FFCP PHASE1:Hg19::chr9:73736417..73736430,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:73736417..73736430,- to FFCP PHASE1:Hg19::chr9:73736417..73736430,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80036 | |EntrezGene=80036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17992 | |HGNC=17992 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCF6 | |UniProt=Q9HCF6 | ||
|association_with_transcript=83bp_to_ENST00000377110,ENST00000377111,NM_001007471,uc004aic.2,uc004aid.2,uc010mor.2_5end | |||
|cluster_id=chr9:73736417..73736430,- | |||
|coexpression_cluster_id=C335 | |||
|description=CAGE_peak_8_at_TRPM3_5end | |||
|id=chr9:73736417..73736430,- | |||
|ontology_enrichment_celltype=CL:0002322!1.74e-13!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.07e-20;3!UBERON:0006241;2.13e-19;3!UBERON:0003057;2.13e-19;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.77e-88!57;UBERON:0005068!1.77e-88!57;UBERON:0006241!1.77e-88!57;UBERON:0007135!1.77e-88!57;UBERON:0001017!1.10e-82!82;UBERON:0005743!1.94e-81!86;UBERON:0000073!1.23e-72!94;UBERON:0001016!1.23e-72!94;UBERON:0002616!1.28e-72!59;UBERON:0000955!6.65e-70!69;UBERON:0006238!6.65e-70!69;UBERON:0002780!4.72e-67!41;UBERON:0001890!4.72e-67!41;UBERON:0006240!4.72e-67!41;UBERON:0003080!2.84e-65!42;UBERON:0003075!3.12e-63!86;UBERON:0007284!3.12e-63!86;UBERON:0002020!5.96e-63!34;UBERON:0003528!5.96e-63!34;UBERON:0001893!1.58e-62!34;UBERON:0002791!5.13e-60!33;UBERON:0002346!6.64e-60!90;UBERON:0001869!9.96e-58!32;UBERON:0002619!5.19e-47!22;UBERON:0003056!4.41e-45!61;UBERON:0007023!4.26e-44!115;UBERON:0001950!1.83e-41!20;UBERON:0000956!6.34e-41!25;UBERON:0000203!6.34e-41!25;UBERON:0004121!5.44e-40!169;UBERON:0000924!9.06e-39!173;UBERON:0006601!9.06e-39!173;UBERON:0000033!2.59e-38!123;UBERON:0000153!5.31e-36!129;UBERON:0007811!5.31e-36!129;UBERON:0002308!8.38e-24!9;UBERON:0000125!8.38e-24!9;UBERON:0003076!4.88e-23!15;UBERON:0003057!4.88e-23!15;UBERON:0000025!2.72e-20!194;UBERON:0002420!1.13e-18!9;UBERON:0007245!1.13e-18!9;UBERON:0010009!1.13e-18!9;UBERON:0010011!1.13e-18!9;UBERON:0000454!1.13e-18!9;UBERON:0009663!1.65e-18!7;UBERON:0000200!7.95e-17!6;UBERON:0004733!1.61e-15!12;UBERON:0002028!1.61e-15!12;UBERON:0007277!1.61e-15!12;UBERON:0001872!1.81e-14!5;UBERON:0004732!3.33e-14!13;UBERON:0004111!4.27e-14!241;UBERON:0002298!5.05e-13!8;UBERON:0001871!5.74e-13!7;UBERON:0002680!3.64e-12!9;UBERON:0001895!3.64e-12!9;UBERON:0010092!3.64e-12!9;UBERON:0000483!6.72e-12!309;UBERON:0000119!1.14e-11!312;UBERON:0000369!4.50e-11!4;UBERON:0002435!4.50e-11!4;UBERON:0000204!4.50e-11!4;UBERON:0010082!4.50e-11!4;UBERON:0000064!6.63e-11!219;UBERON:0000477!7.25e-11!286;UBERON:0002021!4.19e-10!5;UBERON:0002240!4.97e-10!3;UBERON:0000988!8.23e-10!3;UBERON:0000349!8.96e-10!5;UBERON:0002771!1.31e-09!3;UBERON:0000475!1.44e-09!365;UBERON:0006331!2.09e-09!3;UBERON:0005383!7.87e-09!3;UBERON:0005382!7.87e-09!3;UBERON:0001954!2.66e-07!2;UBERON:0003022!2.66e-07!2;UBERON:0002421!2.66e-07!2;UBERON:0002600!2.66e-07!2;UBERON:0002148!5.45e-07!2;UBERON:0009662!5.45e-07!2;UBERON:0001897!7.53e-07!2;UBERON:0001894!7.95e-07!7;UBERON:0006222!7.95e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.73e-43;22!UBERON:0000073;2.64e-39;53!UBERON:0002616;2.64e-39;53!UBERON:0000956;3.49e-38;25!UBERON:0000203;3.49e-38;25!UBERON:0003528;8.89e-35;34!UBERON:0002020;8.89e-35;34!UBERON:0001950;4.28e-34;20!UBERON:0004733;1.27e-32;12!UBERON:0002028;1.27