FFCP PHASE1:Hg19::chr1:145525015..145525048,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8515 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6135 | |||
|TSSclassifier=strong | |||
|UniProt=F5GY13,B2RTV5 | |||
|association_with_transcript=0bp_to_ENST00000538811,ENST00000539363_5end | |||
|cluster_id=chr1:145525015..145525048,+ | |||
|description=CAGE_peak_1_at_ITGA10_5end | |||
|id=chr1:145525015..145525048,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.54e-27!180;CL:0000680!1.11e-14!57;CL:0000056!1.11e-14!57;CL:0000355!1.11e-14!57;CL:0000183!3.74e-13!59;CL:0000187!3.90e-13!54;CL:0000222!4.03e-13!119;CL:0000057!1.29e-10!75;CL:0000393!2.15e-10!60;CL:0000211!2.15e-10!60;CL:0002139!3.37e-10!24;CL:0000115!8.96e-10!35;CL:0000071!1.49e-09!18;CL:0002546!1.49e-09!18;CL:0000192!5.64e-08!42;CL:0000514!5.64e-08!42;CL:0000188!3.66e-07!9;CL:0000359!3.80e-07!32;CL:0002078!4.17e-07!44;CL:1000413!4.91e-07!9;CL:0000327!7.09e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.99e-11;18!CL:0002139;2.35e-11;24!CL:0000115;3.65e-09;36!CL:0000188;2.83e-08;9!CL:1000413;3.81e-08;9!CL:0000187;1.86e-07;55!CL:0000680;8.50e-07;7!CL:0000062;8.70e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,9.75e-14,58;CL:0000056,9.75e-14,58;CL:0000355,9.75e-14,58;CL:0000222,2.80e-13,121;CL:0000187,4.86e-12,55;CL:0000071,2.47e-11,18;CL:0002546,2.47e-11,18;CL:0002139,2.55e-11,24;CL:0000115,3.65e-10,36;CL:0000393,1.49e-09,61;CL:0000211,1.49e-09,61;CL:0000188,2.81e-08,9;CL:1000413,4.00e-08,9;CL:0000057,4.23e-08,76;CL:0002078,4.27e-07,45;CL:0000192,5.95e-07,43;CL:0000514,5.95e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002546;1.99e-11;18!CL:0000355;1.46e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.59e-12;31!UBERON:0001015;3.59e-12;31!UBERON:0000383;3.59e-12;31!UBERON:0004638;1.99e-11;18!UBERON:0001986;1.99e-11;18!UBERON:0004852;1.99e-11;18!UBERON:0001134;2.66e-10;16!UBERON:0002036;2.66e-10;16!UBERON:0007500;1.07e-09;56!UBERON:0001981;1.07e-09;56!UBERON:0004537;1.07e-09;56!UBERON:0001637;3.85e-09;42!UBERON:0003509;3.85e-09;42!UBERON:0004572;3.85e-09;42!UBERON:0000055;6.29e-09;65!UBERON:0002204;6.83e-09;70!UBERON:0002049;1.28e-08;75!UBERON:0007798;1.28e-08;75!UBERON:0000487;3.65e-08;22!UBERON:0003915;3.81e-08;9!UBERON:0004700;3.81e-08;9!UBERON:0001917;3.81e-08;9!UBERON:0000947;6.28e-08;21!UBERON:0010191;6.28e-08;21!UBERON:0004573;9.69e-08;33!UBERON:0004571;9.69e-08;33!UBERON:0006914;1.70e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.86e-21,78;UBERON:0007798,1.86e-21,78;UBERON:0000119,1.91e-20,309;UBERON:0000483,6.26e-19,306;UBERON:0003077,2.12e-18,72;UBERON:0007285,2.12e-18,72;UBERON:0000055,2.35e-18,68;UBERON:0002329,3.67e-18,71;UBERON:0003059,3.67e-18,71;UBERON:0007282,3.67e-18,71;UBERON:0004290,3.67e-18,71;UBERON:0009618,3.67e-18,71;UBERON:0007524,7.16e-18,73;UBERON:0007500,2.68e-17,59;UBERON:0001981,2.68e-17,59;UBERON:0004537,2.68e-17,59;UBERON:0006965,2.68e-17,59;UBERON:0007503,9.82e-17,78;UBERON:0001009,7.40e-16,112;UBERON:0004535,1.15e-15,109;UBERON:0000025,9.61e-15,192;UBERON:0002385,9.90e-15,64;UBERON:0001015,9.90e-15,64;UBERON:0000383,9.90e-15,64;UBERON:0004872,9.96e-15,83;UBERON:0001134,2.08e-14,62;UBERON:0002036,2.08e-14,62;UBERON:0003082,2.08e-14,62;UBERON:0010314,7.42e-14,132;UBERON:0000486,1.28e-13,83;UBERON:0004111,1.85e-13,240;UBERON:0000490,8.70e-13,148;UBERON:0004638,2.47e-11,18;UBERON:0001986,2.47e-11,18;UBERON:0004852,2.47e-11,18;UBERON:0001637,2.53e-10,42;UBERON:0