FFCP PHASE1:Hg19::chr3:2140565..2140621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152330 | |EntrezGene=152330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2174 | |HGNC=2174 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWV2,C9JGK9 | |UniProt=Q8IWV2,C9JGK9 | ||
|association_with_transcript=0bp_to_ENST00000418658,ENST00000455083,ENST00000490876_5end | |association_with_transcript=0bp_to_ENST00000418658,ENST00000455083,ENST00000490876_5end | ||
|cluster_id=chr3:2140565..2140621,+ | |||
|coexpression_cluster_id=C4320 | |coexpression_cluster_id=C4320 | ||
|description=CAGE_peak_1_at_CNTN4_5end | |description=CAGE_peak_1_at_CNTN4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.29e-08;82!UBERON:0006215;6.94e-07;3 | |ontology_enrichment_development_v019=UBERON:0006601;1.29e-08;82!UBERON:0006215;6.94e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-59!115;UBERON:0002346!8.68e-40!90;UBERON:0001049!2.16e-39!57;UBERON:0005068!2.16e-39!57;UBERON:0006241!2.16e-39!57;UBERON:0007135!2.16e-39!57;UBERON:0005743!1.09e-37!86;UBERON:0003075!3.79e-37!86;UBERON:0007284!3.79e-37!86;UBERON:0000073!4.25e-36!94;UBERON:0001016!4.25e-36!94;UBERON:0001017!3.46e-35!82;UBERON:0002616!2.64e-32!59;UBERON:0000955!5.95e-32!69;UBERON:0006238!5.95e-32!69;UBERON:0000924!3.28e-29!173;UBERON:0006601!3.28e-29!173;UBERON:0000153!7.46e-29!129;UBERON:0007811!7.46e-29!129;UBERON:0003080!2.25e-28!42;UBERON:0003056!4.19e-28!61;UBERON:0002780!7.39e-28!41;UBERON:0001890!7.39e-28!41;UBERON:0006240!7.39e-28!41;UBERON:0000033!3.63e-27!123;UBERON:0004121!4.88e-27!169;UBERON:0001893!4.53e-25!34;UBERON:0002020!1.08e-24!34;UBERON:0003528!1.08e-24!34;UBERON:0001869!2.61e-24!32;UBERON:0002791!5.39e-24!33;UBERON:0002619!1.34e-22!22;UBERON:0001950!2.03e-21!20;UBERON:0000956!6.58e-19!25;UBERON:0000203!6.58e-19!25;UBERON:0000062!3.90e-15!511;UBERON:0000922!6.11e-14!612;UBERON:0000064!1.81e-13!219;UBERON:0000481!3.16e-12!347;UBERON:0002050!3.34e-12!605;UBERON:0005423!3.34e-12!605;UBERON:0003076!6.08e-12!15;UBERON:0003057!6.08e-12!15;UBERON:0000468!8.67e-12!659;UBERON:0000923!1.05e-11!604;UBERON:0005291!1.05e-11!604;UBERON:0006598!1.05e-11!604;UBERON:0002532!1.05e-11!604;UBERON:0004733!8.92e-10!12;UBERON:0002028!8.92e-10!12;UBERON:0007277!8.92e-10!12;UBERON:0000483!1.49e-09!309;UBERON:0000467!2.07e-09!625;UBERON:0000475!2.19e-09!365;UBERON:0000480!2.57e-09!626;UBERON:0000119!3.38e-09!312;UBERON:0000477!7.27e-09!286;UBERON:0000025!8.51e-09!194;UBERON:0004732!9.47e-09!13;UBERON:0004111!1.15e-08!241;UBERON:0001871!1.68e-08!7;UBERON:0002680!4.16e-08!9;UBERON:0001895!4.16e-08!9;UBERON:0010092!4.16e-08!9;UBERON:0000200!1.33e-07!6;UBERON:0002420!1.36e-07!9;UBERON:0007245!1.36e-07!9;UBERON:0010009!1.36e-07!9;UBERON:0010011!1.36e-07!9;UBERON:0000454!1.36e-07!9;UBERON:0002308!3.19e-07!9;UBERON:0000125!3.19e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.12e-59!115;UBERON:0002346!8.68e-40!90;UBERON:0001049!2.16e-39!57;UBERON:0005068!2.16e-39!57;UBERON:0006241!2.16e-39!57;UBERON:0007135!2.16e-39!57;UBERON:0005743!1.09e-37!86;UBERON:0003075!3.79e-37!86;UBERON:0007284!3.79e-37!86;UBERON:0000073!4.25e-36!94;UBERON:0001016!4.25e-36!94;UBERON:0001017!3.46e-35!82;UBERON:0002616!2.64e-32!59;UBERON:0000955!5.95e-32!69;UBERON:0006238!5.95e-32!69;UBERON:0000924!3.28e-29!173;UBERON:0006601!3.28e-29!173;UBERON:0000153!7.46e-29!129;UBERON:0007811!7.46e-29!129;UBERON:0003080!2.25e-28!42;UBERON:0003056!4.19e-28!61;UBERON:0002780!7.39e-28!41;UBERON:0001890!7.39e-28!41;UBERON:0006240!7.39e-28!41;UBERON:0000033!3.63e-27!123;UBERON:0004121!4.88e-27!169;UBERON:0001893!4.53e-25!34;UBERON:0002020!1.08e-24!34;UBERON:0003528!1.08e-24!34;UBERON:0001869!2.61e-24!32;UBERON:0002791!5.39e-24!33;UBERON:0002619!1.34e-22!22;UBERON:0001950!2.03e-21!20;UBERON:0000956!6.58e-19!25;UBERON:0000203!6.58e-19!25;UBERON:0000062!3.90e-15!511;UBERON:0000922!6.11e-14!612;UBERON:0000064!1.81e-13!219;UBERON:0000481!3.16e-12!347;UBERON:0002050!3.34e-12!605;UBERON:0005423!3.34e-12!605;UBERON:0003076!6.08e-12!15;UBERON:0003057!6.08e-12!15;UBERON:0000468!8.67e-12!659;UBERON:0000923!1.05e-11!604;UBERON:0005291!1.05e-11!604;UBERON:0006598!1.05e-11!604;UBERON:0002532!1.05e-11!604;UBERON:0004733!8.92e-10!12;UBERON:0002028!8.92e-10!12;UBERON:0007277!8.92e-10!12;UBERON:0000483!1.49e-09!309;UBERON:0000467!2.07e-09!625;UBERON:0000475!2.19e-09!365;UBERON:0000480!2.57e-09!626;UBERON:0000119!3.38e-09!312;UBERON:0000477!7.27e-09!286;UBERON:0000025!8.51e-09!194;UBERON:0004732!9.47e-09!13;UBERON:0004111!1.15e-08!241;UBERON:0001871!1.68e-08!7;UBERON:0002680!4.16e-08!9;UBERON:0001895!4.16e-08!9;UBERON:0010092!4.16e-08!9;UBERON:0000200!1.33e-07!6;UBERON:0002420!1.36e-07!9;UBERON:0007245!1.36e-07!9;UBERON:0010009!1.36e-07!9;UBERON:0010011!1.36e-07!9;UBERON:0000454!1.36e-07!9;UBERON:0002308!3.19e-07!9;UBERON:0000125!3.19e-07!9 | ||
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| ||
|short_description=p1@CNTN4 | |short_description=p1@CNTN4 | ||
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Latest revision as of 18:40, 17 September 2015
Short description: | p1@CNTN4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNTN4_5end |
Coexpression cluster: | C4320_cerebellum_occipital_aorta_parietal_rectum_extraskeletal_brain |
Association with transcript: | 0bp_to_ENST00000418658, ENST00000455083, ENST00000490876_5end |
EntrezGene: | CNTN4 |
HGNC: | 2174 |
UniProt: | Q8IWV2C9JGK9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data