FFCP PHASE1:Hg19::chrX:50557209..50557242,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57477 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29215 | |||
|TSSclassifier=strong | |||
|UniProt=Q9ULL8 | |||
|association_with_transcript=59bp_to_ENST00000289292_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_SHROOM4_5end | |||
|id=chrX:50557209..50557242,- | |||
|ontology_enrichment_celltype=CL:0000128!6.80e-08!7;CL:0000126!6.80e-08!7;CL:0000127!6.80e-08!7;CL:0002453!6.80e-08!7;CL:0000133!6.92e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.18e-08;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.24e-13;3!UBERON:0003057;1.24e-13;3!UBERON:0006601;8.35e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.16e-47!86;UBERON:0001049!1.19e-47!57;UBERON:0005068!1.19e-47!57;UBERON:0006241!1.19e-47!57;UBERON:0007135!1.19e-47!57;UBERON:0001017!4.57e-46!82;UBERON:0000073!2.00e-44!94;UBERON:0001016!2.00e-44!94;UBERON:0002616!4.66e-42!59;UBERON:0003075!1.35e-40!86;UBERON:0007284!1.35e-40!86;UBERON:0002346!3.75e-39!90;UBERON:0000955!7.07e-38!69;UBERON:0006238!7.07e-38!69;UBERON:0001893!2.35e-34!34;UBERON:0002020!2.46e-34!34;UBERON:0003528!2.46e-34!34;UBERON:0002780!3.38e-33!41;UBERON:0001890!3.38e-33!41;UBERON:0006240!3.38e-33!41;UBERON:0002791!4.42e-33!33;UBERON:0003080!4.17e-32!42;UBERON:0001869!1.23e-31!32;UBERON:0003056!7.38e-29!61;UBERON:0004121!2.08e-27!169;UBERON:0000033!2.80e-27!123;UBERON:0000924!5.20e-27!173;UBERON:0006601!5.20e-27!173;UBERON:0000153!4.26e-26!129;UBERON:0007811!4.26e-26!129;UBERON:0000956!1.33e-25!25;UBERON:0000203!1.33e-25!25;UBERON:0007023!3.48e-23!115;UBERON:0002619!1.53e-22!22;UBERON:0000025!3.93e-21!194;UBERON:0001950!2.73e-20!20;UBERON:0004111!1.22e-17!241;UBERON:0003076!1.63e-16!15;UBERON:0003057!1.63e-16!15;UBERON:0000477!7.28e-16!286;UBERON:0000483!4.71e-14!309;UBERON:0004732!5.22e-14!13;UBERON:0000119!1.18e-13!312;UBERON:0004733!1.10e-12!12;UBERON:0002028!1.10e-12!12;UBERON:0007277!1.10e-12!12;UBERON:0000064!1.09e-10!219;UBERON:0000922!1.44e-10!612;UBERON:0002308!4.31e-10!9;UBERON:0000125!4.31e-10!9;UBERON:0002420!8.94e-10!9;UBERON:0007245!8.94e-10!9;UBERON:0010009!8.94e-10!9;UBERON:0010011!8.94e-10!9;UBERON:0000454!8.94e-10!9;UBERON:0000475!2.80e-09!365;UBERON:0002298!3.13e-09!8;UBERON:0002680!6.61e-09!9;UBERON:0001895!6.61e-09!9;UBERON:0010092!6.61e-09!9;UBERON:0000200!8.87e-09!6;UBERON:0000923!2.42e-08!604;UBERON:0005291!2.42e-08!604;UBERON:0006598!2.42e-08!604;UBERON:0002532!2.42e-08!604;UBERON:0001871!2.53e-08!7;UBERON:0002050!2.88e-08!605;UBERON:0005423!2.88e-08!605;UBERON:0000468!3.43e-08!659;UBERON:0000481!3.94e-08!347;UBERON:0009663!1.49e-07!7;UBERON:0001872!2.45e-07!5;UBERON:0000349!2.55e-07!5;UBERON:0000467!3.17e-07!625;UBERON:0000480!3.72e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.76e-42;34!UBERON:0003528;2.28e-40;34!UBERON:0002020;2.28e-40;34!UBERON:0000073;2.81e-40;53!UBERON:0002616;2.81e-40;53!UBERON:0002791;1.43e-38;32!UBERON:0001869;2.14e-38;32!UBERON:0002780;2.73e-34;41!UBERON:0001890;2.73e-34;41!UBERON:0000956;3.88e-31;25!UBERON:0000203;3.88e-31;25!UBERON:0002619;5.00e-31;22!UBERON:0001950;2.28e-29;20!UBERON:0001017;7.56e-26;75!UBERON:0002298;1.99e-25;6!UBERON:0004732;9.80e-25;13!UBERON:0000955;2.02e-23;68!UBERON:0000125;3.47e-22;9!UBERON:0002308;3.47e-22;9!UBERON:0001016;3.52e-22;83!UBERON:0004733;4.10e-21;12!UBERON:0002028;4.10e-21;12!UBERON:0000200;1.25e-16;6!UBERON:0002420;4.28e-16;9!UBERON:0007245;4.28e-16;9!UBERON:0010009;4.28e-16;9!UBERON:0010011;4.28e-16;9!UBERON:0000454;4.28e-16;9!UBERON:0009663;6.38e-15;7!UBERON:0001871;8.80e-14;6!UBERON:0002240;1.24e-13;3!UBERON:0005174;1.24e-13;3!UBERON:0001137;1.24e-13;3!UBERON:0000988;1.33e-13;3!UBERON:0001896;1.38e-13;3!UBERON:0005290;1.38e-13;3!UBERON:0002680;2.83e-11;9!UBERON:0001895;2.83e-11;9!UBERON:0007023;7.82e-11;114!UBERON:0011216;2.43e-10;132!UBERON:0005162;4.74e-10;2!UBERON:0000122;4.74e-10;2!UBERON:0001875;1.14e-09;2!UBERON:0006514;1.14e-09;2!UBERON:0002148;1.50e-09;2!UBERON:0006331;1.50e-09;2!UBERON:0009662;1.50e-09;2!UBERON:0002771;5.74e-09;2!UBERON:0002021;3.94e-08;5!UBERON:0001872;5.08e-08;5!UBERON:0000349;1.19e-07;5 