FFCP PHASE1:Hg19::chr16:56370717..56370743,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:56370717..56370743,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr16:56370717..56370743,+ | |||
|id=chr16:56370717..56370743,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.48e-18;3!UBERON:0006601;3.86e-13;82!UBERON:0010122;8.98e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.13e-83!57;UBERON:0005068!1.13e-83!57;UBERON:0006241!1.13e-83!57;UBERON:0007135!1.13e-83!57;UBERON:0002616!2.72e-70!59;UBERON:0001017!1.14e-69!82;UBERON:0005743!2.51e-68!86;UBERON:0002780!9.49e-66!41;UBERON:0001890!9.49e-66!41;UBERON:0006240!9.49e-66!41;UBERON:0000073!3.55e-65!94;UBERON:0001016!3.55e-65!94;UBERON:0003080!5.96e-64!42;UBERON:0000955!2.75e-63!69;UBERON:0006238!2.75e-63!69;UBERON:0007023!1.49e-58!115;UBERON:0002020!5.15e-56!34;UBERON:0003528!5.15e-56!34;UBERON:0003075!7.56e-56!86;UBERON:0007284!7.56e-56!86;UBERON:0001893!1.34e-55!34;UBERON:0002791!1.52e-53!33;UBERON:0002346!9.80e-53!90;UBERON:0001869!1.21e-51!32;UBERON:0003056!3.32e-43!61;UBERON:0002619!3.24e-42!22;UBERON:0001950!8.18e-38!20;UBERON:0000956!1.42e-36!25;UBERON:0000203!1.42e-36!25;UBERON:0004121!8.35e-34!169;UBERON:0000033!4.51e-33!123;UBERON:0000924!1.17e-32!173;UBERON:0006601!1.17e-32!173;UBERON:0000153!2.62e-32!129;UBERON:0007811!2.62e-32!129;UBERON:0002420!2.12e-21!9;UBERON:0007245!2.12e-21!9;UBERON:0010009!2.12e-21!9;UBERON:0010011!2.12e-21!9;UBERON:0000454!2.12e-21!9;UBERON:0002308!3.39e-21!9;UBERON:0000125!3.39e-21!9;UBERON:0003076!8.25e-20!15;UBERON:0003057!8.25e-20!15;UBERON:0000025!1.13e-19!194;UBERON:0009663!6.26e-17!7;UBERON:0004111!1.89e-15!241;UBERON:0001871!6.82e-15!7;UBERON:0004733!1.19e-14!12;UBERON:0002028!1.19e-14!12;UBERON:0007277!1.19e-14!12;UBERON:0000200!1.48e-14!6;UBERON:0002298!1.37e-13!8;UBERON:0004732!2.27e-13!13;UBERON:0000349!1.39e-12!5;UBERON:0001872!2.72e-12!5;UBERON:0000477!3.70e-12!286;UBERON:0001894!2.95e-11!7;UBERON:0006222!2.95e-11!7;UBERON:0000483!8.19e-11!309;UBERON:0000119!1.43e-10!312;UBERON:0000369!1.64e-10!4;UBERON:0002435!1.64e-10!4;UBERON:0000204!1.64e-10!4;UBERON:0010082!1.64e-10!4;UBERON:0000064!1.30e-09!219;UBERON:0000475!1.33e-09!365;UBERON:0002680!2.14e-09!9;UBERON:0001895!2.14e-09!9;UBERON:0010092!2.14e-09!9;UBERON:0002771!1.19e-08!3;UBERON:0005383!1.84e-08!3;UBERON:0005382!1.84e-08!3;UBERON:0002021!3.60e-08!5;UBERON:0006331!5.21e-08!3;UBERON:0000988!5.72e-08!3;UBERON:0001896!2.34e-07!3;UBERON:0005290!2.34e-07!3;UBERON:0010096!2.34e-07!3;UBERON:0000062!4.56e-07!511;UBERON:0002240!5.24e-07!3;UBERON:0006947!6.35e-07!3;UBERON:0004054!6.35e-07!3;UBERON:0000481!7.87e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.68e-74;34!UBERON:0002020;6.68e-74;34!UBERON:0002791;1.77e-72;32!UBERON:0001893;7.83e-67;34!UBERON:0001869;8.90e-67;32!UBERON:0002780;4.07e-54;41!UBERON:0001890;4.07e-54;41!UBERON:0002619;6.56e-54;22!UBERON:0002420;1.38e-50;9!UBERON:0007245;1.38e-50;9!UBERON:0010009;1.38e-50;9!UBERON:0010011;1.38e-50;9!UBERON:0000454;1.38e-50;9!UBERON:0000125