FFCP PHASE1:Hg19::chr17:9940034..9940046,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:9940034..9940046,- to FFCP PHASE1:Hg19::chr17:9940034..9940046,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8522 | |EntrezGene=8522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4169 | |HGNC=4169 | ||
|TSSclassifier=strong | |||
|UniProt=A8KAC2,O60861 | |UniProt=A8KAC2,O60861 | ||
|association_with_transcript=17bp_to_ENST00000396115,NM_201432,uc002gmj.1_5end | |||
|cluster_id=chr17:9940034..9940046,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_13_at_GAS7_5end | |||
|id=chr17:9940034..9940046,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.75e-16;82!UBERON:0006241;3.87e-10;3!UBERON:0003057;3.87e-10;3!UBERON:0002532;2.15e-08;206!UBERON:0010316;2.15e-08;206!UBERON:0005062;3.00e-07;4!UBERON:0007284;3.00e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.27e-79!115;UBERON:0001049!2.71e-42!57;UBERON:0005068!2.71e-42!57;UBERON:0006241!2.71e-42!57;UBERON:0007135!2.71e-42!57;UBERON:0002616!1.36e-33!59;UBERON:0003075!2.56e-33!86;UBERON:0007284!2.56e-33!86;UBERON:0002780!4.45e-32!41;UBERON:0001890!4.45e-32!41;UBERON:0006240!4.45e-32!41;UBERON:0001017!8.35e-32!82;UBERON:0005743!3.95e-31!86;UBERON:0002346!4.25e-31!90;UBERON:0003080!4.59e-31!42;UBERON:0000955!9.50e-30!69;UBERON:0006238!9.50e-30!69;UBERON:0000073!3.00e-28!94;UBERON:0001016!3.00e-28!94;UBERON:0002020!1.44e-27!34;UBERON:0003528!1.44e-27!34;UBERON:0001893!1.53e-27!34;UBERON:0002791!3.61e-26!33;UBERON:0001869!1.34e-24!32;UBERON:0003056!9.09e-21!61;UBERON:0002619!5.62e-19!22;UBERON:0000153!1.16e-17!129;UBERON:0007811!1.16e-17!129;UBERON:0000033!1.15e-16!123;UBERON:0001950!1.19e-16!20;UBERON:0004121!2.14e-16!169;UBERON:0000956!4.18e-16!25;UBERON:0000203!4.18e-16!25;UBERON:0000924!1.27e-15!173;UBERON:0006601!1.27e-15!173;UBERON:0002308!4.20e-14!9;UBERON:0000125!4.20e-14!9;UBERON:0000025!1.89e-13!194;UBERON:0003076!4.41e-12!15;UBERON:0003057!4.41e-12!15;UBERON:0004111!7.19e-12!241;UBERON:0009663!5.21e-11!7;UBERON:0002298!7.95e-11!8;UBERON:0002420!1.20e-10!9;UBERON:0007245!1.20e-10!9;UBERON:0010009!1.20e-10!9;UBERON:0010011!1.20e-10!9;UBERON:0000454!1.20e-10!9;UBERON:0000062!1.47e-10!511;UBERON:0000200!7.48e-10!6;UBERON:0000477!8.20e-10!286;UBERON:0004732!2.34e-09!13;UBERON:0004733!4.74e-08!12;UBERON:0002028!4.74e-08!12;UBERON:0007277!4.74e-08!12;UBERON:0000922!2.20e-07!612;UBERON:0002050!4.94e-07!605;UBERON:0005423!4.94e-07!605;UBERON:0000483!5.72e-07!309;UBERON:0000468!8.02e-07!659;UBERON:0000467!8.19e-07!625;UBERON:0000480!9.37e-07!626;UBERON:0000119!9.61e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.55e-35;34!UBERON:0003528;2.32e-33;34!UBERON:0002020;2.32e-33;34!UBERON:0002780;2.77e-32;41!UBERON:0001890;2.77e-32;41!UBERON:0002791;1.11e-31;32!UBERON:0001869;1.56e-31;32!UBERON:0002619;3.56e-31;22!UBERON:0000073;5.33e-31;53!UBERON:0002616;5.33e-31;53!UBERON:0001950;1.64e-30;20!UBERON:0000956;4.73e-27;25!UBERON:0000203;4.73e-27;25!UBERON:0001017;8.22e-19;75!UBERON:0000955;9.91e-19;68!UBERON:0002298;1.04e-18;6!UBERON:0007023;1.19e-16;114!UBERON:0000200;1.64e-16;6!UBERON:0000125;1.38e-15;9!UBERON:0002308;1.38e-15;9!UBERON:0001016;1.79e-14;83!UBERON:0007100;3.98e-11;25!UBERON:0002420;5.01e-11;9!UBERON:0007245;5.01e-11;9!UBERON:0010009;5.01e-11;9!UBERON:0010011;5.01e-11;9!UBERON:0000454;5.01e-11;9!UBERON:0004732;5.31e-11;13!UBERON:0009663;2.07e-10;7!UBERON:0000988;3.14e-10;3!UBERON:0001896;3.38e-10;3!UBERON:0005290;3.38e-10;3!UBERON:0002240;3.87e-10;3!UBERON