FFCP PHASE1:Hg19::chr20:5903160..5903179,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:5903160..5903179,+ | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903160..5903179,+ | |||
|id=chr20:5903160..5903179,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.27e-32;3!UBERON:0010227;1.32e-11;1!UBERON:0006601;1.33e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.73e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.49e-48!57;UBERON:0005068!1.49e-48!57;UBERON:0006241!1.49e-48!57;UBERON:0007135!1.49e-48!57;UBERON:0002616!1.40e-46!59;UBERON:0002780!1.42e-43!41;UBERON:0001890!1.42e-43!41;UBERON:0006240!1.42e-43!41;UBERON:0000955!1.69e-42!69;UBERON:0006238!1.69e-42!69;UBERON:0003080!2.33e-42!42;UBERON:0001017!1.29e-38!82;UBERON:0007023!3.72e-37!115;UBERON:0005743!2.44e-36!86;UBERON:0000073!6.31e-36!94;UBERON:0001016!6.31e-36!94;UBERON:0003075!1.29e-34!86;UBERON:0007284!1.29e-34!86;UBERON:0002346!1.32e-32!90;UBERON:0001893!2.63e-32!34;UBERON:0001869!9.16e-32!32;UBERON:0002791!2.37e-30!33;UBERON:0002020!9.45e-30!34;UBERON:0003528!9.45e-30!34;UBERON:0003056!8.75e-29!61;UBERON:0002619!6.50e-28!22;UBERON:0001950!1.72e-27!20;UBERON:0000033!3.20e-25!123;UBERON:0000956!3.77e-24!25;UBERON:0000203!3.77e-24!25;UBERON:0000153!1.55e-23!129;UBERON:0007811!1.55e-23!129;UBERON:0004121!1.00e-21!169;UBERON:0000924!6.07e-21!173;UBERON:0006601!6.07e-21!173;UBERON:0001871!2.35e-15!7;UBERON:0001894!3.09e-13!7;UBERON:0006222!3.09e-13!7;UBERON:0003296!5.75e-12!4;UBERON:0010133!5.75e-12!4;UBERON:0000369!1.07e-10!4;UBERON:0002435!1.07e-10!4;UBERON:0000204!1.07e-10!4;UBERON:0010082!1.07e-10!4;UBERON:0000200!1.94e-10!6;UBERON:0004733!2.09e-10!12;UBERON:0002028!2.09e-10!12;UBERON:0007277!2.09e-10!12;UBERON:0002420!3.97e-10!9;UBERON:0007245!3.97e-10!9;UBERON:0010009!3.97e-10!9;UBERON:0010011!3.97e-10!9;UBERON:0000454!3.97e-10!9;UBERON:0000025!8.79e-10!194;UBERON:0004732!1.64e-09!13;UBERON:0004111!5.22e-09!241;UBERON:0005383!1.18e-08!3;UBERON:0005382!1.18e-08!3;UBERON:0000349!1.83e-08!5;UBERON:0001872!2.28e-08!5;UBERON:0002771!2.87e-08!3;UBERON:0003076!4.43e-08!15;UBERON:0003057!4.43e-08!15;UBERON:0002680!7.85e-08!9;UBERON:0001895!7.85e-08!9;UBERON:0010092!7.85e-08!9;UBERON:0000481!9.31e-08!347;UBERON:0002108!3.85e-07!14;UBERON:0002308!3.91e-07!9;UBERON:0000125!3.91e-07!9;UBERON:0000007!6.10e-07!2;UBERON:0000064!6.38e-07!219;UBERON:0000475!9.58e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.65e-42;4!UBERON:0010133;1.65e-42;4!UBERON:0002680;3.23e-29;9!UBERON:0001895;3.23e-29;9!UBERON:0001894;1.83e-24;7!UBERON:0000007;1.20e-22;2!UBERON:0004733;6.38e-22;12!UBERON:0002028;6.38e-22;12!UBERON:0001905;1.02e-21;2!UBERON:0002757;1.02e-21;2!UBERON:0010134;1.02e-21;2!UBERON:0005408;1.02e-21;2!UBERON:0001899;1.02e-21;2!UBERON:0004732;3.09e-20;13!UBERON:0002037;1.18e-16;6!UBERON:0000073;2.67e-16;53!UBERON:0002616;2.67e-16;53!UBERON:0000988;8.08e-15;3!UBERON:0000955;1.48e-12;68!UBERON:0002079;1.32e-11;1!UBERON:0001874;1.32e-11;1!UBERON:0003112;1.32e-11;1!UBERON:0011158;1.32e-11;1!UBERON:0003128;1.32e-11;1!UBERON:0001703;1.32e-11;1!UBERON:0002241;1.32e-11;1!UBERON:0002784;2.37e-11;4!UBERON:0001016;7.87e-09;83!UBERON:0001017;4.15e-08;75!UBERON:0002298;7.33e-08;6!UBERON:0001871;6.20e-07;6!UBERON:0007