FFCP PHASE1:Hg19::chr19:13106214..13106382,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4784 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7788 | |||
|TSSclassifier=S | |||
|UniProt=Q14938 | |||
|association_with_transcript=-201bp_to_ENST00000360105,ENST00000397661,NM_002501,uc002mwd.2_5end | |||
|coexpression_cluster_id=C1780 | |||
|description=CAGE_peak_1_at_NFIX_5end | |||
|id=chr19:13106214..13106382,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.95e-30!180;CL:0000057!3.11e-17!75;CL:0000680!1.89e-10!57;CL:0000056!1.89e-10!57;CL:0000355!1.89e-10!57;CL:0000187!5.54e-10!54;CL:0000183!4.26e-09!59;CL:0000393!1.61e-08!60;CL:0000211!1.61e-08!60;CL:0000136!2.52e-08!15;CL:0000192!2.70e-07!42;CL:0000514!2.70e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000057;2.94e-07;73!CL:0000136;3.37e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.63e-17,76;CL:0000680,6.88e-11,58;CL:0000056,6.88e-11,58;CL:0000355,6.88e-11,58;CL:0000187,2.03e-10,55;CL:0000393,6.10e-09,61;CL:0000211,6.10e-09,61;CL:0000136,2.44e-08,15;CL:0000192,1.05e-07,43;CL:0000514,1.05e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@NFIX | |||
}} |
Revision as of 18:52, 11 September 2013
Short description: | p1@NFIX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NFIX_5end |
Coexpression cluster: | C1780_Mesenchymal_tenocyte_Osteoblast_Smooth_mature_Synoviocyte_Chondrocyte |
Association with transcript: | -201bp_to_ENST00000360105, ENST00000397661, NM_002501, uc002mwd.2_5end |
EntrezGene: | NFIX |
HGNC: | 7788 |
UniProt: | Q14938 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.63e-17 | 76 |
muscle precursor cell | 6.88e-11 | 58 |
myoblast | 6.88e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.88e-11 | 58 |
muscle cell | 2.03e-10 | 55 |
electrically responsive cell | 6.10e-09 | 61 |
electrically active cell | 6.10e-09 | 61 |
fat cell | 2.44e-08 | 15 |
smooth muscle cell | 1.05e-07 | 43 |
smooth muscle myoblast | 1.05e-07 | 43 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.