:0002049!4.72e-13!79;UBERON:0007798!4.72e-13!79;UBERON:0002020!2.44e-12!34;UBERON:0003528!2.44e-12!34;UBERON:0001893!6.55e-12!34;UBERON:0002791!8.33e-12!33;UBERON:0000055!1.47e-11!69;UBERON:0001869!2.76e-11!32;UBERON:0004573!4.66e-11!33;UBERON:0004571!4.66e-11!33;UBERON:0003914!6.79e-11!118;UBERON:0000062!2.81e-10!511;UBERON:0000064!5.46e-10!219;UBERON:0001009!1.55e-09!113;UBERON:0004535!2.12e-09!110;UBERON:0000956!4.79e-09!25;UBERON:0000203!4.79e-09!25;UBERON:0002385!4.00e-08!63;UBERON:0001015!4.00e-08!63;UBERON:0000383!4.00e-08!63;UBERON:0000948!1.14e-07!24;UBERON:0005498!1.14e-07!24;UBERON:0004140!1.14e-07!24;UBERON:0009881!1.14e-07!24;UBERON:0004141!1.14e-07!24;UBERON:0003084!1.14e-07!24;UBERON:0007005!1.14e-07!24;UBERON:0004139!1.14e-07!24;UBERON:0004291!1.14e-07!24;UBERON:0001134!1.26e-07!61;UBERON:0002036!1.26e-07!61;UBERON:0003082!1.26e-07!61;UBERON:0000947!1.43e-07!21;UBERON:0010191!1.43e-07!21;UBERON:0007100!1.54e-07!27;UBERON:0002619!1.78e-07!22;UBERON:0003076!5.45e-07!15;UBERON:0003057!5.45e-07!15 | ||
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| ||
|short_description=p1@DPYSL3 | |short_description=p1@DPYSL3 | ||
}} | }} |
Latest revision as of 22:05, 15 September 2015
Short description: | p1@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DPYSL3_5end |
Coexpression cluster: | C1954_occipital_parietal_temporal_duodenum_brain_Neurons_medulloblastoma |
Association with transcript: | 0bp_to_ENST00000507309, ENST00000519672, ENST00000534907, NM_001387, uc003lon.1_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | F5GWI3Q14195Q8IXW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.20e-11 | 32 |
neural cell | 1.88e-09 | 25 |
smooth muscle cell | 6.49e-09 | 43 |
smooth muscle myoblast | 6.49e-09 | 43 |
neurectodermal cell | 7.25e-09 | 59 |
electrically responsive cell | 1.66e-08 | 61 |
electrically active cell | 1.66e-08 | 61 |
neuronal stem cell | 7.60e-07 | 8 |