FFCP PHASE1:Hg19::chr10:24911746..24911793,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:24911746..24911793,- to FFCP PHASE1:Hg19::chr10:24911746..24911793,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57584 | |EntrezGene=57584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23725 | |HGNC=23725 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T5U3 | |UniProt=Q5T5U3 | ||
|association_with_transcript=0bp_to_ENST00000320481,ENST00000483114,uc010qdb.1_5end | |||
|cluster_id=chr10:24911746..24911793,- | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_6_at_ARHGAP21_5end | |||
|id=chr10:24911746..24911793,- | |||
|ontology_enrichment_celltype=CL:0000791!4.53e-15!18;CL:0000789!4.53e-15!18;CL:0002420!4.53e-15!18;CL:0002419!4.53e-15!18;CL:0000790!4.53e-15!18;CL:0000084!7.41e-11!25;CL:0000827!7.41e-11!25;CL:0000624!4.25e-09!6;CL:0000625!4.41e-09!11;CL:0000838!8.82e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.41e-25;18!CL:0000789;2.41e-25;18!CL:0002419;2.41e-25;18!CL:0000084;3.63e-17;25!CL:0000625;7.42e-15;11!CL:0000624;2.50e-14;6!CL:0000898;3.73e-08;3!CL:0000623;5.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.75e-25,18;CL:0000789,2.75e-25,18;CL:0002420,2.75e-25,18;CL:0002419,2.75e-25,18;CL:0000790,2.75e-25,18;CL:0000084,3.99e-17,25;CL:0000827,3.99e-17,25;CL:0000625,7.84e-15,11;CL:0000624,2.75e-14,6;CL:0000838,1.25e-09,52;CL:0000542,2.28e-09,53;CL:0000051,2.28e-09,53;CL:0000898,3.87e-08,3;CL:0000623,4.72e-07,3;CL:0000825,4.72e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.41e-25;18!UBERON:0006601;2.22e-11;82!UBERON:0006215;2.78e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.76e-53!57;UBERON:0005068!4.76e-53!57;UBERON:0006241!4.76e-53!57;UBERON:0007135!4.76e-53!57;UBERON:0002616!3.75e-44!59;UBERON:0002780!1.50e-43!41;UBERON:0001890!1.50e-43!41;UBERON:0006240!1.50e-43!41;UBERON:0003080!3.35e-42!42;UBERON:0002020!5.87e-41!34;UBERON:0003528!5.87e-41!34;UBERON:0001893!6.72e-41!34;UBERON:0007023!6.77e-41!115;UBERON:0000955!1.84e-40!69;UBERON:0006238!1.84e-40!69;UBERON:0002791!1.55e-39!33;UBERON:0001017!1.83e-39!82;UBERON:0001869!4.20e-39!32;UBERON:0005743!2.18e-38!86;UBERON:0002346!3.31e-37!90;UBERON:0000073!6.91e-37!94;UBERON:0001016!6.91e-37!94;UBERON:0003075!3.22e-35!86;UBERON:0007284!3.22e-35!86;UBERON:0002619!2.17e-32!22;UBERON:0001950!7.31e-30!20;UBERON:0000956!9.34e-30!25;UBERON:0000203!9.34e-30!25;UBERON:0003056!1.52e-26!61;UBERON:0000153!2.87e-21!129;UBERON:0007811!2.87e-21!129;UBERON:0000033!2.60e-19!123;UBERON:0000924!7.98e-19!173;UBERON:0006601!7.98e-19!173;UBERON:0004121!2.36e-17!169;UBERON:0002420!8.51e-13!9;UBERON:0007245!8.51e-13!9;UBERON:0010009!8.51e-13!9;UBERON:0010011!8.51e-13!9;UBERON:0000454!8.51e-13!9;UBERON:0002308!1.61e-12!9;UBERON:0000125!1.61e-12!9;UBERON:0001871!6.61e-12!7;UBERON:0003076!9.34e-12!15;UBERON:0003057!9.34e-12!15;UBERON:0009663!3.13e-10!7;UBERON:0000200!3.73e-10!6;UBERON:0004733!7.92e-09!12;UBERON:0002028!7.92e-09!12;UBERON:0007277!7.92e-09!12;UBERON:0000178!1.39e-08!15;UBERON:0000179!1.39e-08!15;UBERON:0000463!1.39e-08!15;UBERON:0002021!1.63e-08!5;UBERON:0001872!1.95e-08!5;UBERON:0000349!4.94e-08!5;UBERON:0004732!5.68e-08!13;UBERON:0002298!1.20e-07!8;UBERON:0000369!3.30e-07!4;UBERON:0002435!3.30e-07!4;UBERON:0000204!3.30e-07!4;UBERON:0010082!3.30e-07!4;UBERON:0000025!4.26e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.69e-56;32!UBERON:0002619;8.84e-54;22!UBERON:0003528;1.36e-53;34!UBERON:0002020;1.36e-53;34!UBERON:0002791;1.41e-52;32!UBERON:0001893;3.51e-50;34!UBERON:0001950;1.57e-49;20!UBERON:0000956;9.51e-47;25!UBERON:0000203;9.51e-47;25!UBERON:0002780;1.62e-43;41!UBERON:0001890;1.62e-43;41!UBERON:0000073;3.01e-38;53!UBERON