e-32;12!UBERON:0004732;4.96e-30;13!UBERON:0002791;1.85e-29;32!UBERON:0001869;2.58e-29;32!UBERON:0002780;1.54e-27;41!UBERON:0001890;1.54e-27;41!UBERON:0001893;6.00e-27;34!UBERON:0002298;1.85e-25;6!UBERON:0002680;3.82e-25;9!UBERON:0001895;3.82e-25;9!UBERON:0001016;2.31e-24;83!UBERON:0000955;2.38e-21;68!UBERON:0001017;1.70e-20;75!UBERON:0002240;2.13e-19;3!UBERON:0005174;2.13e-19;3!UBERON:0001137;2.13e-19;3!UBERON:0000988;4.66e-19;3!UBERON:0001871;1.62e-14;6!UBERON:0001954;1.23e-13;2!UBERON:0003022;1.23e-13;2!UBERON:0002421;1.23e-13;2!UBERON:0002600;1.23e-13;2!UBERON:0002771;2.70e-13;2!UBERON:0002148;2.70e-13;2!UBERON:0006331;2.70e-13;2!UBERON:0009662;2.70e-13;2!UBERON:0001872;4.57e-12;5!UBERON:0002021;5.72e-12;5!UBERON:0000349;7.29e-12;5!UBERON:0002037;1.33e-10;6!UBERON:0001896;3.68e-09;3!UBERON:0005290;3.68e-09;3!UBERON:0007023;1.29e-08;114!UBERON:0011216;4.44e-08;132!UBERON:0002022;1.74e-07;1!UBERON:0002784;4.47e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.38e-75,56;UBERON:0005068,3.38e-75,56;UBERON:0006241,3.38e-75,56;UBERON:0007135,3.38e-75,56;UBERON:0000073,3.30e-62,53;UBERON:0002616,3.30e-62,53;UBERON:0001017,2.53e-54,81;UBERON:0000955,2.40e-51,68;UBERON:0006238,2.40e-51,68;UBERON:0003075,4.13e-50,82;UBERON:0007284,4.13e-50,82;UBERON:0003076,7.89e-49,15;UBERON:0003057,7.89e-49,15;UBERON:0001016,1.61e-48,89;UBERON:0002346,1.40e-47,86;UBERON:0002619,1.25e-43,22;UBERON:0003528,2.76e-42,34;UBERON:0002020,2.76e-42,34;UBERON:0010371,1.43e-38,104;UBERON:0000956,2.62e-38,25;UBERON:0000203,2.62e-38,25;UBERON:0002780,7.99e-35,41;UBERON:0001890,7.99e-35,41;UBERON:0003080,7.99e-35,41;UBERON:0006240,7.99e-35,41;UBERON:0002791,2.14e-34,32;UBERON:0001869,2.14e-34,32;UBERON:0001950,3.55e-34,20;UBERON:0004733,1.28e-32,12;UBERON:0002028,1.28e-32,12;UBERON:0007277,1.28e-32,12;UBERON:0001893,2.85e-32,34;UBERON:0004732,5.00e-30,13;UBERON:0010314,2.14e-29,132;UBERON:0002298,1.81e-25,6;UBERON:0002680,4.01e-25,9;UBERON:0001895,4.01e-25,9;UBERON:0010092,4.01e-25,9;UBERON:0007023,2.35e-24,114;UBERON:0004121,3.01e-23,171;UBERON:0000924,3.01e-23,171;UBERON:0006601,3.01e-23,171;UBERON:0003056,1.53e-22,61;UBERON:0002240,1.66e-19,3;UBERON:0005174,1.66e-19,3;UBERON:0001137,1.66e-19,3;UBERON:0000988,4.83e-19,3;UBERON:0000025,1.13e-18,192;UBERON:0011216,3.64e-18,223;UBERON:0001871,1.49e-14,6;UBERON:0004111,6.31e-14,240;UBERON:0001954,9.83e-14,2;UBERON:0003022,9.83e-14,2;UBERON:0002421,9.83e-14,2;UBERON:0002600,9.83e-14,2;UBERON:0002771,2.11e-13,2;UBERON:0002148,4.47e-13,2;UBERON:0006331,4.47e-13,2;UBERON:0009662,4.47e-13,2;UBERON:0002021,5.22e-12,5;UBERON:0001872,6.07e-12,5;UBERON:0000349,6.79e-12,5;UBERON:0002037,1.35e-10,6;UBERON:0006215,1.35e-10,6;UBERON:0000483,8.26e-10,306;UBERON:0000119,1.16e-09,309;UBERON:0001896,3.54e-09,3;UBERON:0005290,3.54e-09,3;UBERON:0010096,3.54e-09,3;UBERON:0002022,1.01e-07,1;UBERON:0002784,3.95e-07,4 | |||
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| ||
|short_description=p8@TRPM3 | |||
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Latest revision as of 18:52, 17 September 2015
Short description: | p8@TRPM3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TRPM3_5end |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | 83bp_to_ENST00000377110, ENST00000377111, NM_001007471, uc004aic.2, uc004aid.2, uc010mor.2_5end |
EntrezGene: | TRPM3 |
HGNC: | 17992 |
UniProt: | Q9HCF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data