FFCP PHASE1:Hg19::chr3:2140565..2140621,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:2140565..2140621,+ to FFCP PHASE1:Hg19::chr3:2140565..2140621,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=152330 | |EntrezGene=152330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2174 | |HGNC=2174 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWV2,C9JGK9 | |UniProt=Q8IWV2,C9JGK9 | ||
|association_with_transcript=0bp_to_ENST00000418658,ENST00000455083,ENST00000490876_5end | |||
|cluster_id=chr3:2140565..2140621,+ | |||
|coexpression_cluster_id=C4320 | |||
|description=CAGE_peak_1_at_CNTN4_5end | |||
|id=chr3:2140565..2140621,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.29e-08;82!UBERON:0006215;6.94e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-59!115;UBERON:0002346!8.68e-40!90;UBERON:0001049!2.16e-39!57;UBERON:0005068!2.16e-39!57;UBERON:0006241!2.16e-39!57;UBERON:0007135!2.16e-39!57;UBERON:0005743!1.09e-37!86;UBERON:0003075!3.79e-37!86;UBERON:0007284!3.79e-37!86;UBERON:0000073!4.25e-36!94;UBERON:0001016!4.25e-36!94;UBERON:0001017!3.46e-35!82;UBERON:0002616!2.64e-32!59;UBERON:0000955!5.95e-32!69;UBERON:0006238!5.95e-32!69;UBERON:0000924!3.28e-29!173;UBERON:0006601!3.28e-29!173;UBERON:0000153!7.46e-29!129;UBERON:0007811!7.46e-29!129;UBERON:0003080!2.25e-28!42;UBERON:0003056!4.19e-28!61;UBERON:0002780!7.39e-28!41;UBERON:0001890!7.39e-28!41;UBERON:0006240!7.39e-28!41;UBERON:0000033!3.63e-27!123;UBERON:0004121!4.88e-27!169;UBERON:0001893!4.53e-25!34;UBERON:0002020!1.08e-24!34;UBERON:0003528!1.08e-24!34;UBERON:0001869!2.61e-24!32;UBERON:0002791!5.39e-24!33;UBERON:0002619!1.34e-22!22;UBERON:0001950!2.03e-21!20;UBERON:0000956!6.58e-19!25;UBERON:0000203!6.58e-19!25;UBERON:0000062!3.90e-15!511;UBERON:0000922!6.11e-14!612;UBERON:0000064!1.81e-13!219;UBERON:0000481!3.16e-12!347;UBERON:0002050!3.34e-12!605;UBERON:0005423!3.34e-12!605;UBERON:0003076!6.08e-12!15;UBERON:0003057!6.08e-12!15;UBERON:0000468!8.67e-12!659;UBERON:0000923!1.05e-11!604;UBERON:0005291!1.05e-11!604;UBERON:0006598!1.05e-11!604;UBERON:0002532!1.05e-11!604;UBERON:0004733!8.92e-10!12;UBERON:0002028!8.92e-10!12;UBERON:0007277!8.92e-10!12;UBERON:0000483!1.49e-09!309;UBERON:0000467!2.07e-09!625;UBERON:0000475!2.19e-09!365;UBERON:0000480!2.57e-09!626;UBERON:0000119!3.38e-09!312;UBERON:0000477!7.27e-09!286;UBERON:0000025!8.51e-09!194;UBERON:0004732!9.47e-09!13;UBERON:0004111!1.15e-08!241;UBERON:0001871!1.68e-08!7;UBERON:0002680!4.16e-08!9;UBERON:0001895!4.16e-08!9;UBERON:0010092!4.16e-08!9;UBERON:0000200!1.33e-07!6;UBERON:0002420!1.36e-07!9;UBERON:0007245!1.36e-07!9;UBERON:0010009!1.36e-07!9;UBERON:0010011!1.36e-07!9;UBERON:0000454!1.36e-07!9;UBERON:0002308!3.19e-07!9;UBERON:0000125!3.19e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.71e-29;20!UBERON:0002619;7.08e-29;22!UBERON:0001869;3.19e-28;32!UBERON:0002791;5.08e-26;32!UBERON:0003528;2.50e-25;34!UBERON:0002020;2.50e-25;34!UBERON:0001893;6.23e-25;34!UBERON:0000956;9.84e-25;25!UBERON:0000203;9.84e-25;25!UBERON:0002780;7.26e-20;41!UBERON:0001890;7.26e-20;41!UBERON:0000073;4.03e-18;53!UBERON:0002616;4.03e-18;53!UBERON:0000955;1.70e-15;68!UBERON:0001017;2.33e-15;75!UBERON:0000922;2.57e-13;49!UBERON:0001016;1.58e-12;83!UBERON:0007023;8.18e-12;114!UBERON:0000160;1.68e-11;17!UBERON:0000200;8.45e-11;6!UBERON:0005409;8.35e-10;22!UBERON:0002021;3.64e-09;5!UBERON:0001872;4.30e-09;5!UBERON:0001871;2.53e-08;6