FFCP PHASE1:Hg19::chr7:127672305..127672333,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:127672305..127672333,-
|short_description=p5@LRRC4
|description=CAGE_peak_5_at_LRRC4_5end
|association_with_transcript=-145bp_to_ENST00000476782_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64101 | |EntrezGene=64101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15586 | |HGNC=15586 | ||
|TSSclassifier=strong | |||
|UniProt=C9JA92 | |UniProt=C9JA92 | ||
|association_with_transcript=-145bp_to_ENST00000476782_5end | |||
|cluster_id=chr7:127672305..127672333,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_LRRC4_5end | |||
|id=chr7:127672305..127672333,- | |||
|ontology_enrichment_celltype=CL:0000766!2.20e-10!76;CL:0000094!4.87e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000775;4.54e-10;3!CL:0000094;1.45e-09;8!CL:0000771;3.05e-07;2!CL:0000081;8.23e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.56e-10,3;CL:0000094,1.45e-09,8;CL:0000771,3.06e-07,2;CL:0000081,8.26e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.56e-09;3!UBERON:0006601;6.31e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;7.60e-44;22!UBERON:0001950;1.52e-43;20!UBERON:0001893;1.18e-42;34!UBERON:0000956;5.63e-42;25!UBERON:0000203;5.63e-42;25!UBERON:0001869;7.22e-41;32!UBERON:0002791;7.19e-40;32!UBERON:0003528;3.15e-38;34!UBERON:0002020;3.15e-38;34!UBERON:0002780;2.14e-37;41!UBERON:0001890;2.14e-37;41!UBERON:0000073;1.28e-36;53!UBERON:0002616;1.28e-36;53!UBERON:0000955;5.22e-22;68!UBERON:0001017;1.36e-21;75!UBERON:0001016;8.89e-18;83!UBERON:0000200;2.51e-16;6!UBERON:0002021;3.03e-14;5!UBERON:0001872;1.84e-13;5!UBERON:0000178;2.27e-13;15!UBERON:0000179;2.27e-13;15!UBERON:0000463;2.27e-13;15!UBERON:0007023;1.52e-11;114!UBERON:0001871;3.83e-10;6!UBERON:0004733;8.63e-10;12!UBERON:0002028;8.63e-10;12!UBERON:0004732;5.89e-09;13!UBERON:0001870;7.13e-09;3!UBERON:0002680;2.98e-07;9!UBERON:0001895;2.98e-07;9!UBERON:0002420;3.26e-07;9!UBERON:0007245;3.26e-07;9!UBERON:0010009;3.26e-07;9!UBERON:0010011;3.26e-07;9!UBERON:0000454;3.26e-07;9!UBERON:0011216;5.33e-07;132!UBERON:0000125;6.44e-07;9!UBERON:0002308;6.44e-07;9!UBERON:0002298;9.51e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.88e-59,53;UBERON:0002616,2.88e-59,53;UBERON:0001049,5.09e-59,56;UBERON:0005068,5.09e-59,56;UBERON:0006241,5.09e-59,56;UBERON:0007135,5.09e-59,56;UBERON:0001017,1.58e-57,81;UBERON:0000955,1.24e-51,68;UBERON:0006238,1.24e-51,68;UBERON:0002780,9.95e-51,41;UBERON:0001890,9.95e-51,41;UBERON:0003080,9.95e-51,41;UBERON:0006240,9.95e-51,41;UBERON:0001016,1.14e-50,89;UBERON:0001893,1.58e-50,34;UBERON:0003528,1.97e-46,34;UBERON:0002020,1.97e-46,34;UBERON:0001869,3.27e-46,32;UBERON:0002791,7.63e-46,32;UBERON:0002619,7.17e-44,22;UBERON:0001950,1.55e-43,20;UBERON:0000956,4.35e-42,25;UBERON:0000203,4.35e-42,25;UBERON:0007023,1.30e-40,114;UBERON:0003075,3.71e-37,82;UBERON:0007284,3.71e-37,82;UBERON:0002346,5.85e-35,86;UBERON:0003056,1.46e-31,61;UBERON:0010371,1.75e-30,104;UBERON:0004121,2.43e-23,171;UBERON:0000924,2.43e-23,171;UBERON:0006601,2.43e-23,171;UBERON:0010314,6.79e-22,132;UBERON:0011216,4.81e-17,223;UBERON:0000200,2.71e-16,6;UBERON:0002021,2.66e-14,5;UBERON:0000178,1.61e-13,15;UBERON:0000179,1.61e-13,15;UBERON:0000463,1.61e-13,15;UBERON:0001872,1.76e-13,5;UBERON:0000025,7.12e-12,192;UBERON:0003076,4.44e-10,15;UBERON:0003057,4.44e-10,15;UBERON:0001871,4.84e-10,6;UBERON:0004733,6.89e-10,12;UBERON:0002028,6.89e-10,12;UBERON:0007277,6.89e-10,12;UBERON:0004732,4.79e-09,13;UBERON:0001870,5.85e-09,3;UBERON:0004111,1.29e-07,240;UBERON:0002680,2.64e-07,9;UBERON:0001895,2.64e-07,9;UBERON:0010092,2.64e-07,9;UBERON:0002420,2.75e-07,9;UBERON:0007245,2.75e-07,9;UBERON:0010009,2.75e-07,9;UBERON:0010011,2.75e-07,9;UBERON:0000454,2.75e-07,9;UBERON:0000923,4.56e-07,560;UBERON:0010316,4.56e-07,560;UBERON:0005291,4.56e-07,560;UBERON:0006598,4.56e-07,560;UBERON:0010317,4.56e-07,560;UBERON:0002532,4.56e-07,560;UBERON:0000125,4.70e-07,9;UBERON:0002308,4.70e-07,9;UBERON:0002050,6.59e-07,564;UBERON:0002298,7.98e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