FFCP PHASE1:Hg19::chr9:101471138..101471256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9568 | |EntrezGene=9568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4507 | |HGNC=4507 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc004ays.2_5end | |association_with_transcript=0bp_to_uc004ays.2_5end | ||
|cluster_id=chr9:101471138..101471256,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_GABBR2_5end | |description=CAGE_peak_1_at_GABBR2_5end | ||
|id=chr9:101471138..101471256,- | |id=chr9:101471138..101471256,- | ||
|ontology_enrichment_celltype=CL:0000055!3.62e-11!180;CL:0000192!2.39e-10!42;CL:0000514!2.39e-10!42;CL:0000359!2.48e-10!32;CL:0000393!9.81e-10!60;CL:0000211!9.81e-10!60;CL:0000071!1.26e-09!18;CL:0002546!1.26e-09!18;CL:0000187!3.55e-08!54;CL:0000680!1.03e-07!57;CL:0000056!1.03e-07!57;CL:0000355!1.03e-07!57;CL:0000222!1.18e-07!119;CL:1000413!1.25e-07!9;CL:0000183!2.85e-07!59;CL:0002139!3.02e-07!24 | |ontology_enrichment_celltype=CL:0000055!3.62e-11!180;CL:0000192!2.39e-10!42;CL:0000514!2.39e-10!42;CL:0000359!2.48e-10!32;CL:0000393!9.81e-10!60;CL:0000211!9.81e-10!60;CL:0000071!1.26e-09!18;CL:0002546!1.26e-09!18;CL:0000187!3.55e-08!54;CL:0000680!1.03e-07!57;CL:0000056!1.03e-07!57;CL:0000355!1.03e-07!57;CL:0000222!1.18e-07!119;CL:1000413!1.25e-07!9;CL:0000183!2.85e-07!59;CL:0002139!3.02e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000071;3.63e-13;18!CL:1000413;4.70e-10;9!CL:0002139;1.07e-08;24!CL:0002620;1.48e-08;23!CL:0002544;4.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,2.49e-13,18;CL:0002546,2.49e-13,18;CL:1000413,4.64e-10,9;CL:0002139,8.26e-09,24;CL:0002620,1.58e-08,23;CL:0000115,2.15e-07,36;CL:0002544,3.85e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.63e-13;18!UBERON:0006601;4.09e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.81e-39!82;UBERON:0005743!3.83e-37!86;UBERON:0001049!2.86e-36!57;UBERON:0005068!2.86e-36!57;UBERON:0006241!2.86e-36!57;UBERON:0007135!2.86e-36!57;UBERON:0000025!8.83e-36!194;UBERON:0000073!4.43e-34!94;UBERON:0001016!4.43e-34!94;UBERON:0000955!2.42e-32!69;UBERON:0006238!2.42e-32!69;UBERON:0002780!2.98e-31!41;UBERON:0001890!2.98e-31!41;UBERON:0006240!2.98e-31!41;UBERON:0002616!2.16e-30!59;UBERON:0003080!4.64e-30!42;UBERON:0001893!7.03e-29!34;UBERON:0002020!8.39e-29!34;UBERON:0003528!8.39e-29!34;UBERON:0000483!1.56e-28!309;UBERON:0000119!3.65e-28!312;UBERON:0002791!6.15e-28!33;UBERON:0001869!1.05e-27!32;UBERON:0003075!4.31e-26!86;UBERON:0007284!4.31e-26!86;UBERON:0004111!1.77e-25!241;UBERON:0000477!2.58e-24!286;UBERON:0002346!9.07e-24!90;UBERON:0000956!9.94e-23!25;UBERON:0000203!9.94e-23!25;UBERON:0002619!5.78e-22!22;UBERON:0003056!1.24e-21!61;UBERON