FFCP PHASE1:Hg19::chr20:9495410..9495426,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:9495410..9495426,+ to FFCP PHASE1:Hg19::chr20:9495410..9495426,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24141 | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |HGNC=16097 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |UniProt=Q9UJQ1 | ||
|association_with_transcript=139bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | |||
|cluster_id=chr20:9495410..9495426,+ | |||
|coexpression_cluster_id=C1485 | |||
|description=CAGE_peak_5_at_LAMP5_5end | |||
|id=chr20:9495410..9495426,+ | |||
|ontology_enrichment_celltype=CL:0002322!8.56e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000784;3.68e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.47e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.37e-14;82!UBERON:0006215;1.19e-08;3!UBERON:0010122;1.53e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.90e-62!57;UBERON:0005068!3.90e-62!57;UBERON:0006241!3.90e-62!57;UBERON:0007135!3.90e-62!57;UBERON:0001017!1.16e-56!82;UBERON:0005743!3.63e-55!86;UBERON:0000073!4.59e-52!94;UBERON:0001016!4.59e-52!94;UBERON:0002616!1.03e-51!59;UBERON:0000955!1.16e-48!69;UBERON:0006238!1.16e-48!69;UBERON:0002780!1.57e-47!41;UBERON:0001890!1.57e-47!41;UBERON:0006240!1.57e-47!41;UBERON:0003080!4.46e-46!42;UBERON:0003075!7.84e-45!86;UBERON:0007284!7.84e-45!86;UBERON:0002346!6.09e-42!90;UBERON:0007023!9.69e-42!115;UBERON:0002020!6.71e-40!34;UBERON:0003528!6.71e-40!34;UBERON:0001893!1.03e-39!34;UBERON:0002791!2.15e-38!33;UBERON:0001869!8.91e-38!32;UBERON:0003056!1.70e-32!61;UBERON:0002619!3.37e-28!22;UBERON:0000956!3.70e-28!25;UBERON:0000203!3.70e-28!25;UBERON:0000033!7.89e-27!123;UBERON:0004121!1.37e-26!169;UBERON:0000153!9.73e-26!129;UBERON:0007811!9.73e-26!129;UBERON:0001950!1.37e-25!20;UBERON:0000924!1.87e-25!173;UBERON:0006601!1.87e-25!173;UBERON:0003076!1.70e-16!15;UBERON:0003057!1.70e-16!15;UBERON:0002420!2.21e-13!9;UBERON:0007245!2.21e-13!9;UBERON:0010009!2.21e-13!9;UBERON:0010011!2.21e-13!9;UBERON:0000454!2.21e-13!9;UBERON:0002308!3.88e-13!9;UBERON:0000125!3.88e-13!9;UBERON:0004733!8.41e-13!12;UBERON:0002028!8.41e-13!12;UBERON:0007277!8.41e-13!12;UBERON:0004732!1.40e-11!13;UBERON:0000025!4.92e-11!194;UBERON:0009663!1.06e-10!7;UBERON:0004111!1.60e-09!241;UBERON:0000200!2.01e-09!6;UBERON:0002680!3.08e-09!9;UBERON:0001895!3.08e-09!9;UBERON:0010092!3.08e-09!9;UBERON:0001894!4.60e-09!7;UBERON:0006222!4.60e-09!7;UBERON:0001871!5.41e-09!7;UBERON:0002298!1.40e-08!8;UBERON:0000349!2.30e-08!5;UBERON:0001872!5.92e-08!5;UBERON:0002021!6.10e-08!5;UBERON:0000477!1.17e-07!286;UBERON:0000369!1.34e-07!4;UBERON:0002435!1.34e-07!4;UBERON:0000204!1.34e-07!4;UBERON:0010082!1.34e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.95e-48;32!UBERON:0003528;6.38e-48;34!UBERON:0002020;6.38e-48;34!UBERON:0002619;7.41e-46;22!UBERON:0002791;8.55e-45;32!UBERON:0001893;1.12e-44;34!UBERON:0001950;7.99e-41;20!UBERON:0000956;6.52e-40;25!UBERON:0000203;6.52e-40;25!UBERON:0000073;6.24e-35;53!UBERON:0002616;6.24e-35;53!UBERON:0002780;2.43e-34;41!UBERON:0001890;2.43e-34;41!UBERON:0000955;1.39e-25;68!UBERON:0001017;3.29e-25;75!UBERON:0001016;1.22e-19;83!UBERON:0004733;3.70e-17;12!UBERON:0002028;3.70e-17;12!UBERON:0000200;4.43e-17;6!UBERON:0002298;1.62e-16;6!UBERON:0002420;1.82e-16;9!UBERON:0007245;1.82e-16;9!UBERON:0010009;1.82e-16;9!UBERON:0010011;1.82e-16;9!UBERON:0000454;1.82e-16;9!UBERON:0000125;3.72e-16;9!UBERON:0002308;3.72e-16;9!UBERON:0004732;1.05e-15;13!UBERON:0000349;7.35e-15;5!UBERON:0001872;3.62e-14;5!UBERON:0000369;2.05e-13;4!UBERON:0002435;2.05e-13;4!UBERON:0000204;2.05e-13;4!UBERON:0009663;1.68e-11;7!UBERON:0007023;3.15e-11;114!UBERON:0002680;1.08e-10;9!UBERON:0001895;1.08e-10;9!UBERON:0005383;1.57e-10;3!UBERON:0005382;1.57e-10;3!UBERON:0001871;2.24e-10;6!UBERON:0002021;6.34e-10;5!UBERON:0000988;1.94e-09;3!UBERON:0001870;2.00e-09;3!UBERON:0001896;8.78e-09;3!UBERON:0005290;8.78e-09;3!UBERON:0011216;5.68e-08;132!UBERON:0001873;1.53e-07;2!UBERON:0001876;6.22e-07;2!UBERON:0002702;7.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.92e-68,56;UBERON:0005068,4.92e-68,56;UBERON:0006241,4.92e-68,56;UBERON:0007135,4.92e-68,56;UBERON:0000073,1.99e-64,53;UBERON:0002616,1.99e-64,53;UBERON:0003528,1.26e-54,34;UBERON:0002020,1.26e-54,34;UBERON:0001017,2.85e-54,81;UBERON:0001869,3.72e-54,32;UBERON:0000955,2.36e-53,68;UBERON:0006238,2.36e-53,68;UBERON:0001016,2.50e-53,89;UBERON:0001893,1.25e-50,34;UBERON:0002791,6.90e-50,32;UBERON:0003075,2.45e-48,82;UBERON:0007284,2.45e-48,82;UBERON:0002780,6.44e-48,41;UBERON:0001890,6.44e-48,41;UBERON:0003080,6.44e-48,41;UBERON:0006240,6.44e-48,41;UBERON:0002619,1.29e-45,22;UBERON:0002346,1.34e-45,86;UBERON:0001950,1.46e-40,20;UBERON:0000956,1.06e-39,25;UBERON:0000203,1.06e-39,25;UBERON:0007023,2.86e-36,114;UBERON:0010371,7.02e-36,104;UBERON:0003056,1.26e-34,61;UBERON:0010314,1.32e-27,132;UBERON:0004121,3.31e-25,171;UBERON:0000924,3.31e-25,171;UBERON:0006601,3.31e-25,171;UBERON:0003076,1.88e-20,15;UBERON:0003057,1.88e-20,15;UBERON:0011216,1.63e-17,223;UBERON:0004733,3.60e-17,12;UBERON:0002028,3.60e-17,12;UBERON:0007277,3.60e-17,12;UBERON:0000200,5.82e-17,6;UBERON:0002298,1.79e-16,6;UBERON:0002420,1.80e-16,9;UBERON:0007245,1.80e-16,9;UBERON:0010009,1.80e-16,9;UBERON:0010011,1.80e-16,9;UBERON:0000454,1.80e-16,9;UBERON:0000125,4.37e-16,9;UBERON:0002308,4.37e-16,9;UBERON:0004732,1.02e-15,13;UBERON:0000349,6.85e-15,5;UBERON:0001872,4.35e-14,5;UBERON:0000025,1.08e-13,192;UBERON:0000369,2.15e-13,4;UBERON:0002435,2.15e-13,4;UBERON:0000204,2.15e-13,4;UBERON:0010082,2.15e-13,4;UBERON:0009663,1.72e-11,7;UBERON:0004111,2.52e-11,240;UBERON:0002680,1.12e-10,9;UBERON:0001895,1.12e-10,9;UBERON:0010092,1.12e-10,9;UBERON:0005383,1.58e-10,3;UBERON:0005382,1.58e-10,3;UBERON:0001871,2.24e-10,6;UBERON:0002021,7.29e-10,5;UBERON:0000988,2.34e-09,3;UBERON:0001870,2.55e-09,3;UBERON:0001896,8.09e-09,3;UBERON:0005290,8.09e-09,3;UBERON:0010096,8.09e-09,3;UBERON:0001873,1.53e-07,2;UBERON:0010122,1.53e-07,2;UBERON:0001876,5.96e-07,2;UBERON:0001954,9.78e-07,2;UBERON:0002702,9.78e-07,2;UBERON:0003022,9.78e-07,2;UBERON:0002421,9.78e-07,2;UBERON:0002600,9.78e-07,2 | |||
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| ||
|short_description=p5@LAMP5 | |||
}} | }} |
Latest revision as of 17:36, 17 September 2015
Short description: | p5@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LAMP5_5end |
Coexpression cluster: | C1485_myeloma_putamen_caudate_nucleus_Dendritic_pons_Lymphatic |
Association with transcript: | 139bp_to_ENST00000427562, uc002wni.1, uc010zrc.1_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.47e-10 | 3 |