;4.26e-50;9!UBERON:0002308;4.26e-50;9!UBERON:0000956;2.51e-47;25!UBERON:0000203;2.51e-47;25!UBERON:0000073;3.96e-45;53!UBERON:0002616;3.96e-45;53!UBERON:0001950;1.89e-44;20!UBERON:0009663;1.20e-39;7!UBERON:0000955;3.90e-35;68!UBERON:0001017;8.31e-31;75!UBERON:0001871;1.75e-29;6!UBERON:0000349;1.20e-28;5!UBERON:0000369;1.10e-23;4!UBERON:0002435;1.10e-23;4!UBERON:0000204;1.10e-23;4!UBERON:0001016;7.29e-23;83!UBERON:0005383;1.75e-18;3!UBERON:0005382;1.75e-18;3!UBERON:0002680;1.37e-15;9!UBERON:0001895;1.37e-15;9!UBERON:0002771;3.69e-13;2!UBERON:0007023;6.39e-13;114!UBERON:0001873;8.98e-13;2!UBERON:0001876;1.10e-12;2!UBERON:0001954;1.56e-12;2!UBERON:0001875;1.56e-12;2!UBERON:0003022;1.56e-12;2!UBERON:0002421;1.56e-12;2!UBERON:0006514;1.56e-12;2!UBERON:0002600;1.56e-12;2!UBERON:0002148;3.41e-12;2!UBERON:0006331;3.41e-12;2!UBERON:0009662;3.41e-12;2!UBERON:0004733;1.20e-11;12!UBERON:0002028;1.20e-11;12!UBERON:0011216;1.79e-11;132!UBERON:0001872;2.68e-11;5!UBERON:0002021;4.58e-11;5!UBERON:0004732;9.83e-11;13!UBERON:0000200;1.11e-09;6!UBERON:0002037;3.92e-09;6!UBERON:0000988;2.03e-08;3!UBERON:0001874;1.97e-07;1!UBERON:0003112;1.97e-07;1!UBERON:0011158;1.97e-07;1!UBERON:0003128;1.97e-07;1!UBERON:0001703;1.97e-07;1!UBERON:0002241;1.97e-07;1!UBERON:0001882;6.30e-07;1!UBERON:0002038;6.30e-07;1!UBERON:0009661;6.30e-07;1!UBERON:0002950;6.30e-07;1!UBERON:0005403;6.30e-07;1!UBERON:0001891;6.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.15e-90,34;UBERON:0002020,5.15e-90,34;UBERON:0000073,4.85e-84,53;UBERON:0002616,4.85e-84,53;UBERON:0002791,3.08e-80,32;UBERON:0001049,2.49e-79,56;UBERON:0005068,2.49e-79,56;UBERON:0006241,2.49e-79,56;UBERON:0007135,2.49e-79,56;UBERON:0001893,2.16e-75,34;UBERON:0002780,4.11e-74,41;UBERON:0001890,4.11e-74,41;UBERON:0003080,4.11e-74,41;UBERON:0006240,4.11e-74,41;UBERON:0000955,3.59e-73,68;UBERON:0006238,3.59e-73,68;UBERON:0001869,3.97e-73,32;UBERON:0001017,3.31e-65,81;UBERON:0001016,2.87e-58,89;UBERON:0002619,7.30e-54,22;UBERON:0003075,9.42e-53,82;UBERON:0007284,9.42e-53,82;UBERON:0002420,2.96e-50,9;UBERON:0007245,2.96e-50,9;UBERON:0010009,2.96e-50,9;UBERON:0010011,2.96e-50,9;UBERON:0000454,2.96e-50,9;UBERON:0002346,4.52e-50,86;UBERON:0000125,9.38e-50,9;UBERON:0002308,9.38e-50,9;UBERON:0003056,1.29e-48,61;UBERON:0000956,2.76e-47,25;UBERON:0000203,2.76e-47,25;UBERON:0001950,2.05e-44,20;UBERON:0010371,1.29e-43,104;UBERON:0007023,6.97e-40,114;UBERON:0009663,3.15e-39,7;UBERON:0010314,2.31e-33,132;UBERON:0004121,3.98e-30,171;UBERON:0000924,3.98e-30,171;UBERON:0006601,3.98e-30,171;UBERON:0001871,2.68e-29,6;UBERON:0000349,1.56e-28,5;UBERON:0011216,1.83e-23,223;UBERON:0000369,1.92e-23,4;UBERON:0002435,1.92e-23,4;UBERON:0000204,1.92e-23,4;UBERON:0010082,1.92e-23,4;UBERON:0000025,1.85e-19,192;UBERON:0005383,1.98e-18,3;UBERON:0005382,1.98e-18,3;UBERON:0002680,9.75e-16,9;UBERON:0001895,9.75e-16,9;UBERON:0010092,9.75e-16,9;UBERON:0004111,1.95e-14,240;UBERON:0002771,3.28e-13,2;UBERON:0001876,9.00e-13,2;UBERON:0001873,1.01e-12,2;UBERON:0010122,1.01e-12,