,1.71741592278634,0,0.376627918784408,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.802177789880567,0,2.68698569087909,0.32389366601898,3.09090681161024,1.45398238779565,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0,0.256160706529101,0.47296445977717,0,0,0,0.564727018627814,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0.316462387440884,0.211255286311942,0.425208599930087,0.419317291016752,0.336985893439485,0.150176892841506,0.803627933485401,1.14005097496499,0.59675003159727,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0.364295288292542,0,0.324547393654683,0,0.531831842075461,0.238490624305342,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0.112611480483322,1.53316637465883,0,0.183201743930407,17.1314542666882,19.3890132074163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.243947412259191,0,0.464775771478074,0.932949495138334,1.00928340350251,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0.144366447761074,0,0.380508304469197,0,0,0.738651018262192,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,1.01637849688985,0,2.31986643833309,2.34522771468088,3.82763250991898,16.478154526838,29.9161459204025,23.207268752418,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.524497659837696,0.902399225814824,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.618246069886334,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,3.55213326462519,3.82318603571188,8.54470780761244,1.19115887728894,1.64544909234478,1.94541993357815,2.70015718619057,4.75875105776562,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0.614481528616916,1.11838053946208,1.16794399198336,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,4.50142132513641,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,9.57932369387759,0,2.90799823828566,2.31920245404628,1.99613798001194,0,0,0,0.227586896570999,0,0,0,0,0,0,2.29133233388275,1.52581736317083,4.97606669690511,5.31985714116385,2.63262476584767,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,2.02203398942031,0,1.87411556580271,0,0,0,0,0,3.97894590119637,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0.176512253383001,0.451961481561065,0,0,3.54540457352921,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,1.9166753044879,0,0,0,0,0.458320848023367,0,0.599037001496973,0.429226048136571,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,3.81369537112412,0.321506296930038,0.275078873194468,0,0,0,4.13096985274568,0,0.472834243795189,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,0,0.775697738169303,1.71902382265497,0,0,0.854299300541557,0.157204305099666,1.65695622138878,1.48849806543585,0,0,0,0,0,0.306345576763462,0,0,1.77213635993397,2.07444650333337,3.505346059782,0.573409195690071,1.55300672151593,1.4903136705932,0,0,0,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,3.04168559533808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.218419276384028,0.169732529954025,0,0,0,0,0,0,0,0.3062454773532,2.89031512934068,2.8339315265117,3.35231104020018,3.69209455633359,3.27693205088234,3.8728061379962,2.26065903884592,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,3.64702956939331,1.56215619722769,1.44680757550829,4.6927699543491,2.18789923607288,0,0.992422356778588,0,0,0,1.3451348888753,0,0.227662191351298,0.266107110487916,0,0,1.22345519358297,3.68327531951955,0,0,0.313972371402056,0.628462359664008,0,0.913158720509496,0,0,0.357382720883282,0.316027223465453,0,0,0,0,0.3414369541879,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0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| ||
|short_description=p5@LRRC4 | |||
}} | }} |
Latest revision as of 02:57, 16 September 2015
Short description: | p5@LRRC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LRRC4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -145bp_to_ENST00000476782_5end |
EntrezGene: | LRRC4 |
HGNC: | 15586 |
UniProt: | C9JA92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.56e-10 | 3 |
granulocyte | 1.45e-09 | 8 |
eosinophil | 3.06e-07 | 2 |
blood cell | 8.26e-07 | 11 |