FFCP PHASE1:Hg19::chr20:42875935..42875966,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=78997|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4213|TSSclassifier=S|UniProt=Q5TE61|association_with_transcript=0bp_to_ENST00000438466_5end|coexpression_cluster_id=C2494|description=CAGE_peak_1_at_GDAP1L1_5end|id=chr20:42875935..42875966,+|ontology_enrichment_celltype=CL:0000047!2.82e-11!8;CL:0002319!2.54e-09!25;CL:0000540!5.55e-09!6;CL:0000031!5.55e-09!6;CL:0000404!5.55e-09!6;CL:0002322!3.59e-07!5|ontology_enrichment_celltype_v019=CL:0000540;4.18e-13;6!CL:0000404;4.18e-13;6!CL:0002322;2.71e-10;5!CL:0002321;5.26e-08;15|ontology_enrichment_celltype_v019_2=CL:0000047,1.18e-16,8;CL:0000540,4.31e-13,6;CL:0000031,4.31e-13,6;CL:0000404,4.31e-13,6;CL:0002322,2.76e-10,5|ontology_enrichment_development_v019=UBERON:0006601;9.19e-18;82!CL:0000031;4.18e-13;6!UBERON:0006215;4.64e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.62e-73!82;UBERON:0005743!1.99e-72!86;UBERON:0000073!3.57e-70!94;UBERON:0001016!3.57e-70!94;UBERON:0001049!6.85e-64!57;UBERON:0005068!6.85e-64!57;UBERON:0006241!6.85e-64!57;UBERON:0007135!6.85e-64!57;UBERON:0000955!9.95e-57!69;UBERON:0006238!9.95e-57!69;UBERON:0002346!3.52e-55!90;UBERON:0002616!8.36e-54!59;UBERON:0003075!1.57e-53!86;UBERON:0007284!1.57e-53!86;UBERON:0003080!5.12e-50!42;UBERON:0002780!3.49e-49!41;UBERON:0001890!3.49e-49!41;UBERON:0006240!3.49e-49!41;UBERON:0001893!9.87e-42!34;UBERON:0002020!1.30e-41!34;UBERON:0003528!1.30e-41!34;UBERON:0002791!2.04e-40!33;UBERON:0001869!7.17e-40!32;UBERON:0000924!3.44e-39!173;UBERON:0006601!3.44e-39!173;UBERON:0007023!2.60e-38!115;UBERON:0003056!3.29e-38!61;UBERON:0004121!1.84e-37!169;UBERON:0000956!5.79e-32!25;UBERON:0000203!5.79e-32!25;UBERON:0002619!3.39e-30!22;UBERON:0000033!2.45e-29!123;UBERON:0001950!6.32e-28!20;UBERON:0000153!6.63e-28!129;UBERON:0007811!6.63e-28!129;UBERON:0003076!1.68e-14!15;UBERON:0003057!1.68e-14!15;UBERON:0000025!1.59e-13!194;UBERON:0004733!1.73e-11!12;UBERON:0002028!1.73e-11!12;UBERON:0007277!1.73e-11!12;UBERON:0001871!2.37e-11!7;UBERON:0002420!2.65e-11!9;UBERON:0007245!2.65e-11!9;UBERON:0010009!2.65e-11!9;UBERON:0010011!2.65e-11!9;UBERON:0000454!2.65e-11!9;UBERON:0002308!5.77e-11!9;UBERON:0000125!5.77e-11!9;UBERON:0004732!2.29e-10!13;UBERON:0002298!2.05e-09!8;UBERON:0000064!3.11e-09!219;UBERON:0000200!3.89e-09!6;UBERON:0009663!6.97e-09!7;UBERON:0001894!1.04e-08!7;UBERON:0006222!1.04e-08!7;UBERON:0002680!1.39e-08!9;UBERON:0001895!1.39e-08!9;UBERON:0010092!1.39e-08!9;UBERON:0004111!4.17e-08!241;UBERON:0000922!4.19e-08!612;UBERON:0002021!5.66e-08!5;UBERON:0001872!5.98e-08!5;UBERON:0000483!1.53e-07!309;UBERON:0000349!1.59e-07!5;UBERON:0000119!2.79e-07!312;UBERON:0000477!8.96e-07!286|ontology_enrichment_uberon_v019=UBERON:0002780;7.89e-48;41!UBERON:0001890;7.89e-48;41!UBERON:0001869;8.99e-47;32!UBERON:0001893;1.39e-46;34!UBERON:0003528;1.80e-46;34!UBERON:0002020;1.80e-46;34!UBERON:0002791;2.83e-46;32!UBERON:0002619;3.80e-46;22!UBERON:0000073;2.81e-43;53!UBERON:0002616;2.81e-43;53!UBERON:0001950;1.28e-42;20!UBERON:0000956;5.96e-40;25!UBERON:0000203;5.96e-40;25!UBERON:0000955;4.70e-31;68!UBERON:0001017;1.62e-30;75!UBERON:0001016;1.75e-28;83!UBERON:0002420;1.09e-16;9!UBERON:0007245;1.09e-16;9!UBERON:0010009;1.09e-16;9!UBERON:0