:0001950!2.90e-20!20;UBERON:0001981!4.37e-20!60;UBERON:0007500!4.37e-20!60;UBERON:0004537!4.37e-20!60;UBERON:0006965!4.37e-20!60;UBERON:0001637!9.31e-19!42;UBERON:0003509!9.31e-19!42;UBERON:0004572!9.31e-19!42;UBERON:0000055!2.03e-18!69;UBERON:0000475!1.15e-17!365;UBERON:0002049!4.68e-17!79;UBERON:0007798!4.68e-17!79;UBERON:0000033!1.92e-16!123;UBERON:0004573!1.22e-15!33;UBERON:0004571!1.22e-15!33;UBERON:0000153!2.03e-15!129;UBERON:0007811!2.03e-15!129;UBERON:0004121!3.49e-15!169;UBERON:0004872!3.69e-15!84;UBERON:0000467!2.75e-14!625;UBERON:0000924!3.67e-14!173;UBERON:0006601!3.67e-14!173;UBERON:0000480!3.82e-14!626;UBERON:0000468!6.63e-14!659;UBERON:0007023!2.42e-13!115;UBERON:0001009!5.55e-12!113;UBERON:0003914!1.76e-11!118;UBERON:0004535!1.89e-11!110;UBERON:0000947!4.27e-10!21;UBERON:0010191!4.27e-10!21;UBERON:0001986!1.26e-09!18;UBERON:0004638!1.26e-09!18;UBERON:0004852!1.26e-09!18;UBERON:0006914!2.54e-09!25;UBERON:0000922!6.52e-09!612;UBERON:0000487!1.04e-08!22;UBERON:0001871!1.52e-08!7;UBERON:0000490!2.20e-08!138;UBERON:0000481!2.40e-08!347;UBERON:0002050!4.11e-08!605;UBERON:0005423!4.11e-08!605;UBERON:0004290!6.62e-08!70;UBERON:0000923!6.68e-08!604;UBERON:0005291!6.68e-08!604;UBERON:0006598!6.68e-08!604;UBERON:0002532!6.68e-08!604;UBERON:0002420!1.10e-07!9;UBERON:0007245!1.10e-07!9;UBERON:0010009!1.10e-07!9;UBERON:0010011!1.10e-07!9;UBERON:0000454!1.10e-07!9;UBERON:0003915!1.25e-07!9;UBERON:0004700!1.25e-07!9;UBERON:0001917!1.25e-07!9;UBERON:0003076!1.42e-07!15;UBERON:0003057!1.42e-07!15;UBERON:0002308!1.58e-07!9;UBERON:0000125!1.58e-07!9;UBERON:0001134!4.35e-07!61;UBERON:0002036!4.35e-07!61;UBERON:0003082!4.35e-07!61;UBERON:0000200!5.21e-07!6;UBERON:0000914!6.37e-07!83;UBERON:0002329!6.37e-07!83;UBERON:0003077!6.37e-07!83;UBERON:0003059!6.37e-07!83;UBERON:0007282!6.37e-07!83;UBERON:0009618!6.37e-07!83;UBERON:0007285!6.37e-07!83 | |ontology_enrichment_uberon=UBERON:0001017!5.81e-39!82;UBERON:0005743!3.83e-37!86;UBERON:0001049!2.86e-36!57;UBERON:0005068!2.86e-36!57;UBERON:0006241!2.86e-36!57;UBERON:0007135!2.86e-36!57;UBERON:0000025!8.83e-36!194;UBERON:0000073!4.43e-34!94;UBERON:0001016!4.43e-34!94;UBERON:0000955!2.42e-32!69;UBERON:0006238!2.42e-32!69;UBERON:0002780!2.98e-31!41;UBERON:0001890!2.98e-31!41;UBERON:0006240!2.98e-31!41;UBERON:0002616!2.16e-30!59;UBERON:0003080!4.64e-30!42;UBERON:0001893!7.03e-29!34;UBERON:0002020!8.39e-29!34;UBERON:0003528!8.39e-29!34;UBERON:0000483!1.56e-28!309;UBERON:0000119!3.65e-28!312;UBERON:0002791!6.15e-28!33;UBERON:0001869!1.05e-27!32;UBERON:0003075!4.31e-26!86;UBERON:0007284!4.31e-26!86;UBERON:0004111!1.77e-25!241;UBERON:0000477!2.58e-24!286;UBERON:0002346!9.07e-24!90;UBERON:0000956!9.