FFCP PHASE1:Hg19::chr5:132166402..132166413,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:132166402..132166413,- to FFCP PHASE1:Hg19::chr5:132166402..132166413,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=134549 | |EntrezGene=134549 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24084 | |HGNC=24084 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXU1 | |UniProt=C9JXU1 | ||
|association_with_transcript=-51bp_to_ENST00000440118_5end | |||
|cluster_id=chr5:132166402..132166413,- | |||
|description=CAGE_peak_5_at_SHROOM1_5end | |||
|id=chr5:132166402..132166413,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;7.82e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,8.21e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.93e-21;3!UBERON:0005425;1.65e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.17e-20!115;UBERON:0001049!6.41e-19!57;UBERON:0005068!6.41e-19!57;UBERON:0006241!6.41e-19!57;UBERON:0007135!6.41e-19!57;UBERON:0002616!1.67e-16!59;UBERON:0000955!2.05e-16!69;UBERON:0006238!2.05e-16!69;UBERON:0001017!1.02e-14!82;UBERON:0003075!1.12e-14!86;UBERON:0007284!1.12e-14!86;UBERON:0005743!6.38e-14!86;UBERON:0000073!1.62e-13!94;UBERON:0001016!1.62e-13!94;UBERON:0002346!5.30e-13!90;UBERON:0003080!8.32e-13!42;UBERON:0002780!2.98e-12!41;UBERON:0001890!2.98e-12!41;UBERON:0006240!2.98e-12!41;UBERON:0004111!1.01e-10!241;UBERON:0000477!1.36e-10!286;UBERON:0000033!1.39e-10!123;UBERON:0000025!2.47e-10!194;UBERON:0003056!3.36e-10!61;UBERON:0001893!8.59e-10!34;UBERON:0002020!1.33e-09!34;UBERON:0003528!1.33e-09!34;UBERON:0000153!2.08e-09!129;UBERON:0007811!2.08e-09!129;UBERON:0002791!2.50e-09!33;UBERON:0000467!1.61e-08!625;UBERON:0001869!1.69e-08!32;UBERON:0000480!2.19e-08!626;UBERON:0004121!3.34e-08!169;UBERON:0003076!1.48e-07!15;UBERON:0003057!1.48e-07!15;UBERON:0000475!1.88e-07!365;UBERON:0000924!1.91e-07!173;UBERON:0006601!1.91e-07!173;UBERON:0000468!2.84e-07!659;UBERON:0000062!5.80e-07!511;UBERON:0002298!9.11e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.14e-22;53!UBERON:0002616;7.14e-22;53!UBERON:0004732;1.53e-18;13!UBERON:0002784;1.44e-15;4!UBERON:0005162;3.20e-15;2!UBERON:0000122;3.20e-15;2!UBERON:0001897;2.68e-14;2!UBERON:0010225;2.68e-14;2!UBERON:0004733;4.57e-14;12!UBERON:0002028;4.57e-14;12!UBERON:0002780;6.62e-14;41!UBERON:0001890;6.62e-14;41!UBERON:0000955;1.45e-13;68!UBERON:0001872;1.45e-12;5!UBERON:0002037;5.44e-11;6!UBERON:0001016;9.61e-11;83!UBERON:0001017;2.41e-10;75!UBERON:0002619;6.52e-10;22!UBERON:0001896;7.82e-10;3!UBERON:0005290;7.82e-10;3!UBERON:0001893;2.37e-09;34!UBERON:0001894;4.05e-09;7!UBERON:0000956;1.04e-08;25!UBERON:0000203;1.04e-08;25!UBERON:0000941;1.65e-08;1!UBERON:0001785;1.65e-08;1!UBERON:0002464;1.65e-08;1!UBERON:0004904;1.65e-08;1!UBERON:0001021;1.65e-08;1!UBERON:0002336;2.04e-08;1!UBERON:0011215;2.04e-08;1!UBERON:0001018;2.04e-08;1!UBERON:0002473;2.04e-08;1!UBERON:0005340;2.04e-08;1!UBERON:0003544;2.04e-08;1!UBERON:0005970;2.04e-08;1!UBERON:0002316;2.04e-08;1!UBERON:0001020;2.04e-08;1!UBERON:0002437;2.04e-08;1!UBERON:0002038;5.39e-08;1!UBERON:0009661;5.39e-08;1!UBERON:0002950;5.39e-08;1!UBERON:0001891;5.39e-08;1!UBERON:0001950;9.48e-08;20!UBERON:0003528;1.45e-07;34!UBERON:0002020;1.45e-07;34!UBERON:0002680;1.78e-07;9!UBERON:0001895;1.78e-07;9!UBERON:0002791;2.37e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.53e-29,53;UBERON:0002616,9.53e-29,53;UBERON:0000955,1.51e-27,68;UBERON:0006238,1.51e-27,68;UBERON:0001049,4.56e-27,56;UBERON:0005068,4.56e-27,56;UBERON:0006241,4.56e-27,56;UBERON:0007135,4.56e-27,56;UBERON:0003075,1.02e-22,82;UBERON:0007284,1.02e-22,82;UBERON:0001016,1.04e-22,89;UBERON:0001017,1.13e-22,81;UBERON:0002346,1.66e-21,86;UBERON:0010371,2.08e-19,104;UBERON:0004732,2.23e-18,13;UBERON:0002780,1.82e-17,41;UBERON:0001890,1.82e-17,41;UBERON:0003080,1.82e-17,41;UBERON:0006240,1.82e-17,41;UBERON:0003056,6.81e-16,61;UBERON:0002784,1.02e-15,4;UBERON:0007023,1.27e-15,114;UBERON:0005162,3.00e-15,2;UBERON:0000122,3.00e-15,2;UBERON:0001897,1.20e-14,2;UBERON:0010225,1.20e-14,2;UBERON:0010314,1.59e-14,132;UBERON:0004121,1.79e-14,171;UBERON:0000924,1.79e-14,171;UBERON:0006601,1.79e-14,171;UBERON:0004733,6.39e-14,12;UBERON:0002028,6.39e-14,12;UBERON:0007277,6.39e-14,12;UBERON:0001872,1.78e-12,5;UBERON:0001893,2.81e-11,34;UBERON:0003076,4.24e-11,15;UBERON:0003057,4.24e-11,15;UBERON:0002037,6.25e-11,6;UBERON:0006215,6.25e-11,6;UBERON:0002619,4.95e-10,22;UBERON:0001896,1.12e-09,3;UBERON:0005290,1.12e-09,3;UBERON:0010096,1.12e-09,3;UBERON:0001894,3.34e-09,7;