!UBERON:0002680;4.27e-08;9!UBERON:0001895;4.27e-08;9!UBERON:0000059;5.64e-08;11!UBERON:0011216;1.40e-07;132!UBERON:0001155;1.93e-07;9!UBERON:0004733;2.58e-07;12!UBERON:0002028;2.58e-07;12!UBERON:0002037;3.13e-07;6!UBERON:0000369;7.00e-07;4!UBERON:0002435;7.00e-07;4!UBERON:0000204;7.00e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.57e-41,114;UBERON:0001049,1.45e-34,56;UBERON:0005068,1.45e-34,56;UBERON:0006241,1.45e-34,56;UBERON:0007135,1.45e-34,56;UBERON:0000073,5.10e-33,53;UBERON:0002616,5.10e-33,53;UBERON:0001017,7.15e-32,81;UBERON:0001869,1.82e-31,32;UBERON:0000955,3.54e-31,68;UBERON:0006238,3.54e-31,68;UBERON:0002346,1.15e-30,86;UBERON:0003075,1.12e-29,82;UBERON:0007284,1.12e-29,82;UBERON:0001950,1.46e-29,20;UBERON:0001893,3.80e-29,34;UBERON:0002619,4.97e-29,22;UBERON:0002791,1.10e-28,32;UBERON:0003528,1.42e-28,34;UBERON:0002020,1.42e-28,34;UBERON:0001016,2.77e-27,89;UBERON:0002780,4.41e-27,41;UBERON:0001890,4.41e-27,41;UBERON:0003080,4.41e-27,41;UBERON:0006240,4.41e-27,41;UBERON:0000956,7.23e-25,25;UBERON:0000203,7.23e-25,25;UBERON:0010371,3.68e-24,104;UBERON:0011216,1.33e-22,223;UBERON:0003056,4.19e-22,61;UBERON:0010314,6.37e-20,132;UBERON:0004121,2.56e-19,171;UBERON:0000924,2.56e-19,171;UBERON:0006601,2.56e-19,171;UBERON:0000160,1.00e-11,17;UBERON:0000200,7.01e-11,6;UBERON:0005409,6.44e-10,25;UBERON:0002021,3.48e-09,5;UBERON:0001872,3.73e-09,5;UBERON:0003076,1.30e-08,15;UBERON:0003057,1.30e-08,15;UBERON:0000922,1.89e-08,592;UBERON:0001871,2.44e-08,6;UBERON:0002050,3.73e-08,564;UBERON:0005423,4.45e-08,581;UBERON:0000059,5.08e-08,11;UBERON:0002680,5.46e-08,9;UBERON:0001895,5.46e-08,9;UBERON:0010092,5.46e-08,9;UBERON:0000923,7.16e-08,560;UBERON:0010316,7.16e-08,560;UBERON:0005291,7.16e-08,560;UBERON:0006598,7.16e-08,560;UBERON:0010317,7.16e-08,560;UBERON:0002532,7.16e-08,560;UBERON:0000025,9.13e-08,192;UBERON:0001155,1.71e-07,9;UBERON:0000483,2.27e-07,306;UBERON:0004733,3.53e-07,12;UBERON:0002028,3.53e-07,12;UBERON:0007277,3.53e-07,12;UBERON:0004111,3.59e-07,240;UBERON:0000119,3.78e-07,309;UBERON:0002037,4.18e-07,6;UBERON:0006215,4.18e-07,6;UBERON:0000369,6.76e-07,4;UBERON:0002435,6.76e-07,4;UBERON:0000204,6.76e-07,4;UBERON:0010082,6.76e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10808952269109,0.204000691244253,1.25381888591235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,2.21729397462564,0.87834785693126,2.29213382120997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.336672227908132,0.375355559615893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0.397589304964456,0.116193942869518,0.725627385107593,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,1.85488647960123,1.05667824812239,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.571652865261156,0,0,0,0,0,0,3.72313363218819,4.16029747645464,0,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,7.8083912314573,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05461064305758,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0.984043937099117,0.650756789328606,1.13345112812495,2.65551447973196,2.88783249722058,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899362287916574,1.37268514868027,1.41374882814824,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0.403599414382095,0,0,0.921722292925374,1.11838053946208,0.834245708559542,0,0,0,0,0,1.4098700508785,0,1.17206543417515,0,0,0,0,0,0,0.994147647766298,3.37606599385231,0,0