FFCP PHASE1:Hg19::chr17:27333028..27333089,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:27333028..27333089,- to FFCP PHASE1:Hg19::chr17:27333028..27333089,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124925 | |EntrezGene=124925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15955 | |HGNC=15955 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFF1,Q53EL9 | |UniProt=C9JFF1,Q53EL9 | ||
|association_with_transcript=0bp_to_ENST00000335960,ENST00000360295,ENST00000442608,NM_001098635,NM_178860,uc002hdp.2,uc010cry.1,uc010crz.1_5end | |||
|cluster_id=chr17:27333028..27333089,- | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_1_at_SEZ6_5end | |||
|id=chr17:27333028..27333089,- | |||
|ontology_enrichment_celltype=CL:0002319!4.31e-10!25;CL:0000047!1.95e-09!8;CL:0000133!5.45e-08!59;CL:0000540!2.65e-07!6;CL:0000031!2.65e-07!6;CL:0000404!2.65e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.96e-13;25!CL:0000540;1.80e-10;6!CL:0000404;1.80e-10;6!CL:0002322;1.50e-07;5!CL:0002321;1.67e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.80e-14,8;CL:0002319,1.80e-13,25;CL:0000133,1.95e-11,59;CL:0000540,1.62e-10,6;CL:0000031,1.62e-10,6;CL:0000404,1.62e-10,6;CL:0000221,2.61e-08,72;CL:0002322,1.42e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.48e-19;82!CL:0000031;1.80e-10;6!UBERON:0006215;3.41e-07;3 | |||
|ontology_enrichment_disease=DOID:3095!2.73e-08!22;DOID:2994!2.73e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:169;1.07e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.11e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.46e-61!94;UBERON:0001016!6.46e-61!94;UBERON:0001017!6.61e-60!82;UBERON:0005743!1.62e-59!86;UBERON:0001049!1.05e-54!57;UBERON:0005068!1.05e-54!57;UBERON:0006241!1.05e-54!57;UBERON:0007135!1.05e-54!57;UBERON:0002346!1.21e-47!90;UBERON:0000955!9.06e-47!69;UBERON:0006238!9.06e-47!69;UBERON:0003075!2.90e-46!86;UBERON:0007284!2.90e-46!86;UBERON:0002616!9.12e-46!59;UBERON:0002780!8.10e-43!41;UBERON:0001890!8.10e-43!41;UBERON:0006240!8.10e-43!41;UBERON:0003080!1.98e-41!42;UBERON:0000924!3.84e-36!173;UBERON:0006601!3.84e-36!173;UBERON:0002020!7.38e-36!34;UBERON:0003528!7.38e-36!34;UBERON:0001893!9.29e-36!34;UBERON:0004121!1.19e-34!169;UBERON:0002791!1.22e-34!33;UBERON:0001869!4.74e-34!32;UBERON:0003056!6.12e-34!61;UBERON:0007023!6.00e-33!115;UBERON:0000956!4.69e-26!25;UBERON:0000203!4.69e-26!25;UBERON:0000153!1.15e-24!129;UBERON:0007811!1.15e-24!129;UBERON:0000033!2.11e-24!123;UBERON:0002619!9.71e-24!22;UBERON:0001950!1.35e-21!20;UBERON:0003076!6.44e-14!15;UBERON:0003057!6.44e-14!15;UBERON:0004732!3.55e-12!13;UBERON:0002420!2.25e-11!9;UBERON:0007245!2.25e-11!9;UBERON:0010009!2.25e-11!9;UBERON:0010011!2.25e-11!9;UBERON:0000454!2.25e-11!9;UBERON:0004733!2.64e-11!12;UBERON:0002028!2.64e-11!12;UBERON:0007277!2.64e-11!12;UBERON:0002308!3.59e-11!9;UBERON:0000125!3.59e-11!9;UBERON:0000064!3.38e-10!219;UBERON:0000025!1.57e-09!194;UBERON:0000922!3.45e-09!612;UBERON:0009663!4.26e-09!7;UBERON:0002680!1.51e-08!9;UBERON:0001895!1.51e-08!9;UBERON:0010092!1.51e-08!9;UBERON:0001894!2.39e-08!7;UBERON:0006222!2.39e-08!7;UBERON:0001871!6.57e-08!7;UBERON:0000200!7.45e-08!6;UBERON:0000349!3.18e-07!5;UBERON:0000483!4.31e-07!309;UBERON:0002298!5.68e-07!8;UBERON:0001872!6.55e-07!5;UBERON:0002050!6.64e-07!605;UBERON:0005423!6.64e-07!605;UBERON:0000119!8.00e-07!312;UBERON:0002021!8.32e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.97e-46;53!UBERON:0002616;3.97e-46;53!UBERON:0002780;1.93e-45;41!UBERON:0001890;1.93e-45;41!UBERON:0001893;5.41e-45;34!UBERON:0003528;5.88e-45;34!UBERON:0002020;5.88e-45;34!UBERON:0001869;1.76e-44;32!UBERON:0002791;3.67e-44;32!UBERON:0000956;3.11e-37;25!UBERON:0000203;3.11e-37;25!UBERON:0002619;1.58e-36;22!UBERON:0000955;5.99e-34;68!UBERON:0001950;3.62