023;7.73e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.05e-42,4;UBERON:0010133,2.05e-42,4;UBERON:0002680,3.05e-29,9;UBERON:0001895,3.05e-29,9;UBERON:0010092,3.05e-29,9;UBERON:0000073,2.83e-26,53;UBERON:0002616,2.83e-26,53;UBERON:0001049,8.35e-25,56;UBERON:0005068,8.35e-25,56;UBERON:0006241,8.35e-25,56;UBERON:0007135,8.35e-25,56;UBERON:0001894,2.06e-24,7;UBERON:0006222,2.06e-24,7;UBERON:0000007,1.20e-22,2;UBERON:0004733,6.11e-22,12;UBERON:0002028,6.11e-22,12;UBERON:0007277,6.11e-22,12;UBERON:0001905,1.26e-21,2;UBERON:0002757,1.26e-21,2;UBERON:0010134,1.26e-21,2;UBERON:0005408,1.26e-21,2;UBERON:0001899,1.26e-21,2;UBERON:0004732,2.97e-20,13;UBERON:0000955,6.95e-20,68;UBERON:0006238,6.95e-20,68;UBERON:0003076,1.50e-17,15;UBERON:0003057,1.50e-17,15;UBERON:0001016,2.18e-17,89;UBERON:0002037,1.18e-16,6;UBERON:0006215,1.18e-16,6;UBERON:0001017,1.68e-16,81;UBERON:0003075,1.68e-16,82;UBERON:0007284,1.68e-16,82;UBERON:0007023,5.88e-16,114;UBERON:0002346,1.16e-15,86;UBERON:0000988,7.53e-15,3;UBERON:0010314,2.22e-13,132;UBERON:0010371,1.13e-12,104;UBERON:0001874,1.19e-11,1;UBERON:0002780,1.30e-11,41;UBERON:0001890,1.30e-11,41;UBERON:0003080,1.30e-11,41;UBERON:0006240,1.30e-11,41;UBERON:0003112,1.32e-11,1;UBERON:0011158,1.32e-11,1;UBERON:0003128,1.32e-11,1;UBERON:0001703,1.32e-11,1;UBERON:0002241,1.32e-11,1;UBERON:0004761,1.32e-11,1;UBERON:0009617,1.32e-11,1;UBERON:0002079,1.47e-11,1;UBERON:0002784,2.63e-11,4;UBERON:0004121,2.86e-08,171;UBERON:0000924,2.86e-08,171;UBERON:0006601,2.86e-08,171;UBERON:0002298,7.08e-08,6;UBERON:0003056,1.20e-07,61;UBERON:0000025,3.02e-07,192;UBERON:0011216,5.85e-07,223;UBERON:0001871,6.20e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,0,0,0,2.98244294329889,0.703347082052564,0,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,1.04174996959975,0.885741385813839,0.361789315876224,3.05163472634166,3.31737779793674,4.13766666534966,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0,0.242780379534093,0.394584402849391,0,0.61214552326098,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,2.9171149636534,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,2.3184990331373,0.1251909307065,0,0.665574309221114,0.248385611765534,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.431299245586727,0,1.96577348745625,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.478901577171454,0.82046545696302,0,0.276629009856872,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.540300676947157,0,0.826747186004736,0.317079050969534,0.546974809018219,0,0,0,0,2.67850917939143,1.3451348888753,21.2437961482821,8.65116327134931,0,0,0,2.58284985311961,0.394636641377094,0,0,0.078493092850514,1.57115589916002,0,0,0,0,0,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,22.0835360429119,0,0,0.219881033490858,0.603851374266694,0,0.437119121007915,11.2876151126765,0,0.707029641304878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0.653150243690884,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:5903160..5903179,+ | |||
}} |
Latest revision as of 16:00, 28 July 2015
Short description: | p@chr20:5903160..5903179, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903160..5903179, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.73e-07 | 14 |