FFCP PHASE1:Hg19::chr20:5903160..5903179,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C377|description=CAGE_peak_at_chr20:5903160..5903179,+|id=chr20:5903160..5903179,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;1.27e-32;3!UBERON:0010227;1.32e-11;1!UBERON:0006601;1.33e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3119;1.77e-07;14|ontology_enrichment_disease_v019_2=DOID:3119,1.73e-07,14|ontology_enrichment_uberon=UBERON:0001049!1.49e-48!57;UBERON:0005068!1.49e-48!57;UBERON:0006241!1.49e-48!57;UBERON:0007135!1.49e-48!57;UBERON:0002616!1.40e-46!59;UBERON:0002780!1.42e-43!41;UBERON:0001890!1.42e-43!41;UBERON:0006240!1.42e-43!41;UBERON:0000955!1.69e-42!69;UBERON:0006238!1.69e-42!69;UBERON:0003080!2.33e-42!42;UBERON:0001017!1.29e-38!82;UBERON:0007023!3.72e-37!115;UBERON:0005743!2.44e-36!86;UBERON:0000073!6.31e-36!94;UBERON:0001016!6.31e-36!94;UBERON:0003075!1.29e-34!86;UBERON:0007284!1.29e-34!86;UBERON:0002346!1.32e-32!90;UBERON:0001893!2.63e-32!34;UBERON:0001869!9.16e-32!32;UBERON:0002791!2.37e-30!33;UBERON:0002020!9.45e-30!34;UBERON:0003528!9.45e-30!34;UBERON:0003056!8.75e-29!61;UBERON:0002619!6.50e-28!22;UBERON:0001950!1.72e-27!20;UBERON:0000033!3.20e-25!123;UBERON:0000956!3.77e-24!25;UBERON:0000203!3.77e-24!25;UBERON:0000153!1.55e-23!129;UBERON:0007811!1.55e-23!129;UBERON:0004121!1.00e-21!169;UBERON:0000924!6.07e-21!173;UBERON:0006601!6.07e-21!173;UBERON:0001871!2.35e-15!7;UBERON:0001894!3.09e-13!7;UBERON:0006222!3.09e-13!7;UBERON:0003296!5.75e-12!4;UBERON:0010133!5.75e-12!4;UBERON:0000369!1.07e-10!4;UBERON:0002435!1.07e-10!4;UBERON:0000204!1.07e-10!4;UBERON:0010082!1.07e-10!4;UBERON:0000200!1.94e-10!6;UBERON:0004733!2.09e-10!12;UBERON:0002028!2.09e-10!12;UBERON:0007277!2.09e-10!12;UBERON:0002420!3.97e-10!9;UBERON:0007245!3.97e-10!9;UBERON:0010009!3.97e-10!9;UBERON:0010011!3.97e-10!9;UBERON:0000454!3.97e-10!9;UBERON:0000025!8.79e-10!194;UBERON:0004732!1.64e-09!13;UBERON:0004111!5.22e-09!241;UBERON:0005383!1.18e-08!3;UBERON:0005382!1.18e-08!3;UBERON:0000349!1.83e-08!5;UBERON:0001872!2.28e-08!5;UBERON:0002771!2.87e-08!3;UBERON:0003076!4.43e-08!15;UBERON:0003057!4.43e-08!15;UBERON:0002680!7.85e-08!9;UBERON:0001895!7.85e-08!9;UBERON:0010092!7.85e-08!9;UBERON:0000481!9.31e-08!347;UBERON:0002108!3.85e-07!14;UBERON:0002308!3.91e-07!9;UBERON:0000125!3.91e-07!9;UBERON:0000007!6.10e-07!2;UBERON:0000064!6.38e-07!219;UBERON:0000475!9.58e-07!365|ontology_enrichment_uberon_v019=UBERON:0003296;1.65e-42;4!UBERON:0010133;1.65e-42;4!UBERON:0002680;3.23e-29;9!UBERON:0001895;3.23e-29;9!UBERON:0001894;1.83e-24;7!UBERON:0000007;1.20e-22;2!UBERON:0004733;6.38e-22;12!UBERON:0002028;6.38e-22;12!UBERON:0001905;1.02e-21;2!UBERON:0002757;1.02e-21;2!UBERON:0010134;1.