e-33;20!UBERON:0001016;5.96e-32;83!UBERON:0001017;7.25e-32;75!UBERON:0004732;2.14e-18;13!UBERON:0004733;4.90e-17;12!UBERON:0002028;4.90e-17;12!UBERON:0002420;7.51e-17;9!UBERON:0007245;7.51e-17;9!UBERON:0010009;7.51e-17;9!UBERON:0010011;7.51e-17;9!UBERON:0000454;7.51e-17;9!UBERON:0000125;1.56e-16;9!UBERON:0002308;1.56e-16;9!UBERON:0009663;2.66e-13;7!UBERON:0002680;9.68e-13;9!UBERON:0001895;9.68e-13;9!UBERON:0001894;3.91e-12;7!UBERON:0007023;1.87e-11;114!UBERON:0000200;2.25e-11;6!UBERON:0011216;3.07e-11;132!UBERON:0002298;9.06e-11;6!UBERON:0000349;2.13e-10;5!UBERON:0001871;3.07e-10;6!UBERON:0001872;6.51e-10;5!UBERON:0002021;9.45e-10;5!UBERON:0000369;3.00e-09;4!UBERON:0002435;3.00e-09;4!UBERON:0000204;3.00e-09;4!UBERON:0002037;4.91e-08;6!UBERON:0002784;1.22e-07;4!UBERON:0003296;1.88e-07;4!UBERON:0010133;1.88e-07;4!UBERON:0005383;2.26e-07;3!UBERON:0005382;2.26e-07;3!UBERON:0010314;4.87e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.93e-96,89;UBERON:0001017,3.09e-93,81;UBERON:0001049,1.57e-84,56;UBERON:0005068,1.57e-84,56;UBERON:0006241,1.57e-84,56;UBERON:0007135,1.57e-84,56;UBERON:0000073,4.68e-80,53;UBERON:0002616,4.68e-80,53;UBERON:0000955,1.37e-72,68;UBERON:0006238,1.37e-72,68;UBERON:0002780,2.02e-63,41;UBERON:0001890,2.02e-63,41;UBERON:0003080,2.02e-63,41;UBERON:0006240,2.02e-63,41;UBERON:0003075,5.39e-62,82;UBERON:0007284,5.39e-62,82;UBERON:0002346,1.38e-60,86;UBERON:0003528,1.58e-52,34;UBERON:0002020,1.58e-52,34;UBERON:0001893,2.25e-52,34;UBERON:0004121,1.00e-49,171;UBERON:0000924,1.00e-49,171;UBERON:0006601,1.00e-49,171;UBERON:0001869,1.08e-49,32;UBERON:0010371,2.71e-49,104;UBERON:0002791,3.65e-49,32;UBERON:0003056,6.06e-48,61;UBERON:0011216,8.47e-38,223;UBERON:0000956,3.06e-37,25;UBERON:0000203,3.06e-37,25;UBERON:0002619,1.62e-36,22;UBERON:0010314,7.77e-35,132;UBERON:0007023,2.85e-33,114;UBERON:0001950,3.69e-33,20;UBERON:0003076,4.00e-21,15;UBERON:0003057,4.00e-21,15;UBERON:0004732,2.10e-18,13;UBERON:0004733,4.82e-17,12;UBERON:0002028,4.82e-17,12;UBERON:0007277,4.82e-17,12;UBERON:0000025,4.83e-17,192;UBERON:0002420,7.44e-17,9;UBERON:0007245,7.44e-17,9;UBERON:0010009,7.44e-17,9;UBERON:0010011,7.44e-17,9;UBERON:0000454,7.44e-17,9;UBERON:0000125,1.54e-16,9;UBERON:0002308,1.54e-16,9;UBERON:0009663,2.64e-13,7;UBERON:0002680,9.61e-13,9;UBERON:0001895,9.61e-13,9;UBERON:0010092,9.61e-13,9;UBERON:0001894,3.85e-12,7;UBERON:0006222,3.85e-12,7;UBERON:0000200,2.25e-11,6;UBERON:0002298,8.98e-11,6;UBERON:0004111,1.29e-10,240;UBERON:0000349,2.15e-10,5;UBERON:0001871,3.10e-10,6;UBERON:0001872,6.57e-10,5;UBERON:0002021,9.54e-10,5;UBERON:0000369,3.00e-09,4;UBERON:0002435,3.00e-09,4;UBERON:0000204,3.00e-09,4;UBERON:0010082,3.00e-09,4;UBERON:0000483,9.22e-09,306;UBERON:0000119,1.58e-08,309;UBERON:0002037,4.87e-08,6;UBERON:0006215,4.87e-08,6;UBERON:0002784,1.20e-07,4;UBERON:0003296,1.88e-07,4;UBERON:0010133,1.88e-07,4;UBERON:0005383,2.26e-07,3;UBERON:0005382,2.26e-07,3;UBERON:0000922,2.42e-07,592 | |||
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| ||
|short_description=p1@SEZ6 | |||
}} | }} |
Latest revision as of 08:00, 19 September 2015
Short description: | p1@SEZ6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEZ6_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | 0bp_to_ENST00000335960, ENST00000360295, ENST00000442608, NM_001098635, NM_178860, uc002hdp.2, uc010cry.1, uc010crz.1_5end |
EntrezGene: | SEZ6 |
HGNC: | 15955 |
UniProt: | C9JFF1Q53EL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.80e-14 | 8 |
neural cell | 1.80e-13 | 25 |
neurectodermal cell | 1.95e-11 | 59 |
neuron | 1.62e-10 | 6 |
neuroblast | 1.62e-10 | 6 |
electrically signaling cell | 1.62e-10 | 6 |
ectodermal cell | 2.61e-08 | 72 |
embryonic stem cell | 1.42e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.11e-07 | 6 |