FFCP PHASE1:Hg19::chr5:146833222..146833261,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:146833222..146833261,- to FFCP PHASE1:Hg19::chr5:146833222..146833261,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1809 | |EntrezGene=1809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |HGNC=3015 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWI3,Q14195,Q8IXW6 | |UniProt=F5GWI3,Q14195,Q8IXW6 | ||
|association_with_transcript=0bp_to_ENST00000507309,ENST00000519672,ENST00000534907,NM_001387,uc003lon.1_5end | |||
|cluster_id=chr5:146833222..146833261,- | |||
|coexpression_cluster_id=C1954 | |||
|description=CAGE_peak_1_at_DPYSL3_5end | |||
|id=chr5:146833222..146833261,- | |||
|ontology_enrichment_celltype=CL:0000055!5.30e-13!180;CL:0000359!4.36e-11!32;CL:0002319!6.02e-10!25;CL:0000393!1.41e-09!60;CL:0000211!1.41e-09!60;CL:0000192!2.95e-09!42;CL:0000514!2.95e-09!42;CL:0000133!3.52e-09!59;CL:0000183!3.23e-07!59;CL:0000187!6.04e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.62e-10;32!CL:0002319;2.27e-09;25!CL:0000192;9.91e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.20e-11,32;CL:0002319,1.88e-09,25;CL:0000192,6.49e-09,43;CL:0000514,6.49e-09,43;CL:0000133,7.25e-09,59;CL:0000393,1.66e-08,61;CL:0000211,1.66e-08,61;CL:0000047,7.60e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000514;9.91e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.63e-27!82;UBERON:0005743!6.40e-27!86;UBERON:0000073!3.29e-26!94;UBERON:0001016!3.29e-26!94;UBERON:0000468!5.21e-25!659;UBERON:0000025!3.30e-24!194;UBERON:0003075!4.24e-23!86;UBERON:0007284!4.24e-23!86;UBERON:0004121!5.36e-23!169;UBERON:0004111!2.29e-22!241;UBERON:0000924!1.65e-21!173;UBERON:0006601!1.65e-21!173;UBERON:0000922!2.08e-21!612;UBERON:0002346!8.25e-21!90;UBERON:0000477!2.95e-20!286;UBERON:0000480!6.56e-20!626;UBERON:0000955!8.80e-20!69;UBERON:0006238!8.80e-20!69;UBERON:0000483!1.21e-19!309;UBERON:0000467!1.29e-19!625;UBERON:0000119!3.05e-19!312;UBERON:0001049!5.21e-19!57;UBERON:0005068!5.21e-19!57;UBERON:0006241!5.21e-19!57;UBERON:0007135!5.21e-19!57;UBERON:0002050!3.82e-18!605;UBERON:0005423!3.82e-18!605;UBERON:0007023!5.66e-18!115;UBERON:0000923!8.71e-18!604;UBERON:0005291!8.71e-18!604;UBERON:0006598!8.71e-18!604;UBERON:0002532!8.71e-18!604;UBERON:0004872!3.04e-17!84;UBERON:0002616!4.52e-17!59;UBERON:0000033!4.04e-16!123;UBERON:0000475!1.62e-15!365;UBERON:0000153!3.25e-15!129;UBERON:0007811!3.25e-15!129;UBERON:0003056!1.19e-14!61;UBERON:0000481!3.70e-14!347;UBERON:0001637!4.52e-14!42;UBERON:0003509!4.52e-14!42;UBERON:0004572!4.52e-14!42;UBERON:0001981!1.55e-13!60;UBERON:0007500!1.55e-13!60;UBERON:0004537!1.55e-13!60;UBERON:0006965!1.55e-13!60;UBERON:0003080!2.28e-13!42;UBERON:0002780!2.80e-13!41;UBERON:0001890!2.80e-13!41;UBERON:0006240!2.80e-13!41;UBERON:0002049!4.72e-13!79;UBERON:0007798!4.72e-13!79;UBERON:0002020!2.44e-12!34;UBERON:0003528!2.44e-12!34;UBERON:0001893!6.55e-12!34;UBERON:0002791!8.33e-12!33;UBERON:0000055!1.47e-11!69;UBERON:0001869!2.76e-11!32;UBERON:0004573!4.66e-11!33;UBERON:0004571!4.66e-11!33;UBERON:0003914!6.79e-11!118;UBERON:0000062!2.81e-10!511;UBERON:0000064!5.46e-10!219;UBERON:0001009!1.55e-09!113;UBERON:0004535!2.12e-09!110;UBERON:0000956!4.79e-09!25;UBERON:0000203!4.79e-09!25;UBERON:0002385!4.00e-08!63;UBERON:0001015!4.00e-08!63;UBERON:0000383!4.00e-08!63;UBERON:0000948!1.14e-07!24;UBERON:0005498!1.14e-07!24;UBERON:0004140!1.14e-07!24;UBERON:0009881!1.14e-07!24;UBERON:0004141!1.14e-07!24;UBERON:0003084!1.14e