FFCP PHASE1:Hg19::chr4:145567297..145567355,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:145567297..145567355,+
|short_description=p1@HHIP
|description=CAGE_peak_1_at_HHIP_5end
|association_with_transcript=0bp_to_ENST00000434550_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64399 | |EntrezGene=64399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14866 | |HGNC=14866 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000434550_5end | |||
|cluster_id=chr4:145567297..145567355,+ | |||
|coexpression_cluster_id=C606 | |||
|description=CAGE_peak_1_at_HHIP_5end | |||
|id=chr4:145567297..145567355,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.10e-22!119;CL:0002139!2.15e-17!24;CL:0000359!8.99e-16!32;CL:0000115!1.73e-15!35;CL:0000071!7.30e-14!18;CL:0002546!7.30e-14!18;CL:0002078!1.28e-13!44;CL:0000183!1.99e-13!59;CL:0000680!4.01e-13!57;CL:0000056!4.01e-13!57;CL:0000355!4.01e-13!57;CL:0000055!9.66e-13!180;CL:0000187!4.39e-12!54;CL:0000192!5.55e-12!42;CL:0000514!5.55e-12!42;CL:0000393!1.13e-09!60;CL:0000211!1.13e-09!60;CL:0000213!1.89e-09!57;CL:0000215!1.89e-09!57;CL:1000413!6.29e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.31e-19;24!CL:0000359;2.30e-16;32!CL:0000071;2.86e-15;18!CL:0000115;5.39e-15;36!CL:0002078;8.07e-11;45!CL:0000192;2.73e-09;43!CL:1000413;1.17e-08;9!CL:0002494;1.90e-07;16!CL:0000213;3.88e-07;58!CL:0000215;3.88e-07;58!CL:0002539;7.64e-07;10!CL:0000187;8.69e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.03e-23,121;CL:0002139,3.37e-19,24;CL:0000115,1.19e-17,36;CL:0000359,2.16e-17,32;CL:0002078,1.73e-15,45;CL:0000071,2.90e-15,18;CL:0002546,2.90e-15,18;CL:0000680,1.09e-12,58;CL:0000056,1.09e-12,58;CL:0000355,1.09e-12,58;CL:0000192,2.95e-12,43;CL:0000514,2.95e-12,43;CL:0000187,1.41e-11,55;CL:0000213,6.86e-11,58;CL:0000215,6.86e-11,58;CL:0000393,8.30e-09,61;CL:0000211,8.30e-09,61;CL:1000413,1.18e-08,9;CL:0002494,1.87e-07,16;CL:0002539,7.59e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;2.86e-15;18!CL:0000514;2.73e-09;43!CL:0000355;5.30e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;2.34e-20;42!UBERON:0003509;2.34e-20;42!UBERON:0004572;2.34e-20;42!UBERON:0004573;1.61e-19;33!UBERON:0004571;1.61e-19;33!UBERON:0007500;1.67e-19;56!UBERON:0001981;1.67e-19;56!UBERON:0004537;1.67e-19;56!UBERON:0000055;7.74e-19;65!UBERON:0002049;1.20e-16;75!UBERON:0007798;1.20e-16;75!UBERON:0003914;6.26e-16;74!UBERON:0004638;2.86e-15;18!UBERON:0001986;2.86e-15;18!UBERON:0004852;2.86e-15;18!UBERON:0000947;7.49e-14;21!UBERON:0010191;7.49e-14;21!UBERON:0000487;2.01e-12;22!UBERON:0006914;2.33e-12;25!UBERON:0001893;2.47e-11;34!UBERON:0003528;4.09e-11;34!UBERON:0002020;4.09e-11;34!UBERON:0002791;6.33e-11;32!UBERON:0001869;6.56e-11;32!UBERON:0000073;1.40e-09;53!UBERON:0002616;1.40e-09;53!UBERON:0000025;1.42e-09;93!UBERON:0002780;1.70e-09;41!UBERON:0001890;1.70e-09;41!UBERON:0004535;2.32e-09;109!UBERON:0000956;3.70e-09;25!UBERON:0000203;3.70e-09;25!UBERON:0002619;5.85e-09;22!UBERON:0001009;8.77e-09;112!UBERON:0003915;1.17e-08;9!UBERON:0004700;1.17e-08;9!UBERON:0001917;1.17e-08;9!UBERON:0001950;3.30e-08;20!UBERON:0000490;3.87e-08;33!UBERON:0001017;7.79e-08;75!UBERON:0000955;4.38e-07;68!UBERON:0004237;7.64e-07;10!UBERON:0004695;7.64e-07;10!UBERON:0002111;7.64e-07;10!UBERON:0004178;7.64e-07;10 | |||
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| ||
|short_description=p1@HHIP | |||
}} | }} |
Latest revision as of 22:24, 15 September 2015
Short description: | p1@HHIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HHIP_5end |
Coexpression cluster: | C606_Endothelial_extraskeletal_Smooth_mesothelioma_Lymphatic_Fibroblast_lung |
Association with transcript: | 0bp_to_ENST00000434550_5end |
EntrezGene: | HHIP |
HGNC: | 14866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.03e-23 | 121 |
endothelial cell of vascular tree | 3.37e-19 | 24 |
endothelial cell | 1.19e-17 | 36 |
vascular associated smooth muscle cell | 2.16e-17 | 32 |
meso-epithelial cell | 1.73e-15 | 45 |
blood vessel endothelial cell | 2.90e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.90e-15 | 18 |
muscle precursor cell | 1.09e-12 | 58 |
myoblast | 1.09e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-12 | 58 |
smooth muscle cell | 2.95e-12 | 43 |
smooth muscle myoblast | 2.95e-12 | 43 |
muscle cell | 1.41e-11 | 55 |
lining cell | 6.86e-11 | 58 |
barrier cell | 6.86e-11 | 58 |
electrically responsive cell | 8.30e-09 | 61 |
electrically active cell | 8.30e-09 | 61 |
endothelial cell of artery | 1.18e-08 | 9 |
cardiocyte | 1.87e-07 | 16 |
aortic smooth muscle cell | 7.59e-07 | 10 |