003509,2.53e-10,42;UBERON:0004572,2.53e-10,42;UBERON:0003075,4.35e-10,82;UBERON:0007284,4.35e-10,82;UBERON:0003104,7.34e-10,160;UBERON:0009142,7.34e-10,160;UBERON:0000479,1.13e-09,773;UBERON:0005256,1.55e-09,122;UBERON:0007023,2.39e-09,114;UBERON:0001049,3.40e-09,56;UBERON:0005068,3.40e-09,56;UBERON:0006241,3.40e-09,56;UBERON:0007135,3.40e-09,56;UBERON:0002346,6.43e-09,86;UBERON:0003914,8.84e-09,117;UBERON:0000955,1.13e-08,68;UBERON:0006238,1.13e-08,68;UBERON:0001017,3.18e-08,81;UBERON:0001016,3.41e-08,89;UBERON:0010371,3.48e-08,104;UBERON:0003915,4.00e-08,9;UBERON:0004700,4.00e-08,9;UBERON:0001917,4.00e-08,9;UBERON:0000487,4.29e-08,22;UBERON:0000073,4.62e-08,53;UBERON:0002616,4.62e-08,53;UBERON:0004573,6.72e-08,33;UBERON:0004571,6.72e-08,33;UBERON:0000947,7.41e-08,21;UBERON:0010191,7.41e-08,21;UBERON:0006914,2.02e-07,25;UBERON:0000923,2.90e-07,560;UBERON:0010316,2.90e-07,560;UBERON:0005291,2.90e-07,560;UBERON:0006598,2.90e-07,560;UBERON:0010317,2.90e-07,560;UBERON:0002532,2.90e-07,560;UBERON:0004121,2.95e-07,171;UBERON:0000924,2.95e-07,171;UBERON:0006601,2.95e-07,171;UBERON:0002050,7.34e-07,564 | |||
|phase1_expression=8.17552706717505,6.42301571672949,2.53717927372748,5.00366491765652,1.78784437770915,1.74467704820074,0,2.52687949370732,0,0,0.697801167972428,0.218441372130172,0.527533956456907,42.6993917712161,37.7793008329824,3.36162573225888,0.602694528023977,2.92124036154949,2.43966399395253,2.58554221961255,10.4040352534569,3.76145665773705,0.286235987131057,0.821246550437305,3.13856598987007,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,0.895037932904712,3.97583067623023,4.51204119572301,4.49024208778554,17.4962908351242,51.5832962520794,0.472674085820339,0.443458794925128,2.10803485663503,2.03017567021455,0,0,0.324547393654683,0,0,0,0,0,21.6651024029709,16.3444573070164,42.0040006945189,18.0898541415683,23.0724689915448,9.90424950984243,13.3756778583559,2.84258435086262,1.06729878806013,1.67360306382335,5.23678112241891,0,6.58967555380058,3.30896772311282,26.7346842800981,9.46577119811245,10.3283511408038,8.78369547769913,3.06633274931766,8.54339093611316,8.24407847686833,0,0,0,2.48485975847659,5.06522046658319,0.264818361626438,7.17091551872034,2.12801029319014,3.92474320099615,0,0.49333509683432,9.33633106199299,9.56445771694785,13.5673379584171,96.4146814098213,134.24899040384,7.73260725051529,22.4755255317831,8.55707732316674,17.1865982634571,19.0243887802899,17.1585321030219,19.5226621316125,17.9655670704306,21.1275025776241,18.7019663928135,0,0.247266929278557,8.19145225744224,5.03032699271367,21.0420142442583,16.6407631429712,2.21651292387346,0.877955241761676,0.919463387397059,3.30523729594513,5.10444824220095,0.538168907066586,0.427114777637135,0,0,0,0,0,3.03797398034279,0.68205903612839,0.504867548488229,0,0,3.90510551768276,0.201504196455281,0.67824236924195,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,1.92972281457866,2.76269842704961,4.17931135228781,2.88751792667834,0,0,0,0,0,0.237270619111097,0,0,0,1.4763109092493,9.81692416624121,2.4694440679884,10.2906097969879,0,0,2.95394953340702,0,0,0.514703430895577,0,0,0.100528972411631,0.370353780634118,1.62904152655162,18.7188261350324,1.44331342025273,0.115930404975077,1.76113041353732,2.45422961193825,2.77791307545966,0.761016608938393,0,0,0,0,0,0,0,0,3.94057499892532,2.90633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,39.8065349426031,15.6945624779981,38.6492766276407,0.129271715757778,10.7296933