02e-21;2!UBERON:0005408;1.02e-21;2!UBERON:0001899;1.02e-21;2!UBERON:0004732;3.09e-20;13!UBERON:0002037;1.18e-16;6!UBERON:0000073;2.67e-16;53!UBERON:0002616;2.67e-16;53!UBERON:0000988;8.08e-15;3!UBERON:0000955;1.48e-12;68!UBERON:0002079;1.32e-11;1!UBERON:0001874;1.32e-11;1!UBERON:0003112;1.32e-11;1!UBERON:0011158;1.32e-11;1!UBERON:0003128;1.32e-11;1!UBERON:0001703;1.32e-11;1!UBERON:0002241;1.32e-11;1!UBERON:0002784;2.37e-11;4!UBERON:0001016;7.87e-09;83!UBERON:0001017;4.15e-08;75!UBERON:0002298;7.33e-08;6!UBERON:0001871;6.20e-07;6!UBERON:0007023;7.73e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.05e-42,4;UBERON:0010133,2.05e-42,4;UBERON:0002680,3.05e-29,9;UBERON:0001895,3.05e-29,9;UBERON:0010092,3.05e-29,9;UBERON:0000073,2.83e-26,53;UBERON:0002616,2.83e-26,53;UBERON:0001049,8.35e-25,56;UBERON:0005068,8.35e-25,56;UBERON:0006241,8.35e-25,56;UBERON:0007135,8.35e-25,56;UBERON:0001894,2.06e-24,7;UBERON:0006222,2.06e-24,7;UBERON:0000007,1.20e-22,2;UBERON:0004733,6.11e-22,12;UBERON:0002028,6.11e-22,12;UBERON:0007277,6.11e-22,12;UBERON:0001905,1.26e-21,2;UBERON:0002757,1.26e-21,2;UBERON:0010134,1.26e-21,2;UBERON:0005408,1.26e-21,2;UBERON:0001899,1.26e-21,2;UBERON:0004732,2.97e-20,13;UBERON:0000955,6.95e-20,68;UBERON:0006238,6.95e-20,68;UBERON:0003076,1.50e-17,15;UBERON:0003057,1.50e-17,15;UBERON:0001016,2.18e-17,89;UBERON:0002037,1.18e-16,6;UBERON:0006215,1.18e-16,6;UBERON:0001017,1.68e-16,81;UBERON:0003075,1.68e-16,82;UBERON:0007284,1.68e-16,82;UBERON:0007023,5.88e-16,114;UBERON:0002346,1.16e-15,86;UBERON:0000988,7.53e-15,3;UBERON:0010314,2.22e-13,132;UBERON:0010371,1.13e-12,104;UBERON:0001874,1.19e-11,1;UBERON:0002780,1.30e-11,41;UBERON:0001890,1.30e-11,41;UBERON:0003080,1.30e-11,41;UBERON:0006240,1.30e-11,41;UBERON:0003112,1.32e-11,1;UBERON:0011158,1.32e-11,1;UBERON:0003128,1.32e-11,1;UBERON:0001703,1.32e-11,1;UBERON:0002241,1.32e-11,1;UBERON:0004761,1.32e-11,1;UBERON:0009617,1.32e-11,1;UBERON:0002079,1.47e-11,1;UBERON:0002784,2.63e-11,4;UBERON:0004121,2.86e-08,171;UBERON:0000924,2.86e-08,171;UBERON:0006601,2.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903160..5903179,+ | |||
|id=chr20:5903160..5903179,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.27e-32;3!UBERON:0010227;1.32e-11;1!UBERON:0006601;1.33e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.73e-07,14 | |||
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|short_description=p@chr20:5903160..5903179,+ | |||
}} |
Revision as of 09:27, 12 September 2013
Short description: | p@chr20:5903160..5903179, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:5903160..5903179, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.73e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.