FFCP PHASE1:Hg19::chr11:12030588..12030599,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27122 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2893 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBP4 | |||
|association_with_transcript=29bp_to_ENST00000396505,NM_015881,uc001mjv.2_5end | |||
|coexpression_cluster_id=C2103 | |||
|description=CAGE_peak_9_at_DKK3_5end | |||
|id=chr11:12030588..12030599,- | |||
|ontology_enrichment_celltype=CL:0002321!1.21e-07!248;CL:0000220!1.98e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.11e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.64e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.89e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.29e-31!169;UBERON:0000924!1.62e-29!173;UBERON:0006601!1.62e-29!173;UBERON:0000033!1.21e-27!123;UBERON:0000153!9.08e-27!129;UBERON:0007811!9.08e-27!129;UBERON:0005743!6.06e-26!86;UBERON:0001017!6.17e-25!82;UBERON:0003075!1.80e-24!86;UBERON:0007284!1.80e-24!86;UBERON:0000955!1.41e-23!69;UBERON:0006238!1.41e-23!69;UBERON:0000073!2.06e-23!94;UBERON:0001016!2.06e-23!94;UBERON:0001049!4.44e-23!57;UBERON:0005068!4.44e-23!57;UBERON:0006241!4.44e-23!57;UBERON:0007135!4.44e-23!57;UBERON:0002616!3.10e-22!59;UBERON:0002346!8.51e-22!90;UBERON:0000483!1.64e-19!309;UBERON:0004111!2.95e-19!241;UBERON:0000477!3.09e-19!286;UBERON:0000119!3.20e-19!312;UBERON:0000475!9.29e-19!365;UBERON:0000468!1.47e-17!659;UBERON:0000467!4.79e-17!625;UBERON:0000480!7.96e-17!626;UBERON:0000025!1.52e-16!194;UBERON:0003056!3.86e-16!61;UBERON:0001893!7.09e-16!34;UBERON:0002020!1.41e-15!34;UBERON:0003528!1.41e-15!34;UBERON:0002780!1.52e-15!41;UBERON:0001890!1.52e-15!41;UBERON:0006240!1.52e-15!41;UBERON:0000064!1.90e-15!219;UBERON:0002791!2.57e-15!33;UBERON:0001869!3.06e-15!32;UBERON:0003080!9.78e-15!42;UBERON:0007023!9.66e-14!115;UBERON:0000062!3.44e-13!511;UBERON:0000481!4.55e-13!347;UBERON:0000956!3.61e-11!25;UBERON:0000203!3.61e-11!25;UBERON:0000922!6.05e-11!612;UBERON:0003076!5.77e-10!15;UBERON:0003057!5.77e-10!15;UBERON:0002050!1.15e-09!605;UBERON:0005423!1.15e-09!605;UBERON:0000923!1.43e-09!604;UBERON:0005291!1.43e-09!604;UBERON:0006598!1.43e-09!604;UBERON:0002532!1.43e-09!604;UBERON:0002619!1.82e-09!22;UBERON:0001950!2.67e-08!20;UBERON:0004733!4.19e-08!12;UBERON:0002028!4.19e-08!12;UBERON:0007277!4.19e-08!12;UBERON:0005631!2.52e-07!14;UBERON:0000158!2.52e-07!14;UBERON:0004732!5.12e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.19e-18;32!UBERON:0001893;1.33e-18;34!UBERON:0003528;2.20e-18;34!UBERON:0002020;2.20e-18;34!UBERON:0000073;1.40e-17;53!UBERON:0002616;1.40e-17;53!UBERON:0002791;2.25e-17;32!UBERON:0000956;1.30e-14;25!UBERON:0000203;1.30e-14;25!UBERON:0002780;3.39e-14;41!UBERON:0001890;3.39e-14;41!UBERON:0000955;7.50e-14;68!UBERON:0001017;1.80e-13;75!UBERON:0002619;4.75e-12;22!UBERON:0004733;1.45e