:0002616;3.01e-38;53!UBERON:0000955;1.93e-28;68!UBERON:0001017;9.49e-25;75!UBERON:0001016;3.24e-20;83!UBERON:0002420;5.49e-17;9!UBERON:0007245;5.49e-17;9!UBERON:0010009;5.49e-17;9!UBERON:0010011;5.49e-17;9!UBERON:0000454;5.49e-17;9!UBERON:0001871;1.43e-16;6!UBERON:0000125;1.44e-16;9!UBERON:0002308;1.44e-16;9!UBERON:0000200;4.76e-16;6!UBERON:0002021;2.54e-13;5!UBERON:0001872;3.61e-13;5!UBERON:0009663;1.04e-12;7!UBERON:0000349;1.86e-12;5!UBERON:0004733;6.02e-12;12!UBERON:0002028;6.02e-12;12!UBERON:0000369;4.13e-11;4!UBERON:0002435;4.13e-11;4!UBERON:0000204;4.13e-11;4!UBERON:0007023;4.27e-11;114!UBERON:0004732;6.54e-11;13!UBERON:0002680;9.48e-10;9!UBERON:0001895;9.48e-10;9!UBERON:0002298;2.84e-09;6!UBERON:0001870;5.26e-09;3!UBERON:0005383;7.64e-09;3!UBERON:0005382;7.64e-09;3!UBERON:0011216;6.04e-08;132!UBERON:0000988;1.67e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.07e-71,53;UBERON:0002616,1.07e-71,53;UBERON:0001049,8.74e-71,56;UBERON:0005068,8.74e-71,56;UBERON:0006241,8.74e-71,56;UBERON:0007135,8.74e-71,56;UBERON:0001869,1.41e-62,32;UBERON:0003528,3.32e-62,34;UBERON:0002020,3.32e-62,34;UBERON:0000955,3.29e-61,68;UBERON:0006238,3.29e-61,68;UBERON:0002780,5.71e-61,41;UBERON:0001890,5.71e-61,41;UBERON:0003080,5.71e-61,41;UBERON:0006240,5.71e-61,41;UBERON:0001893,1.82e-58,34;UBERON:0002791,3.58e-58,32;UBERON:0001017,9.14e-55,81;UBERON:0002619,8.45e-54,22;UBERON:0001950,1.67e-49,20;UBERON:0002346,2.14e-48,86;UBERON:0001016,4.46e-48,89;UBERON:0003075,8.20e-47,82;UBERON:0007284,8.20e-47,82;UBERON:0000956,9.14e-47,25;UBERON:0000203,9.14e-47,25;UBERON:0003056,2.89e-40,61;UBERON:0007023,7.04e-36,114;UBERON:0010371,2.46e-34,104;UBERON:0010314,5.24e-26,132;UBERON:0004121,2.09e-22,171;UBERON:0000924,2.09e-22,171;UBERON:0006601,2.09e-22,171;UBERON:0002420,6.19e-17,9;UBERON:0007245,6.19e-17,9;UBERON:0010009,6.19e-17,9;UBERON:0010011,6.19e-17,9;UBERON:0000454,6.19e-17,9;UBERON:0001871,1.47e-16,6;UBERON:0000125,1.64e-16,9;UBERON:0002308,1.64e-16,9;UBERON:0000200,4.53e-16,6;UBERON:0011216,2.42e-14,223;UBERON:0002021,2.64e-13,5;UBERON:0001872,3.57e-13,5;UBERON:0009663,1.15e-12,7;UBERON:0000349,1.71e-12,5;UBERON:0000025,2.05e-12,192;UBERON:0004733,6.35e-12,12;UBERON:0002028,6.35e-12,12;UBERON:0007277,6.35e-12,12;UBERON:0003076,1.11e-11,15;UBERON:0003057,1.11e-11,15;UBERON:0000369,4.19e-11,4;UBERON:0002435,4.19e-11,4;UBERON:0000204,4.19e-11,4;UBERON:0010082,4.19e-11,4;UBERON:0004732,6.87e-11,13;UBERON:0002680,1.03e-09,9;UBERON:0001895,1.03e-09,9;UBERON:0010092,1.03e-09,9;UBERON:0002298,3.03e-09,6;UBERON:0001870,5.33e-09,3;UBERON:0005383,7.64e-09,3;UBERON:0005382,7.64e-09,3;UBERON:0004111,7.68e-08,240;UBERON:0000988,1.90e-07,3 | |||
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| ||
|short_description=p6@ARHGAP21 | |||
}} | }} |
Latest revision as of 16:50, 17 September 2015
Short description: | p6@ARHGAP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARHGAP21_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 0bp_to_ENST00000320481, ENST00000483114, uc010qdb.1_5end |
EntrezGene: | ARHGAP21 |
HGNC: | 23725 |
UniProt: | Q5T5U3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.75e-25 | 18 |
alpha-beta T cell | 2.75e-25 | 18 |
immature T cell | 2.75e-25 | 18 |
mature T cell | 2.75e-25 | 18 |
immature alpha-beta T cell | 2.75e-25 | 18 |
T cell | 3.99e-17 | 25 |
pro-T cell | 3.99e-17 | 25 |
CD8-positive, alpha-beta T cell | 7.84e-15 | 11 |
CD4-positive, alpha-beta T cell | 2.75e-14 | 6 |
lymphoid lineage restricted progenitor cell | 1.25e-09 | 52 |
lymphocyte | 2.28e-09 | 53 |
common lymphoid progenitor | 2.28e-09 | 53 |
naive T cell | 3.87e-08 | 3 |
natural killer cell | 4.72e-07 | 3 |
pro-NK cell | 4.72e-07 | 3 |