-07!24;UBERON:0007005!1.14e-07!24;UBERON:0004139!1.14e-07!24;UBERON:0004291!1.14e-07!24;UBERON:0001134!1.26e-07!61;UBERON:0002036!1.26e-07!61;UBERON:0003082!1.26e-07!61;UBERON:0000947!1.43e-07!21;UBERON:0010191!1.43e-07!21;UBERON:0007100!1.54e-07!27;UBERON:0002619!1.78e-07!22;UBERON:0003076!5.45e-07!15;UBERON:0003057!5.45e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.28e-11;34!UBERON:0002020;3.28e-11;34!UBERON:0002791;4.36e-11;32!UBERON:0001869;6.68e-11;32!UBERON:0000073;9.41e-11;53!UBERON:0002616;9.41e-11;53!UBERON:0001893;9.54e-11;34!UBERON:0001637;1.16e-10;42!UBERON:0003509;1.16e-10;42!UBERON:0004572;1.16e-10;42!UBERON:0002780;1.66e-10;41!UBERON:0001890;1.66e-10;41!UBERON:0004573;1.86e-10;33!UBERON:0004571;1.86e-10;33!UBERON:0001017;6.69e-10;75!UBERON:0000956;1.89e-09;25!UBERON:0000203;1.89e-09;25!UBERON:0000955;2.97e-09;68!UBERON:0001016;4.22e-09;83!UBERON:0000947;7.18e-08;21!UBERON:0010191;7.18e-08;21!UBERON:0002619;8.47e-08;22!UBERON:0000948;3.19e-07;22!UBERON:0007100;4.20e-07;25!UBERON:0001950;5.26e-07;20!UBERON:0007500;5.95e-07;56!UBERON:0001981;5.95e-07;56!UBERON:0004537;5.95e-07;56 | |||
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|phase1_expression=5.63202975738726,4.49611100171065,13.2497139850213,15.0109947529696,40.6734595928832,70.6594204521299,12.6649939084155,1.89515962028049,0.261185628199839,1.47440361900905,0.697801167972428,8.30077214094655,12.3970479767373,13.6142988256051,9.94192127183747,56.4753123019491,65.6937035546135,60.615737502152,51.7208766717937,23.0236378603593,11.4240387096782,118.485884718717,98.7514155602146,50.9172861271129,56.3686451780665,0,0,0,0,0,1.39334510984468,0,0.30120591877825,0,0,0,0.880801318004542,0.553995408531877,1.20326668482085,0.434021741431704,0,0,0,1.01778767145695,1.88937971844405,1.94067248950253,2.09186133215116,4.11167888021826,3.40677007984614,0.575384784644301,1.7931249457037,0.945928919554341,0.689491361473237,1.93645405075148,0,0.941211697713023,4.09359225086769,2.69668181334102,0.918251677112708,1.92557416245656,1.91801137739712,0.989553900560148,1.99463657621632,2.13112375266347,0.290209238628584,0.56738522469114,0.622822248995575,1.25624332628372,1.0429658368404,1.52032191293582,1.81619850790011,0,0.316462387440884,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,4.48406850385229,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,7.37770945674,12.530531060666,2.89151321907653,7.01873074890245,7.53201898596283,12.7245751528176,15.0856809793817,69.0104165297695,72.5055129702584,91.4360119065442,15.4555309087301,0,0,0,0.174129737299267,0.26591592103773,0,0,0,9.93812036833526,12.0432843314857,6.2485290289367,10.7408508965562,14.6824802673467,4.67700671298115,9.8227634272301,0.516833518338658,0.35576626268671,2.67776490211736,2.01414658554573,3.04108842287405,1.95249646038536,3.30896772311282,21.8738325928075,1.25019619597712,0.898117490504679,1.12611480483322,4.5994991239765,4.74632829784064,4.39684185432977,0,0,0,27.3334573432425,28.7451261478596,18.8021036754771,44.1728395953173,23.0534448428932,29.1552352074,51.2395179502584,54.020193103358,6.53543174339509,19.3983367780351,13.7307998615305,4.23800797405808,8.06646294271999,3.98346434117454,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0,1.42907919878425,1.71968044236475,3.92637968467909,13.0680314301026,12.1160795346493,0.910161361938026,0.718618141816238,1.85169725349473,0.500474079487857,1.38532057742091,6.14568669233173,4.90380473278431,10.6669021823684,39.1341031