FFCP PHASE1:Hg19::chr1:201857992..201858055,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149345 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27139 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001gxa.2_5end | |||
|cluster_id=chr1:201857992..201858055,+ | |||
|coexpression_cluster_id=C1060 | |||
|description=CAGE_peak_1_at_SHISA4_5end | |||
|id=chr1:201857992..201858055,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.55e-20!180;CL:0000222!1.47e-15!119;CL:0000183!1.34e-13!59;CL:0000192!7.00e-12!42;CL:0000514!7.00e-12!42;CL:0000187!1.01e-11!54;CL:0000680!2.17e-11!57;CL:0000056!2.17e-11!57;CL:0000355!2.17e-11!57;CL:0000393!4.61e-10!60;CL:0000211!4.61e-10!60;CL:0000359!4.34e-09!32;CL:0000220!1.71e-08!246;CL:0002321!3.57e-08!248;CL:0000057!4.99e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0000192;6.67e-09;43!CL:0000359;1.13e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.51e-16,121;CL:0000192,4.10e-12,43;CL:0000514,4.10e-12,43;CL:0000187,5.83e-12,55;CL:0000680,1.25e-11,58;CL:0000056,1.25e-11,58;CL:0000355,1.25e-11,58;CL:0000393,2.72e-10,61;CL:0000211,2.72e-10,61;CL:0000359,3.94e-09,32;CL:0000057,2.33e-08,76;CL:0002321,3.97e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000514;6.67e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.90e-25!365;UBERON:0000483!3.10e-23!309;UBERON:0000119!4.57e-23!312;UBERON:0004111!1.99e-22!241;UBERON:0000477!8.37e-22!286;UBERON:0000468!8.49e-22!659;UBERON:0000025!1.72e-21!194;UBERON:0000467!3.81e-18!625;UBERON:0000480!9.40e-18!626;UBERON:0000481!1.35e-16!347;UBERON:0007023!1.98e-16!115;UBERON:0002050!9.79e-16!605;UBERON:0005423!9.79e-16!605;UBERON:0000923!9.95e-16!604;UBERON:0005291!9.95e-16!604;UBERON:0006598!9.95e-16!604;UBERON:0002532!9.95e-16!604;UBERON:0001009!1.73e-15!113;UBERON:0003075!2.31e-15!86;UBERON:0007284!2.31e-15!86;UBERON:0005743!3.54e-15!86;UBERON:0000922!3.77e-15!612;UBERON:0004535!4.07e-15!110;UBERON:0000033!4.32e-15!123;UBERON:0001049!5.37e-15!57;UBERON:0005068!5.37e-15!57;UBERON:0006241!5.37e-15!57;UBERON:0007135!5.37e-15!57;UBERON:0000955!7.48e-15!69;UBERON:0006238!7.48e-15!69;UBERON:0002616!8.61e-15!59;UBERON:0001017!1.62e-14!82;UBERON:0000073!3.85e-14!94;UBERON:0001016!3.85e-14!94;UBERON:0002346!1.47e-13!90;UBERON:0004121!1.48e-13!169;UBERON:0005256!1.83e-13!143;UBERON:0002049!3.76e-13!79;UBERON:0007798!3.76e-13!79;UBERON:0000153!5.02e-13!129;UBERON:0007811!5.02e-13!129;UBERON:0000914!5.20e-13!83;UBERON:0002329!5.20e-13!83;UBERON:0003077!5.20e-13!83;UBERON:0003059!5.20e-13!83;UBERON:0007282!5.20e-13!83;UBERON:0009618!5.20e-13!83;UBERON:0007285!5.20e-13!83;UBERON:0000924!1.96e-12!173;UBERON:0006601!1.96e-12!173;UBERON:0004872!2.93e-12!84;UBERON:0003056!4.00e-12!61;UBERON:0002780!6.35e-12!41;UBERON:0001890!6.35e-12!41;UBERON:0006240!6.35e-12!41;UBERON:0003080!1.01e-11!42;UBERON:0003914!1.65e-11!118;UBERON:0001134!1.97e-11!61;UBERON:0002036!1.97e-11!61;UBERON:0003082!1.97e-11!61;UBERON:0001893!1.99e-11!34;UBERON:0000055!2.10e-11!69;UBERON:0000486!2.62e-11!82;UBERON:0004290!2.84e-11!70;UBERON:0002385!6.34e-11!63;UBERON:0001015!6.34e-11!63;UBERON:0000383!6.34e-11!63;UBERON:0001981!6.84e-11!60;UBERON:0007500!6.84e-11!60;UBERON:0004537!6.84e-11!60;UBERON:0006965!6.84e-11!60;UBERON:0002791!7.58e-11!33;UBERON:0002020!7.88e-11!34;UBERON:0003528!7.88e-11!34;UBERON:0001869!1.04e-10!32;UBERON:0002100!2.60e-10!216;UBERON:0000064!4.13e-10!219;UBERON:0001637!3.84e-09!42;UBERON:0003509!3.84e-09!42;UBERON:0004572!3.84e-09!42;UBERON:0002619!1.98e-08!22;UBERON:0000490!2.07e-08!138;UBERON:0000956!2.62e-08!25;UBERON:0000203!2.62e-08!25;UBERON:0001950!8.94e-08!20;UBERON:0004573!1.29e-07!33;UBERON:0004571!1.29e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.90e-10;34!UBERON:0001869;9.52e-10;32!UBERON:0003528;1.62e-09;34!UBERON:0002020;1.62e-09;34!UBERON:0002791;1.99e-09;32!UBERON:0002780;1.00e-08;41!UBERON:0001890;1.00e-08;41!UBERON:0000073;1.40e-08;53!UBERON:0002616;1.40e-08;53!UBERON:0002619;1.74e-08;22!UBERON:0000956;2.35e-08;25!UBERON:0000203;2.35e-08;25!UBERON:0001950;7.76e-08;20!UBERON:0001017;2.15e-07;75!UBERON:0000955;2.29e-07;68!UBERON:0004573;5.76e-07;33!UBERON:0004571;5.76e-07;33 | |||
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| |||
|short_description=p1@SHISA4 | |||
}} |
Latest revision as of 19:16, 19 September 2015
Short description: | p1@SHISA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHISA4_5end |
Coexpression cluster: | C1060_Mesenchymal_Pericytes_Fibroblast_occipital_Renal_temporal_Nucleus |
Association with transcript: | 0bp_to_uc001gxa.2_5end |
EntrezGene: | SHISA4 |
HGNC: | 27139 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.51e-16 | 121 |
smooth muscle cell | 4.10e-12 | 43 |
smooth muscle myoblast | 4.10e-12 | 43 |
muscle cell | 5.83e-12 | 55 |
muscle precursor cell | 1.25e-11 | 58 |
myoblast | 1.25e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.25e-11 | 58 |
electrically responsive cell | 2.72e-10 | 61 |
electrically active cell | 2.72e-10 | 61 |
vascular associated smooth muscle cell | 3.94e-09 | 32 |
fibroblast | 2.33e-08 | 76 |
embryonic cell | 3.97e-08 | 250 |