94e-23!25;UBERON:0000203!9.94e-23!25;UBERON:0002619!5.78e-22!22;UBERON:0003056!1.24e-21!61;UBERON:0001950!2.90e-20!20;UBERON:0001981!4.37e-20!60;UBERON:0007500!4.37e-20!60;UBERON:0004537!4.37e-20!60;UBERON:0006965!4.37e-20!60;UBERON:0001637!9.31e-19!42;UBERON:0003509!9.31e-19!42;UBERON:0004572!9.31e-19!42;UBERON:0000055!2.03e-18!69;UBERON:0000475!1.15e-17!365;UBERON:0002049!4.68e-17!79;UBERON:0007798!4.68e-17!79;UBERON:0000033!1.92e-16!123;UBERON:0004573!1.22e-15!33;UBERON:0004571!1.22e-15!33;UBERON:0000153!2.03e-15!129;UBERON:0007811!2.03e-15!129;UBERON:0004121!3.49e-15!169;UBERON:0004872!3.69e-15!84;UBERON:0000467!2.75e-14!625;UBERON:0000924!3.67e-14!173;UBERON:0006601!3.67e-14!173;UBERON:0000480!3.82e-14!626;UBERON:0000468!6.63e-14!659;UBERON:0007023!2.42e-13!115;UBERON:0001009!5.55e-12!113;UBERON:0003914!1.76e-11!118;UBERON:0004535!1.89e-11!110;UBERON:0000947!4.27e-10!21;UBERON:0010191!4.27e-10!21;UBERON:0001986!1.26e-09!18;UBERON:0004638!1.26e-09!18;UBERON:0004852!1.26e-09!18;UBERON:0006914!2.54e-09!25;UBERON:0000922!6.52e-09!612;UBERON:0000487!1.04e-08!22;UBERON:0001871!1.52e-08!7;UBERON:0000490!2.20e-08!138;UBERON:0000481!2.40e-08!347;UBERON:0002050!4.11e-08!605;UBERON:0005423!4.11e-08!605;UBERON:0004290!6.62e-08!70;UBERON:0000923!6.68e-08!604;UBERON:0005291!6.68e-08!604;UBERON:0006598!6.68e-08!604;UBERON:0002532!6.68e-08!604;UBERON:0002420!1.10e-07!9;UBERON:0007245!1.10e-07!9;UBERON:0010009!1.10e-07!9;UBERON:0010011!1.10e-07!9;UBERON:0000454!1.10e-07!9;UBERON:0003915!1.25e-07!9;UBERON:0004700!1.25e-07!9;UBERON:0001917!1.25e-07!9;UBERON:0003076!1.42e-07!15;UBERON:0003057!1.42e-07!15;UBERON:0002308!1.58e-07!9;UBERON:0000125!1.58e-07!9;UBERON:0001134!4.35e-07!61;UBERON:0002036!4.35e-07!61;UBERON:0003082!4.35e-07!61;UBERON:0000200!5.21e-07!6;UBERON:0000914!6.37e-07!83;UBERON:0002329!6.37e-07!83;UBERON:0003077!6.37e-07!83;UBERON:0003059!6.37e-07!83;UBERON:0007282!6.37e-07!83;UBERON:0009618!6.37e-07!83;UBERON:0007285!6.37e-07!83 | ||
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| ||
|short_description=p1@GABBR2 | |short_description=p1@GABBR2 | ||
}} | }} |
Latest revision as of 19:06, 19 September 2015
Short description: | p1@GABBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GABBR2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_uc004ays.2_5end |
EntrezGene: | GABBR2 |
HGNC: | 4507 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 2.49e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.49e-13 | 18 |
endothelial cell of artery | 4.64e-10 | 9 |
endothelial cell of vascular tree | 8.26e-09 | 24 |
skin fibroblast | 1.58e-08 | 23 |
endothelial cell | 2.15e-07 | 36 |
aortic endothelial cell | 3.85e-07 | 6 |