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.738726348460727,0.204000691244253,1.25381888591235,0.85870796139317,1.23186982565596,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,1.5905718941022,0,0.472674085820339,0.443458794925128,0.790513071238134,0.785874452986276,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0.81014194788176,0,0.22452937262617,0.112611480483322,0,1.89853131913626,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0.653847612453835,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.731842236777572,0.265059536642971,0.69716365721711,0.518305275076852,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.205654985406647,0.600686115687835,1.14330573052231,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0.178064071293475,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.40669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,2.90799823828566,2.87581104301739,0,0,0,0,0,0,0,0,0,0,0,0.844175070377856,0,0.442317039724898,1.18219047581419,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0427688141209,0,4.68528891450678,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.759729551470544,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,3.28572909340783,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.268733889946905,0,1.16495949527454,0.0787831823072236,0,0.13480708770837,0,0,0.795229689809303,2.04305109167363,0.803765742325096,1.10031549277787,0.415440338029185,0,0,1.39723980313457,0,0.157611414598396,0.629455057619977,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,4.91275234173892,2.77688463659649,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.92863035764712,1.502291168478,2.29363678276028,3.99344585532668,5.71286907060728,0,0,0.606596470166591,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.465788870628778,0,0,0,0,0,0,0,0.644463342254931,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,1.92687675289379,0,2.23487402680012,3.69209455633359,0.252071696221718,2.07471757392654,1.77623210195036,7.13847101295772,0,0,0,0,0,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,2.566428215499,2.34323429584154,0.826747186004736,2.47321659756237,0.546974809018219,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,4.2820931775404,2.10472875401117,0,0,0.078493092850514,2.04250266890802,0,2.73947616152849,0.215927591218621,0,0.214429632529969,0,0,0.347716544605159,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,2.01339777236026,0,0.121917924982269,0,0,0,0,0.233939463462106,0.596852325484105,0.475680363110274,0,0,0,0,0,0,0,0,7.45972175036792,3.56455680392503,2.113278637917,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,5.73358332605805,0,1.76777874496378,0.436350690340377,0.5290268405154,0,0.462175628631418,0.432626562123789,0,1.31118686356435,0,0,0.26721740526556,0.551369397209069,0,0,0,0.829169439458779,5.58538177654234,0,0.476128862927481,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@SHROOM4 | |||
}} |
Revision as of 05:42, 23 January 2014
Short description: | p5@SHROOM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SHROOM4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 59bp_to_ENST00000289292_5end |
EntrezGene: | SHROOM4 |
HGNC: | 29215 |
UniProt: | Q9ULL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data