755565,5.917119267892,0.26593811658487,0,27.2639816717871,18.4403871630262,20.2480856052236,2.7165818795048,5.96883765930587,7.40916303102692,5.86325131728723,1.42156779497018,2.37585561880029,0,0,0,0,0,0,4.0736225433569,4.59447743336456,9.98458335285029,8.97644101338991,12.7395319981238,19.3385840299087,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,20.4894791170964,40.5138122058338,67.5449909012342,0,0,0.157702415033935,0,34.0069092692322,20.4666753650386,31.0419213877515,19.2625423575277,12.3527342922941,0.173767228936166,102.404005353013,70.6875453050363,0,0,0,0.303127571446259,0,1.20956117331872,1.73675465473144,7.51963669111506,2.24528075546459,0.128139149255701,2.55853624533352,0.321707842287215,1.48418066444991,0.616838775210622,2.66342587969691,2.7101961484557,0.519254429183621,2.20799719073923,0,0,0,0,0.182091168006717,0,0,0,0,0,0,2.27466768141793,0.340187410553031,1.51141141271498,1.54227252690289,0,0,0,0,0.447749509444357,0,0,0,0.328014645699706,0,1.33953315142039,21.2441158378557,28.8783249722058,0,0,0,10.0537547023807,14.0184241574326,16.1178858462436,22.329524742494,48.1242697009866,42.1998579290405,15.3407929348982,8.90320356467373,0,0,0,0,0.464845549297286,4.40737285562896,4.8792608911242,1.54016790088044,2.12922412126809,3.47973196830029,2.22389062924704,0.143124886741991,93.7839090786362,12.3387975640303,1.14378116354295,12.7948895655667,2.1396949401696,5.72765846266686,0.78494864019923,5.75591864266607,2.47083326762449,3.29874726567922,3.23491970517306,1.58510321173008,0.842516912477962,0.975267478179181,3.1682753652067,1.05650146756755,0,0,10.1707304958219,0.551365343546124,3.3171948762061,2.63070531152258,14.4693883566672,13.7737897929793,0,2.16876448669825,7.60578126837052,4.87598597493775,5.60019533774791,0,0,8.02209014131124,0.987884678879706,4.9331512589543,6.99869440489966,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,1.17206543417515,0,0,0.852408440419239,0,0,0,2.98244294329889,1.40669416410513,0,0,0,54.394700792542,0.276283915531148,0,0,0.123084805461069,0.311039587661807,0,0,0,3.64980600856654,0,22.2273980289274,1.93866549219044,1.57705766875147,0,0,0,2.89999830173917,0,0,0,0,0,0,6.20018970069687,0.844175070377856,0,3.09621927807429,1.77328571372128,4.16832254592548,0,0,2.5393585306253,0.227884111694002,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5652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| |||
|short_description=p1@ITGA10 | |||
}} |
Latest revision as of 18:33, 16 September 2015
Short description: | p1@ITGA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITGA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538811, ENST00000539363_5end |
EntrezGene: | ITGA10 |
HGNC: | 6135 |
UniProt: | F5GY13B2RTV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 9.75e-14 | 58 |
myoblast | 9.75e-14 | 58 |
multi-potent skeletal muscle stem cell | 9.75e-14 | 58 |
mesodermal cell | 2.80e-13 | 121 |
muscle cell | 4.86e-12 | 55 |
blood vessel endothelial cell | 2.47e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.47e-11 | 18 |
endothelial cell of vascular tree | 2.55e-11 | 24 |
endothelial cell | 3.65e-10 | 36 |
electrically responsive cell | 1.49e-09 | 61 |
electrically active cell | 1.49e-09 | 61 |
cell of skeletal muscle | 2.81e-08 | 9 |
endothelial cell of artery | 4.00e-08 | 9 |
fibroblast | 4.23e-08 | 76 |
meso-epithelial cell | 4.27e-07 | 45 |
smooth muscle cell | 5.95e-07 | 43 |
smooth muscle myoblast | 5.95e-07 | 43 |