UBERON:0006222,3.34e-09,7;UBERON:0002791,3.35e-09,32;UBERON:0000956,8.20e-09,25;UBERON:0000203,8.20e-09,25;UBERON:0003528,1.26e-08,34;UBERON:0002020,1.26e-08,34;UBERON:0000941,1.65e-08,1;UBERON:0001785,1.65e-08,1;UBERON:0002464,1.65e-08,1;UBERON:0004904,1.65e-08,1;UBERON:0001021,1.65e-08,1;UBERON:0003902,1.65e-08,1;UBERON:0005425,1.65e-08,1;UBERON:0002336,1.91e-08,1;UBERON:0011215,1.91e-08,1;UBERON:0001018,1.91e-08,1;UBERON:0002473,1.91e-08,1;UBERON:0005340,1.91e-08,1;UBERON:0003544,1.91e-08,1;UBERON:0005970,1.91e-08,1;UBERON:0002316,1.91e-08,1;UBERON:0001020,1.91e-08,1;UBERON:0002437,1.91e-08,1;UBERON:0002038,2.71e-08,1;UBERON:0009661,2.71e-08,1;UBERON:0002950,2.71e-08,1;UBERON:0001891,2.71e-08,1;UBERON:0009616,2.71e-08,1;UBERON:0010286,2.71e-08,1;UBERON:0011216,5.81e-08,223;UBERON:0001950,8.70e-08,20;UBERON:0000025,9.48e-08,192;UBERON:0002680,1.95e-07,9;UBERON:0001895,1.95e-07,9;UBERON:0010092,1.95e-07,9;UBERON:0001869,7.93e-07,32 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0.527533956456907,0.123766352960047,0,0,1.20538905604795,0,0,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0.305653622991805,0.0821005894499457,0.157421562627358,0.786728553697808,0,0,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0,0.581592955118259,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.300353785683013,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.196468613246569,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0,0.838998872419812,0,0,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0.549605231791222,0,0,0,0,0,0.794455084879313,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0.413303124703062,1.18800285728205,0,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0,0,0.300476117813194,0.226864366320042,0,0.640672166455702,0.211931901159562,0.300091096084402,0.206105058476878,0.772921620136887,0.18611685633159,0.337552664482532,0,0.252433774244115,0.276149695926898,0.323292113637624,0,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0,0.721879481669586,0.236613600079688,0,0,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0.8231480226628,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,1.03993478527958,0,0.115930404975077,0.117408694235822,0.433099343283221,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0,0.44024217006613,0.207328115540772,1.29707958075265,0.50496973370552,0.190493682876507,1.14596527667483,1.17217447210047,0,0.205654985406647,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0.315404830067869,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0.587403472388222,0.343143423810856,0,0,0.320182673410333,0,0,0,0,0.61384789315225,0.280660094433074,0.128139149255701,0,0,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.247528499761764,0,0,0,0,0.308097234229289,0.307007349452259,0,0,0,0,0,0,0.192190067365106,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0.974853958525138,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0.845086807596724,0.143411352204052,0.196498082026242,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,0.470719003883896,0,0,0.443430153536676,0,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.568272293612826,0.23874448473769,0,0,0,1.40669416410513,0,0,0.422250816255987,0,0.552567831062295,0,0.20453736500431,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.02044907978036,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0.173624994933292,0.885741385813839,0.964771509003264,3.05163472634166,1.10579259931225,2.06883333267483,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0.335643173951685,0.37950746544837,0,0,0.163232808159148,0,0,0,0.442287822516696,0,0.296521128680622,0,0.104421949505455,2.96564985114979,0,0.468528891450678,0,0,0.485560759068186,0.789168805698781,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0.347119476670262,0.195984794828755,0,0.34945333648406,0.171986032471617,0,0,0.246346371159628,0.0969890164884194,0.529536760149002,0,0.274083849293502,0.397429223405979,0.443175571691151,0,0,0,0,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|short_description=p5@SHROOM1 | |||
}} | }} |
Latest revision as of 06:22, 20 September 2015
Short description: | p5@SHROOM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SHROOM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -51bp_to_ENST00000440118_5end |
EntrezGene: | SHROOM1 |
HGNC: | 24084 |
UniProt: | C9JXU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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light melanocyte | 8.21e-10 | 3 |