:0005174;3.87e-10;3!UBERON:0001137;3.87e-10;3!UBERON:0001872;1.07e-09;5!UBERON:0003978;1.49e-09;3!UBERON:0000946;1.49e-09;3!UBERON:0002021;2.78e-09;5!UBERON:0004733;6.37e-09;12!UBERON:0002028;6.37e-09;12!UBERON:0001870;6.76e-09;3!UBERON:0004151;8.78e-09;3!UBERON:0011216;1.36e-07;132!UBERON:0002784;2.00e-07;4!UBERON:0005162;2.02e-07;2!UBERON:0000122;2.02e-07;2!UBERON:0002148;2.39e-07;2!UBERON:0006331;2.39e-07;2!UBERON:0009662;2.39e-07;2!UBERON:0001894;3.35e-07;7!UBERON:0001897;3.69e-07;2!UBERON:0010225;3.69e-07;2!UBERON:0002133;3.74e-07;2!UBERON:0001875;4.28e-07;2!UBERON:0006514;4.28e-07;2!UBERON:0000948;8.00e-07;22!UBERON:0010314;8.34e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.30e-63,114;UBERON:0001049,9.27e-62,56;UBERON:0005068,9.27e-62,56;UBERON:0006241,9.27e-62,56;UBERON:0007135,9.27e-62,56;UBERON:0000073,2.73e-54,53;UBERON:0002616,2.73e-54,53;UBERON:0003075,3.65e-52,82;UBERON:0007284,3.65e-52,82;UBERON:0002346,3.13e-49,86;UBERON:0002780,8.00e-47,41;UBERON:0001890,8.00e-47,41;UBERON:0003080,8.00e-47,41;UBERON:0006240,8.00e-47,41;UBERON:0000955,3.23e-45,68;UBERON:0006238,3.23e-45,68;UBERON:0001017,3.18e-44,81;UBERON:0010371,4.05e-43,104;UBERON:0001016,2.91e-41,89;UBERON:0003528,4.84e-41,34;UBERON:0002020,4.84e-41,34;UBERON:0001893,5.32e-41,34;UBERON:0010314,1.38e-38,132;UBERON:0002791,4.48e-36,32;UBERON:0001869,6.69e-36,32;UBERON:0003056,5.75e-34,61;UBERON:0002619,2.68e-31,22;UBERON:0001950,1.29e-30,20;UBERON:0000956,3.69e-27,25;UBERON:0000203,3.69e-27,25;UBERON:0004121,4.49e-24,171;UBERON:0000924,4.49e-24,171;UBERON:0006601,4.49e-24,171;UBERON:0000025,2.74e-20,192;UBERON:0002298,1.03e-18,6;UBERON:0000200,1.30e-16,6;UBERON:0004111,1.37e-16,240;UBERON:0011216,1.89e-16,223;UBERON:0000125,1.37e-15,9;UBERON:0002308,1.37e-15,9;UBERON:0003076,1.81e-15,15;UBERON:0003057,1.81e-15,15;UBERON:0000483,5.10e-12,306;UBERON:0000119,8.78e-12,309;UBERON:0002420,4.89e-11,9;UBERON:0007245,4.89e-11,9;UBERON:0010009,4.89e-11,9;UBERON:0010011,4.89e-11,9;UBERON:0000454,4.89e-11,9;UBERON:0004732,5.32e-11,13;UBERON:0009663,2.05e-10,7;UBERON:0000988,3.10e-10,3;UBERON:0001896,3.39e-10,3;UBERON:0005290,3.39e-10,3;UBERON:0010096,3.39e-10,3;UBERON:0007100,3.77e-10,27;UBERON:0002240,3.94e-10,3;UBERON:0005174,3.94e-10,3;UBERON:0001137,3.94e-10,3;UBERON:0001872,8.72e-10,5;UBERON:0003978,1.39e-09,3;UBERON:0009751,1.39e-09,3;UBERON:0000946,1.39e-09,3;UBERON:0002523,1.39e-09,3;UBERON:0005983,1.39e-09,3;UBERON:0002165,1.39e-09,3;UBERON:0002062,1.39e-09,3;UBERON:0007280,1.39e-09,3;UBERON:0002021,3.11e-09,5;UBERON:0001870,5.42e-09,3;UBERON:0004733,6.34e-09,12;UBERON:0002028,6.34e-09,12;UBERON:0007277,6.34e-09,12;UBERON:0004151,6.96e-09,3;UBERON:0003103,1.05e-07,68;UBERON:0002784,1.78e-07,4;UBERON:0005162,2.05e-07,2;UBERON:0000122,2.05e-07,2;UBERON:0002148,2.39e-07,2;UBERON:0006331,2.39e-07,2;UBERON:0009662,2.39e-07,2;UBERON:0001894,3.10e-07,7;UBERON:0006222,3.10e-07,7;UBERON:0001897,3.23e-07,2;UBERON:0010225,3.23e-07,2;UBERON:0002133,3.98e-07,2;UBERON:0001875,4.48e-07,2;UBERON:0006514,4.48e-07,2 | |||
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| ||
|short_description=p13@GAS7 | |||
}} | }} |
Latest revision as of 17:37, 18 September 2015
Short description: | p13@GAS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GAS7_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 17bp_to_ENST00000396115, NM_201432, uc002gmj.1_5end |
EntrezGene: | GAS7 |
HGNC: | 4169 |
UniProt: | A8KAC2O60861 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data