-11;12!UBERON:0002028;1.45e-11;12!UBERON:0001016;1.36e-10;83!UBERON:0001950;2.13e-10;20!UBERON:0004732;2.22e-10;13!UBERON:0002680;2.26e-08;9!UBERON:0001895;2.26e-08;9!UBERON:0002420;6.54e-08;9!UBERON:0007245;6.54e-08;9!UBERON:0010009;6.54e-08;9!UBERON:0010011;6.54e-08;9!UBERON:0000454;6.54e-08;9!UBERON:0000305;2.82e-07;7!UBERON:0000125;3.19e-07;9!UBERON:0002308;3.19e-07;9!UBERON:0002298;5.64e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,5.46e-39,104;UBERON:0003075,7.93e-37,82;UBERON:0007284,7.93e-37,82;UBERON:0004121,1.36e-35,171;UBERON:0000924,1.36e-35,171;UBERON:0006601,1.36e-35,171;UBERON:0002346,4.83e-34,86;UBERON:0001049,1.58e-33,56;UBERON:0005068,1.58e-33,56;UBERON:0006241,1.58e-33,56;UBERON:0007135,1.58e-33,56;UBERON:0000955,2.57e-31,68;UBERON:0006238,2.57e-31,68;UBERON:0001017,3.36e-31,81;UBERON:0000073,1.18e-30,53;UBERON:0002616,1.18e-30,53;UBERON:0010314,4.88e-29,132;UBERON:0001016,5.01e-26,89;UBERON:0003056,7.94e-23,61;UBERON:0001869,6.67e-21,32;UBERON:0001893,7.65e-21,34;UBERON:0002780,1.19e-20,41;UBERON:0001890,1.19e-20,41;UBERON:0003080,1.19e-20,41;UBERON:0006240,1.19e-20,41;UBERON:0003528,2.08e-20,34;UBERON:0002020,2.08e-20,34;UBERON:0002791,3.96e-19,32;UBERON:0007023,1.22e-16,114;UBERON:0000956,1.07e-14,25;UBERON:0000203,1.07e-14,25;UBERON:0003076,1.32e-14,15;UBERON:0003057,1.32e-14,15;UBERON:0000483,4.93e-14,306;UBERON:0000119,1.36e-13,309;UBERON:0002619,3.98e-12,22;UBERON:0000025,9.85e-12,192;UBERON:0004733,1.01e-11,12;UBERON:0002028,1.01e-11,12;UBERON:0007277,1.01e-11,12;UBERON:0004111,1.28e-11,240;UBERON:0011216,4.32e-11,223;UBERON:0004732,1.60e-10,13;UBERON:0001950,2.20e-10,20;UBERON:0002680,1.67e-08,9;UBERON:0001895,1.67e-08,9;UBERON:0010092,1.67e-08,9;UBERON:0005631,5.27e-08,14;UBERON:0000158,5.27e-08,14;UBERON:0002420,6.07e-08,9;UBERON:0007245,6.07e-08,9;UBERON:0010009,6.07e-08,9;UBERON:0010011,6.07e-08,9;UBERON:0000454,6.07e-08,9;UBERON:0005423,8.51e-08,581;UBERON:0005085,8.59e-08,31;UBERON:0002050,9.18e-08,564;UBERON:0000922,1.05e-07,592;UBERON:0000923,2.37e-07,560;UBERON:0010316,2.37e-07,560;UBERON:0005291,2.37e-07,560;UBERON:0006598,2.37e-07,560;UBERON:0010317,2.37e-07,560;UBERON:0002532,2.37e-07,560;UBERON:0000125,3.22e-07,9;UBERON:0002308,3.22e-07,9;UBERON:0000305,3.59e-07,7;UBERON:0002298,5.04e-07,6;UBERON:0000200,9.84e-07,6 | |||
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| |||
|short_description=p9@DKK3 | |||
}} |
Revision as of 06:38, 11 January 2014
Short description: | p9@DKK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DKK3_5end |
Coexpression cluster: | C2103_Fibroblast_putamen_left_caudate_hippocampus_heart_amniotic |
Association with transcript: | 29bp_to_ENST00000396505, NM_015881, uc001mjv.2_5end |
EntrezGene: | DKK3 |
HGNC: | 2893 |
UniProt: | Q9UBP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.64e-07 | 19 |