2;UBERON:0001954,1.62e-12,2;UBERON:0001875,1.62e-12,2;UBERON:0003022,1.62e-12,2;UBERON:0002421,1.62e-12,2;UBERON:0006514,1.62e-12,2;UBERON:0002600,1.62e-12,2;UBERON:0002148,2.88e-12,2;UBERON:0006331,2.88e-12,2;UBERON:0009662,2.88e-12,2;UBERON:0004733,9.37e-12,12;UBERON:0002028,9.37e-12,12;UBERON:0007277,9.37e-12,12;UBERON:0001872,2.51e-11,5;UBERON:0002021,3.80e-11,5;UBERON:0000483,4.46e-11,306;UBERON:0000119,6.52e-11,309;UBERON:0004732,7.81e-11,13;UBERON:0000200,1.08e-09,6;UBERON:0003076,2.33e-09,15;UBERON:0003057,2.33e-09,15;UBERON:0002037,3.13e-09,6;UBERON:0006215,3.13e-09,6;UBERON:0000988,1.81e-08,3;UBERON:0003112,1.86e-07,1;UBERON:0011158,1.86e-07,1;UBERON:0003128,1.86e-07,1;UBERON:0001703,1.86e-07,1;UBERON:0002241,1.86e-07,1;UBERON:0004761,1.86e-07,1;UBERON:0009617,1.86e-07,1;UBERON:0001874,1.98e-07,1;UBERON:0002038,9.18e-07,1;UBERON:0009661,9.18e-07,1;UBERON:0002950,9.18e-07,1;UBERON:0001891,9.18e-07,1;UBERON:0009616,9.18e-07,1;UBERON:0010286,9.18e-07,1;UBERON:0001882,9.73e-07,1;UBERON:0005403,9.73e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.837581326671744,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,1.54736358051564,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.20598527610407,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,5.31444831488303,1.4471572635049,1.52581736317083,1.87984741883082,2.36438095162838,2.4132393686937,0,0,0,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.404406797884062,0,0.937057782901357,0,0,0,0.394584402849391,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.886351143382302,0,0,0.213452994739353,0.19980960958213,0,0,0.343189995723929,0,0,0,0,0,0,0,2.40168115483916,1.50595916781192,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,2.04305109167363,0,0,0.415440338029185,0,0,0.728994679896296,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,1.68067843270016,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,11.1043901060786,3.254964198369,0.573409195690071,0.554645257684261,0.620964029413834,0,0,0.151649117541648,0.285465333544967,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62691028688288,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,1.09189682663981,2.8339315265117,2.23487402680012,1.64093091392604,0,0.553258019713743,3.55246420390072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,5.46754669029693,3.10030194751776,0.507326481551255,1.64092442705466,0,0.496211178389294,0,0,1.07140367175657,0.336283722218824,0,0.227662191351298,0,0,0,0.951576261675644,0.72350050919134,0,0,0,3.45654297815204,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,1.14671666521161,0,1.01987235286372,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.827463966895162,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr16:56370717..56370743,+ | |||
}} |
Latest revision as of 10:01, 25 July 2015
Short description: | p@chr16:56370717..56370743, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:56370717..56370743, + |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data