902073,4.12596162084383,5.55249210928275,2.96704661623387,7.20218630602566,5.46178404963726,10.0479810617795,5.02515512095292,2.86919764810153,5.16416127354353,5.80597680761463,3.03764665519588,11.4768700341356,5.32514388774922,4.93685281315437,5.25637836162512,1.35282597214308,1.09098448236334,0,41.593033790192,75.1443786382821,52.5196621770223,41.0497777860867,59.5477208066483,153.290490811849,15.6449532329816,14.1513006402435,6.90674606762403,4.64367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,2.95262181849859,0,42.8036971784656,60.2735716680722,0,0,1.18157981336281,0,4.18160691046586,16.642077598957,0,0,0.100528972411631,0,2.6064664424826,2.07986957055916,11.5465073620219,102.598408402943,123.748763724556,0.577465791044295,0.925971025153221,1.33177906564219,0,0,0,1.8720341211139,0.743155811443641,0,0.335964256397719,0.425325291727159,0,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0.288239906833923,0.37872730027914,0,0,0,5.13217338068116,0.205654985406647,0,0.285826432630578,0.112131084345361,2.61576041299968,0.2933531432838,38.6522430115755,0,0,40.1566556043154,20.8014873822732,0,0,0.266422179016099,2.57360388584666,0.542621605391443,12.3486050517115,0,2.13235169245527,5.543663110534,12.359014459443,40.0905390956135,57.5844429208649,1.2162378064119,0,0,14.8567410404781,27.5668646001873,1.42636905040718,0.723906533337896,1.2328579353023,1.07436577943937,0,0,0,0,61.7449936860586,157.469223167722,125.272787669987,211.740559382617,100.156384009547,0,0,0,9.81531933753119,9.50323990013386,3.25518028439683,11.0224556611328,5.17444067511769,3.6271555457805,7.9656162195045,10.5331134904702,22.7407504055985,17.5904221197258,4.64957918974806,6.82165923604302,6.16873662723388,0.783204629850962,2.05886054286514,0,0,0,8.48757200049526,9.98612637062982,7.25736703991233,3.2254015016441,11.6631099698927,8.41980283299221,7.43207065683066,12.7926812266676,34.2618852035884,44.5254199334973,2.62156479464514,2.84098760501003,2.05317890034523,2.59627214591811,1.27831416305955,3.50492403815704,3.80962293576241,0,6.08516575272416,5.09855270418808,8.91646021724084,3.15839729035188,2.0794141018192,3.92174884588428,8.76835347919564,4.64427167128653,1.13733384070897,2.38131187387122,11.4435435534134,4.62681758070868,36.0358761933324,34.6165943959849,0.509752546090077,1.66215201785745,2.23874754722178,0,0,0.256450125116389,20.3369080333818,1.62689197332152,5.25509159403384,1.19040304263846,1.65018999841176,0,0.650060246036521,49.8120182516895,0.290012154876366,0.154048617114644,0.460511024178389,0,0.107420244868274,0.145016693914229,0.767039646744908,3.20515328328254,0.49585474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| ||
|short_description=p1@DPYSL3 | |||
}} | }} |
Latest revision as of 22:05, 15 September 2015
Short description: | p1@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DPYSL3_5end |
Coexpression cluster: | C1954_occipital_parietal_temporal_duodenum_brain_Neurons_medulloblastoma |
Association with transcript: | 0bp_to_ENST00000507309, ENST00000519672, ENST00000534907, NM_001387, uc003lon.1_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | F5GWI3Q14195Q8IXW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.20e-11 | 32 |
neural cell | 1.88e-09 | 25 |
smooth muscle cell | 6.49e-09 | 43 |
smooth muscle myoblast | 6.49e-09 | 43 |
neurectodermal cell | 7.25e-09 | 59 |
electrically responsive cell | 1.66e-08 | 61 |
electrically active cell | 1.66e-08 | 61 |
neuronal stem cell | 7.60e-07 | 8 |