010011;1.09e-16;9!UBERON:0000454;1.09e-16;9!UBERON:0000125;3.73e-16;9!UBERON:0002308;3.73e-16;9!UBERON:0001871;6.24e-15;6!UBERON:0000200;2.36e-13;6!UBERON:0009663;6.26e-13;7!UBERON:0001894;9.47e-13;7!UBERON:0011216;2.34e-12;132!UBERON:0004733;5.49e-12;12!UBERON:0002028;5.49e-12;12!UBERON:0002021;1.63e-11;5!UBERON:0001872;1.74e-11;5!UBERON:0002298;3.11e-11;6!UBERON:0004732;6.39e-11;13!UBERON:0000349;8.48e-11;5!UBERON:0007023;1.10e-10;114!UBERON:0000369;1.03e-08;4!UBERON:0002435;1.03e-08;4!UBERON:0000204;1.03e-08;4!UBERON:0000922;2.86e-08;49!UBERON:0003296;3.91e-08;4!UBERON:0010133;3.91e-08;4!UBERON:0002784;5.82e-08;4!UBERON:0002680;9.11e-08;9!UBERON:0001895;9.11e-08;9!UBERON:0001870;1.65e-07;3!UBERON:0005383;8.15e-07;3!UBERON:0005382;8.15e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.99e-89,81;UBERON:0001016,2.81e-88,89;UBERON:0001049,1.91e-82,56;UBERON:0005068,1.91e-82,56;UBERON:0006241,1.91e-82,56;UBERON:0007135,1.91e-82,56;UBERON:0000073,2.45e-77,53;UBERON:0002616,2.45e-77,53;UBERON:0000955,2.39e-68,68;UBERON:0006238,2.39e-68,68;UBERON:0002780,9.19e-67,41;UBERON:0001890,9.19e-67,41;UBERON:0003080,9.19e-67,41;UBERON:0006240,9.19e-67,41;UBERON:0003075,1.37e-56,82;UBERON:0007284,1.37e-56,82;UBERON:0001893,3.76e-55,34;UBERON:0003528,5.60e-55,34;UBERON:0002020,5.60e-55,34;UBERON:0002346,2.95e-53,86;UBERON:0001869,3.21e-52,32;UBERON:0002791,1.33e-51,32;UBERON:0003056,3.38e-46,61;UBERON:0002619,3.64e-46,22;UBERON:0001950,1.28e-42,20;UBERON:0010371,2.02e-41,104;UBERON:0000956,5.75e-40,25;UBERON:0000203,5.75e-40,25;UBERON:0004121,4.61e-39,171;UBERON:0000924,4.61e-39,171;UBERON:0006601,4.61e-39,171;UBERON:0011216,3.69e-36,223;UBERON: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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=78997 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4213 | |||
|TSSclassifier=S | |||
|UniProt=Q5TE61 | |||
|association_with_transcript=0bp_to_ENST00000438466_5end | |||
|coexpression_cluster_id=C2494 | |||
|description=CAGE_peak_1_at_GDAP1L1_5end | |||
|id=chr20:42875935..42875966,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.82e-11!8;CL:0002319!2.54e-09!25;CL:0000540!5.55e-09!6;CL:0000031!5.55e-09!6;CL:0000404!5.55e-09!6;CL:0002322!3.59e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.18e-13;6!CL:0000404;4.18e-13;6!CL:0002322;2.71e-10;5!CL:0002321;5.26e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.18e-16,8;CL:0000540,4.31e-13,6;CL:0000031,4.31e-13,6;CL:0000404,4.31e-13,6;CL:0002322,2.76e-10,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.19e-18;82!CL:0000031;4.18e-13;6!UBERON:0006215;4.64e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@GDAP1L1 | |||
}} |
Revision as of 08:35, 12 September 2013
Short description: | p1@GDAP1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GDAP1L1_5end |
Coexpression cluster: | C2494_brain_neuroblastoma_duodenum_occipital_temporal_parietal_small |
Association with transcript: | 0bp_to_ENST00000438466_5end |
EntrezGene: | GDAP1L1 |
HGNC: | 4213 |
UniProt: | Q5TE61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.18e-16 | 8 |
neuron | 4.31e-13 | 6 |
neuroblast | 4.31e-13 | 6 |
electrically signaling cell | 4.31e-13 | 6 |
embryonic stem cell | 2.76e-10 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.