FFCP PHASE1:Hg19::chr19:41036371..41036417,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:41036371..41036417,+ to FFCP PHASE1:Hg19::chr19:41036371..41036417,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57731 | |EntrezGene=57731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14896 | |HGNC=14896 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGQ5,Q9H253 | |UniProt=E9PGQ5,Q9H253 | ||
|association_with_transcript=0bp_to_ENST00000392023,NM_025213,uc002ooa.2,uc010egy.1_5end | |||
|cluster_id=chr19:41036371..41036417,+ | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_1_at_SPTBN4_5end | |||
|id=chr19:41036371..41036417,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-20;82!UBERON:0006215;8.31e-10;3 | |||
|ontology_enrichment_disease=DOID:0050687!4.87e-09!143;DOID:305!3.76e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.00e-49!57;UBERON:0005068!4.00e-49!57;UBERON:0006241!4.00e-49!57;UBERON:0007135!4.00e-49!57;UBERON:0001017!5.34e-48!82;UBERON:0005743!1.72e-46!86;UBERON:0000073!3.43e-46!94;UBERON:0001016!3.43e-46!94;UBERON:0002780!7.64e-41!41;UBERON:0001890!7.64e-41!41;UBERON:0006240!7.64e-41!41;UBERON:0002616!1.52e-40!59;UBERON:0000955!2.85e-40!69;UBERON:0006238!2.85e-40!69;UBERON:0003080!1.65e-39!42;UBERON:0002346!6.54e-38!90;UBERON:0003075!1.86e-36!86;UBERON:0007284!1.86e-36!86;UBERON:0002020!4.10e-33!34;UBERON:0003528!4.10e-33!34;UBERON:0001893!4.89e-33!34;UBERON:0007023!1.72e-32!115;UBERON:0002791!7.76e-32!33;UBERON:0001869!2.70e-31!32;UBERON:0003056!2.02e-29!61;UBERON:0002619!8.03e-28!22;UBERON:0001950!1.36e-25!20;UBERON:0000924!6.23e-24!173;UBERON:0006601!6.23e-24!173;UBERON:0000956!1.65e-23!25;UBERON:0000203!1.65e-23!25;UBERON:0004121!1.29e-22!169;UBERON:0000033!7.52e-21!123;UBERON:0000153!1.35e-20!129;UBERON:0007811!1.35e-20!129;UBERON:0002420!3.34e-11!9;UBERON:0007245!3.34e-11!9;UBERON:0010009!3.34e-11!9;UBERON:0010011!3.34e-11!9;UBERON:0000454!3.34e-11!9;UBERON:0002308!4.77e-11!9;UBERON:0000125!4.77e-11!9;UBERON:0003076!1.18e-10!15;UBERON:0003057!1.18e-10!15;UBERON:0001871!1.26e-10!7;UBERON:0000025!3.49e-10!194;UBERON:0001894!3.73e-09!7;UBERON:0006222!3.73e-09!7;UBERON:0009663!6.77e-09!7;UBERON:0000200!9.19e-09!6;UBERON:0004733!6.18e-08!12;UBERON:0002028!6.18e-08!12;UBERON:0007277!6.18e-08!12;UBERON:0000475!8.31e-08!365;UBERON:0000483!1.22e-07!309;UBERON:0004111!1.51e-07!241;UBERON:0001872!2.11e-07!5;UBERON:0000119!2.34e-07!312;UBERON:0000349!2.78e-07!5;UBERON:0002021!3.06e-07!5;UBERON:0002298!3.14e-07!8;UBERON:0004732!4.01e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.23e-60;32!UBERON:0002780;6.38e-60;41!UBERON:0001890;6.38e-60;41!UBERON:0002619;5.31e-58;22!UBERON:0001893;6.83e-58;34!UBERON:0003528;7.50e-58;34!UBERON:0002020;7.50e-58;34!UBERON:0002791;1.58e-56;32!UBERON:0001950;3.30e-53;20!UBERON:0000073;1.46e-52;53!UBERON:0002616;1.46e-52;53!UBERON:0000956;1.69e-50;25!UBERON:0000203;1.69e-50;25!UBERON:0000955;1.73e-39;68!UBERON:0001017;7.77e-37;75!UBERON:0001016;8.86e-33;83!UBERON:0001871;2.20e-18;6!UBERON:0002420;3.62e-18;9!UBERON:0007245;3.62e-18;9!UBERON:0010009;3.62e-18;9!UBERON:0010011;3.62e-18;9!UBERON:0000454;3.62e-18;9!UBERON:0000125;7.17e-18;9!UBERON:0002308;7.17e-18;9!UBERON:0001894;8.25e-18;7!UBERON:0000200;5.74e-17;6!UBERON:0001872;4.40e-14;5!UBERON:0000349;8.67e-14;5!UBERON:0002021;1.01e-13;5!UBERON:0004733;1.31e-13;12!UBERON:0002028;1.31e-13;12!UBERON:0007023;1.87e-13;114!UBERON:0011216;2.04e-13;132!UBERON:0009663;2.44e-13;7!UBERON:0004732;1.93e-12;13!UBERON:0000369;1.83e-11;4!UBERON:0002435;1.83e-11;4!UBERON:0000204;1.83e-11;4!UBERON:0003296;3.59e-11;4!UBERON:0010133;3.59e-11;4!UBERON:0002784;6.45e-11;4!UBERON:0002298;6.76e-11;6!UBERON:0002680;7.10e-11;9!UBERON:0001895;7.10e-11;9!UBERON:0001870;3.12e-09;3!UBERON:0005383;5.35e-09;3!UBERON:0005382;5.35e-09;3!UBERON:0000988;1.17e-08;3!UBERON:0010314;4.11e-08;132!UBERON:0002771;9.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.57e-98,56;UBERON:0005068,1.57e-98,56;UBERON:0006241,1.57e-98,56;UBERON:0007135,1.57e-98,56;UBERON:0000073,6.76e-96,53;UBERON:0002616,6.76e-96,53;UBERON:0000955,7.16e-89,68;UBERON:0006238,7.16e-89,68;UBERON:0002780,6.04e-84,41;UBERON:0001890,6.04e-84,41;UBERON:0003080,6.04e-84,41;UBERON:0006240,6.04e-84,41;UBERON:0001017,1.87e-82,81;UBERON:0001016,1.31e-81,89;UBERON:0003075,2.94e-69,82;UBERON:0007284,2.94e-69,82;UBERON:0001869,2.32e-67,32;UBERON:0003528,2.74e-67,34;UBERON:0002020,2.74e-67,34;UBERON:0001893,3.99e-67,34;UBERON:0002346,1.96e-65,86;UBERON:0002791,1.56e-62,32;UBERON:0003056,2.32e-59,61;UBERON:0002619,5.54e-58,22;UBERON:0010371,1.42e-56,104;UBERON:0001950,3.63e-53,20;UBERON:0000956,1.76e-50,25;UBERON:0000203,1.76e-50,25;UBERON:0007023,3.75e-41,114;UBERON:0004121,6.14e-41,171;UBERON:0000924,6.14e-41,171;UBERON:0006601,6.14e-41,171;UBERON:0010314,5.32e-40,132;UBERON:0011216,7.83e-33,223;UBERON:0000025,3.92e-23,192;UBERON:0001871,2.32e-18,6;UBERON:0002420,4.11e-18,9;UBERON:0007245,4.11e-18,9;UBERON:0010009,4.11e-18,9;UBERON:0010011,4.11e-18,9;UBERON:0000454,4.11e-18,9;UBERON:0000125,8.14e-18,9;UBERON:0002308,8.14e-18,9;UBERON:0001894,8.48e-18,7;UBERON:0006222,8.48e-18,7;UBERON:0000200,5.82e-17,6;UBERON:0003076,3.05e-16,15;UBERON:0003057,3.05e-16,15;UBERON:0004111,6.96e-16,240;UBERON:0001872,4.65e-14,5;UBERON:0000349,8.33e-14,5;UBERON:0002021,1.03e-13,5;UBERON:0004733,1.30e-13,12;UBERON:0002028,1.30e-13,12;UBERON:0007277,1.30e-13,12;UBERON:0009663,2.76e-13,7;UBERON:0000483,2.94e-13,306;UBERON:0000119,5.37e-13,309;UBERON:0004732,1.91e-12,13;UBERON:0000369,1.91e-11,4;UBERON:0002435,1.91e-11,4;UBERON:0000204,1.91e-11,4;UBERON:0010082,1.91e-11,4;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0002784,6.21e-11,4;UBERON:0002298,6.69e-11,6;UBERON:0002680,7.05e-11,9;UBERON:0001895,7.05e-11,9;UBERON:0010092,7.05e-11,9;UBERON:0001870,3.04e-09,3;UBERON:0005383,5.49e-09,3;UBERON:0005382,5.49e-09,3;UBERON:0000988,1.15e-08,3;UBERON:0002771,9.56e-07,2 | |||
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| ||
|short_description=p1@SPTBN4 | |||
}} | }} |
Latest revision as of 02:16, 18 September 2015
Short description: | p1@SPTBN4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPTBN4_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 0bp_to_ENST00000392023, NM_025213, uc002ooa.2, uc010egy.1_5end |
EntrezGene: | SPTBN4 |
HGNC: | 14896 |
UniProt: | E9PGQ5Q9H253 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data