FFCP PHASE1:Hg19::chr3:159557711..159557774,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:159557711..159557774,+
|short_description=p1@SCHIP1
|description=CAGE_peak_1_at_SCHIP1_5end
|association_with_transcript=0bp_to_ENST00000461058,ENST0000049...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDG0,Q9P0W5 | |UniProt=F8WDG0,Q9P0W5 | ||
|association_with_transcript=0bp_to_ENST00000461058,ENST00000495954,uc003fcu.1_5end | |||
|cluster_id=chr3:159557711..159557774,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SCHIP1_5end | |||
|id=chr3:159557711..159557774,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.84e-08!25;CL:0000133!6.58e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.39e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.19e-10,25;CL:0000047,5.86e-08,8;CL:0000133,1.08e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.05e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;5.34e-31;34!UBERON:0003528;6.96e-31;34!UBERON:0002020;6.96e-31;34!UBERON:0002791;7.99e-31;32!UBERON:0001869;8.21e-31;32!UBERON:0002780;2.03e-30;41!UBERON:0001890;2.03e-30;41!UBERON:0000073;1.29e-29;53!UBERON:0002616;1.29e-29;53!UBERON:0000956;8.82e-27;25!UBERON:0000203;8.82e-27;25!UBERON:0002619;2.65e-24;22!UBERON:0001950;3.47e-22;20!UBERON:0001017;5.38e-22;75!UBERON:0000955;3.16e-21;68!UBERON:0001016;4.36e-21;83!UBERON:0004732;2.08e-12;13!UBERON:0004733;2.65e-11;12!UBERON:0002028;2.65e-11;12!UBERON:0002420;9.98e-11;9!UBERON:0007245;9.98e-11;9!UBERON:0010009;9.98e-11;9!UBERON:0010011;9.98e-11;9!UBERON:0000454;9.98e-11;9!UBERON:0007023;1.03e-10;114!UBERON:0000125;1.55e-10;9!UBERON:0002308;1.55e-10;9!UBERON:0011216;2.81e-10;132!UBERON:0009663;1.49e-08;7!UBERON:0002680;1.77e-08;9!UBERON:0001895;1.77e-08;9!UBERON:0001871;2.93e-08;6!UBERON:0000200;8.74e-08;6!UBERON:0001894;1.32e-07;7!UBERON:0002298;2.08e-07;6!UBERON:0000922;3.89e-07;49!UBERON:0007625;6.84e-07;11!UBERON:0000349;7.70e-07;5 | |||
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| ||
|short_description=p1@SCHIP1 | |||
}} | }} |
Latest revision as of 09:39, 16 September 2015
Short description: | p1@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCHIP1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000461058, ENST00000495954, uc003fcu.1_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | F8WDG0Q9P0W5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.19e-10 | 25 |
neuronal stem cell | 5.86e-08 | 8 |
neurectodermal cell | 1.08e-07 | 59 |