,0,17.9323189425963,1.38141957765574,0,0,0,0,0,0.716084698702437,0.511572370226872,1.08507746200627,0,0,6.78532922266653,2.78304294485554,5.98841394003583,0,0.262379999988587,0.724999575434793,0,0,0,2.06846023944879,0.874813840149763,0,2.65722415744152,2.29133233388275,13.7323562685375,12.0531393325035,10.0486190444206,2.63262476584767,0,0,3.46276163267087,0,0,0.269272933229316,6.30154757147647,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,2.26164914294305,0,2.98578579323551,2.12298154808014,4.888241159469,0,0,0,0.471807930864739,1.60515529459758,0.468528891450678,0,0,0,0.789168805698781,6.04953580243319,1.53036380815245,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,3.84398670132466,0,0,0,0,1.74580229679155,8.91386879584153,4.06765333404958,0,0,5.0648636764703,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0.279282401272254,5.27068975226872,0,0,0.429226048136571,0.223171457441873,3.02325626190268,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0.412618309791701,0,0,0,6.07495566580247,0,1.89133697518076,4.03900328639485,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.732761168390412,1.32506888912221,0.646414781807753,1.19009341568421,0,0,0.854299300541557,3.93010762749165,2.48543433208317,1.9846640872478,0,0,0,0,0.2506898940227,0,0,0,5.31640907980192,4.88105059607853,4.38168257472749,1.14681839138014,0.776503360757966,0.993542447062135,3.45871587340577,0,0.303298235083296,0,0,2.34167452903441,4.20270982971393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0.157265941855896,0.327628914576042,1.01839517972415,5.52694792264376,0.991486114072017,0.558644917973244,0,0,0,2.46873160583479,3.9811912055916,4.81719188223446,8.5017945795351,3.19267718114303,2.87162909937057,20.1657356977374,3.59617712813933,3.22951291263702,0,0,0,0,0,0,2.0710797781803,4.97290555290687,1.12815492523886,0,0.781514011233092,0,0,0,7.36159672340502,2.34323429584154,3.9270491335225,4.56593833396129,12.580420607419,0.548257766857182,2.97726707033577,0.175871244359621,0,3.74991285114801,0.336283722218824,0,5.69155478378244,0.443511850813194,0,0,1.69924332442079,4.27523028158519,0,0,2.98273752831953,2.19961825882403,0,7.30526976407596,0,0,4.28859265059938,1.73814972905999,0,0,1.60342272946051,0,0,0,0,0,0,3.38709640152743,1.3746412112643,0,0.955538938977433,0,0,0,0.647428837187895,0.615976841137482,1.1598144313382,1.94284397223656,0.935757853848423,0,0,0,0.989464650708862,3.77407108916684,1.85217979459067,1.74847648403166,0,3.43207650455468,0,1.17785080268967,0.891139200981258,5.0718687310008,0,0.281951753939561,3.6740996144939,0,0,0,0,2.19100916473955,0.458729283404541,0.286679166302903,0,3.12760854878208,1.74540276136151,2.1161073620616,0,0,0,0.126166424835079,0,0,0,0,0.36757959813938,0,0.682008283964155,0.535928260312357,0.829169439458779,0.72403097103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| ||
|short_description=p1@CNTN4 | |||
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Latest revision as of 18:40, 17 September 2015
Short description: | p1@CNTN4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNTN4_5end |
Coexpression cluster: | C4320_cerebellum_occipital_aorta_parietal_rectum_extraskeletal_brain |
Association with transcript: | 0bp_to_ENST00000418658, ENST00000455083, ENST00000490876_5end |
EntrezGene: | CNTN4 |
HGNC: | 2174 |
UniProt: | Q8IWV2C9JGK9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data