FFCP PHASE1:Hg19::chr6:108487289..108487302,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7101 | |EntrezGene=7101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7973 | |HGNC=7973 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y466 | |UniProt=Q9Y466 | ||
|association_with_transcript=27bp_to_ENST00000368986_5end | |association_with_transcript=27bp_to_ENST00000368986_5end | ||
|cluster_id=chr6:108487289..108487302,+ | |||
|coexpression_cluster_id=C4542 | |coexpression_cluster_id=C4542 | ||
|description=CAGE_peak_1_at_NR2E1_5end | |description=CAGE_peak_1_at_NR2E1_5end | ||
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|ontology_enrichment_celltype=CL:0002605!4.57e-10!3;CL:0000047!5.60e-09!8;CL:0002319!1.37e-08!25;CL:0000128!7.65e-07!7;CL:0000126!7.65e-07!7;CL:0000127!7.65e-07!7;CL:0002453!7.65e-07!7 | |ontology_enrichment_celltype=CL:0002605!4.57e-10!3;CL:0000047!5.60e-09!8;CL:0002319!1.37e-08!25;CL:0000128!7.65e-07!7;CL:0000126!7.65e-07!7;CL:0000127!7.65e-07!7;CL:0002453!7.65e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002605;7.93e-14;3!CL:0000047;2.14e-09;2!CL:0002319;8.60e-07;25 | |ontology_enrichment_celltype_v019=CL:0002605;7.93e-14;3!CL:0000047;2.14e-09;2!CL:0002319;8.60e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,8.63e-14,3;CL:0000047,1.29e-08,8;CL:0002319,8.56e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.34e-13;82!UBERON:0010122;8.92e-10;2 | |ontology_enrichment_development_v019=UBERON:0006601;7.34e-13;82!UBERON:0010122;8.92e-10;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.40e-86!34;UBERON:0002780!4.57e-84!41;UBERON:0001890!4.57e-84!41;UBERON:0006240!4.57e-84!41;UBERON:0002791!5.27e-84!33;UBERON:0003080!7.36e-82!42;UBERON:0001869!8.89e-82!32;UBERON:0002020!4.54e-81!34;UBERON:0003528!4.54e-81!34;UBERON:0005743!2.74e-74!86;UBERON:0001017!4.37e-72!82;UBERON:0003056!4.96e-70!61;UBERON:0001049!5.93e-68!57;UBERON:0005068!5.93e-68!57;UBERON:0006241!5.93e-68!57;UBERON:0007135!5.93e-68!57;UBERON:0000073!4.08e-66!94;UBERON:0001016!4.08e-66!94;UBERON:0000955!1.06e-65!69;UBERON:0006238!1.06e-65!69;UBERON:0002616!2.63e-65!59;UBERON:0000956!3.33e-63!25;UBERON:0000203!3.33e-63!25;UBERON:0003075!9.33e-57!86;UBERON:0007284!9.33e-57!86;UBERON:0002619!1.09e-54!22;UBERON:0002346!1.05e-53!90;UBERON:0001950!1.55e-49!20;UBERON:0000033!1.70e-43!123;UBERON:0000153!1.01e-42!129;UBERON:0007811!1.01e-42!129;UBERON:0004121!1.35e-37!169;UBERON:0000924!2.05e-36!173;UBERON:0006601!2.05e-36!173;UBERON:0007023!2.94e-28!115;UBERON:0002420!1.22e-24!9;UBERON:0007245!1.22e-24!9;UBERON:0010009!1.22e-24!9;UBERON:0010011!1.22e-24!9;UBERON:0000454!1.22e-24!9;UBERON:0009663!2.12e-19!7;UBERON:0002308!7.04e-19!9;UBERON:0000125!7.04e-19!9;UBERON:0001871!1.06e-16!7;UBERON:0000200!1.68e-16!6;UBERON:0000349!1.24e-14!5;UBERON:0000025!2.44e-14!194;UBERON:0001872!2.48e-14!5;UBERON:0002021!3.75e-14!5;UBERON:0000064!6.80e-14!219;UBERON:0000369!1.35e-12!4;UBERON:0002435!1.35e-12!4;UBERON:0000204!1.35e-12!4;UBERON:0010082!1.35e-12!4;UBERON:0000483!4.16e-11!309;UBERON:0000119!6.99e-11!312;UBERON:0000475!1.61e-10!365;UBERON:0004111!3.32e-10!241;UBERON:0005383!5.77e-10!3;UBERON:0005382!5.77e-10!3;UBERON:0000477!2.04e-09!286;UBERON:0002771!4.29e-09!3;UBERON:0000481!7.40e-08!347;UBERON:0001873!2.87e-07!2;UBERON:0010122!2.87e-07!2;UBERON:0001876!6.28e-07!2;UBERON:0001870!8.84e-07!2;UBERON:0001954!9.90e-07!2;UBERON:0003022!9.90e-07!2;UBERON:0002421!9.90e-07!2;UBERON:0002600!9.90e-07!2 | |ontology_enrichment_uberon=UBERON:0001893!1.40e-86!34;UBERON:0002780!4.57e-84!41;UBERON:0001890!4.57e-84!41;UBERON:0006240!4.57e-84!41;UBERON:0002791!5.27e-84!33;UBERON:0003080!7.36e-82!42;UBERON:0001869!8.89e-82!32;UBERON:0002020!4.54e-81!34;UBERON:0003528!4.54e-81!34;UBERON:0005743!2.74e-74!86;UBERON:0001017!4.37e-72!82;UBERON:0003056!4.96e-70!61;UBERON:0001049!5.93e-68!57;UBERON:0005068!5.93e-68!57;UBERON:0006241!5.93e-68!57;UBERON:0007135!5.93e-68!57;UBERON:0000073!4.08e-66!94;UBERON:0001016!4.08e-66!94;UBERON:0000955!1.06e-65!69;UBERON:0006238!1.06e-65!69;UBERON:0002616!2.63e-65!59;UBERON:0000956!3.33e-63!25;UBERON:0000203!3.33e-63!25;UBERON:0003075!9.33e-57!86;UBERON:0007284!9.33e-57!86;UBERON:0002619!1.09e-54!22;UBERON:0002346!1.05e-53!90;UBERON:0001950!1.55e-49!20;UBERON:0000033!1.70e-43!123;UBERON:0000153!1.01e-42!129;UBERON:0007811!1.01e-42!129;UBERON:0004121!1.35e-37!169;UBERON:0000924!2.05e-36!173;UBERON:0006601!2.05e-36!173;UBERON:0007023!2.94e-28!115;UBERON:0002420!1.22e-24!9;UBERON:0007245!1.22e-24!9;UBERON:0010009!1.22e-24!9;UBERON:0010011!1.22e-24!9;UBERON:0000454!1.22e-24!9;UBERON:0009663!2.12e-19!7;UBERON:0002308!7.04e-19!9;UBERON:0000125!7.04e-19!9;UBERON:0001871!1.06e-16!7;UBERON:0000200!1.68e-16!6;UBERON:0000349!1.24e-14!5;UBERON:0000025!2.44e-14!194;UBERON:0001872!2.48e-14!5;UBERON:0002021!3.75e-14!5;UBERON:0000064!6.80e-14!219;UBERON:0000369!1.35e-12!4;UBERON:0002435!1.35e-12!4;UBERON:0000204!1.35e-12!4;UBERON:0010082!1.35e-12!4;UBERON:0000483!4.16e-11!309;UBERON:0000119!6.99e-11!312;UBERON:0000475!1.61e-10!365;UBERON:0004111!3.32e-10!241;UBERON:0005383!5.77e-10!3;UBERON:0005382!5.77e-10!3;UBERON:0000477!2.04e-09!286;UBERON:0002771!4.29e-09!3;UBERON:0000481!7.40e-08!347;UBERON:0001873!2.87e-07!2;UBERON:0010122!2.87e-07!2;UBERON:0001876!6.28e-07!2;UBERON:0001870!8.84e-07!2;UBERON:0001954!9.90e-07!2;UBERON:0003022!9.90e-07!2;UBERON:0002421!9.90e-07!2;UBERON:0002600!9.90e-07!2 | ||
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|short_description=p1@NR2E1 | |short_description=p1@NR2E1 | ||
}} | }} |
Latest revision as of 17:16, 19 September 2015
Short description: | p1@NR2E1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NR2E1_5end |
Coexpression cluster: | C4542_Astrocyte_eye_caudate_Neural_amygdala_brain_hippocampus |
Association with transcript: | 27bp_to_ENST00000368986_5end |
EntrezGene: | NR2E1 |
HGNC: | 7973 |
UniProt: | Q9Y466 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 8.63e-14 | 3 |
neuronal stem cell | 1.29e-08 | 8 |
neural cell | 8.56e-07 | 25 |