FFCP PHASE1:Hg19::chr5:68710906..68710983,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153562 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26401 | |||
|TSSclassifier=strong | |||
|UniProt=F8WBA0,Q8N4S9 | |||
|association_with_transcript=0bp_to_ENST00000282886,ENST00000325631,ENST00000454295,NM_001038603,NM_001244734,uc003jwq.2,uc003jwr.1,uc010ixf.2_5end | |||
|description=CAGE_peak_1_at_MARVELD2_5end | |||
|id=chr5:68710906..68710983,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.50e-57!254;CL:0000223!1.96e-21!59;CL:0002076!1.16e-15!43;CL:0000076!2.27e-11!62;CL:0002321!8.27e-09!248;CL:0000220!1.91e-08!246;CL:0002251!7.49e-08!21;CL:0002368!2.68e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.11e-13;42!CL:0002251;1.61e-08;20!CL:0002368;7.46e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.95e-60,253;CL:0000223,3.74e-23,58;CL:0002076,6.13e-17,42;CL:0000076,4.57e-12,63;CL:0002251,2.34e-08,20;CL:0002321,7.78e-08,250;CL:0002368,9.73e-08,13 | |||
|ontology_enrichment_development_v019=CL:0000223;6.97e-13;58!UBERON:0001041;4.59e-10;30!UBERON:0008947;2.97e-07;29!UBERON:0006595;3.48e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.62e-26!106;DOID:0050687!2.17e-14!143;DOID:299!3.57e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:305;1.49e-09;106!DOID:299;7.36e-09;25!DOID:1749;7.19e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.24e-28,106;DOID:0050687,3.45e-17,143;DOID:299,7.80e-09,25;DOID:1749,7.00e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.46e-29!169;UBERON:0000925!2.46e-29!169;UBERON:0006595!2.46e-29!169;UBERON:0001007!8.06e-24!155;UBERON:0001555!8.06e-24!155;UBERON:0007026!8.06e-24!155;UBERON:0004921!9.39e-20!129;UBERON:0004185!9.39e-20!129;UBERON:0000077!3.31e-19!130;UBERON:0000466!6.55e-18!126;UBERON:0005177!1.09e-16!107;UBERON:0005911!1.93e-16!82;UBERON:0000481!2.70e-16!347;UBERON:0001041!3.27e-15!98;UBERON:0000468!3.08e-14!659;UBERON:0000064!5.51e-14!219;UBERON:0009569!1.54e-13!113;UBERON:0000464!3.43e-13!104;UBERON:0000062!5.90e-13!511;UBERON:0001004!9.26e-13!72;UBERON:0000477!2.21e-12!286;UBERON:0004111!6.38e-12!241;UBERON:0000475!1.37e-11!365;UBERON:0000467!1.38e-11!625;UBERON:0000119!1.70e-11!312;UBERON:0000483!2.31e-11!309;UBERON:0000480!2.43e-11!626;UBERON:0000922!7.04e-11!612;UBERON:0001048!1.92e-10!168;UBERON:0000065!5.49e-10!53;UBERON:0003104!6.46e-10!238;UBERON:0009142!6.46e-10!238;UBERON:0005153!8.93e-10!37;UBERON:0005178!1.89e-09!34;UBERON:0002224!1.89e-09!34;UBERON:0008947!1.99e-09!38;UBERON:0003258!1.99e-09!38;UBERON:0002530!2.42e-09!59;UBERON:0002050!2.70e-09!605;UBERON:0005423!2.70e-09!605;UBERON:0005172!3.61e-09!55;UBERON:0005173!3.61e-09!55;UBERON:0000923!4.16e-09!604;UBERON:0005291!4.16e-09!604;UBERON:0006598!4.16e-09!604;UBERON:0002532!4.16e-09!604;UBERON:0001008!5.46e-09!45;UBERON:0006554!5.78e-09!44;UBERON:0005181!1.09e-08!35;UBERON:0002365!4.25e-08!31;UBERON:0002330!4.25e-08!31;UBERON:0003929!4.87e-08!54;UBERON:0005157!9.73e-08!51;UBERON:0002048!1.34e-07!22;UBERON:0000117!1.34e-07!22;UBERON:0000171!1.34e-07!22;UBERON:0000170!1.34e-07!22;UBERON:0005597!1.34e-07!22;UBERON:0000118!1.34e-07!22;UBERON:0002100!1.53e-07!216;UBERON:0000058!1.86e-07!26;UBERON:0002417!2.71e-07!61;UBERON:0000916!2.71e-07!61;UBERON:0000915!3.69e-07!52;UBERON:0000025!5.66e-07!194;UBERON:0009497!8.17e-07!25;UBERON:0000015!8.17e-07!25;UBERON:0002423!8.17e-07!25;UBERON:0006235!8.17e-07!25;UBERON:0004161!8.17e-07!25;UBERON:0000072!9.64e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0005178;4.07e-09;34!UBERON:0002224;4.07e-09;34!UBERON:0000065;5.01e-09;44!UBERON:0006554;1.97e-08;30!UBERON:0001008;1.97e-08;30!UBERON:0002365;2.08e-08;31!UBERON:0002330;2.08e-08;31!UBERON:0005181;2.10e-08;35!UBERON:0005911;3.45e-08;36!UBERON:0002048;3.57e-08;22!UBERON:0000117;3.57e-08;22!UBERON:0000171;3.57e-08;22!UBERON:0000170;3.57e-08;22!UBERON:0004807;6.44e-08;22!UBERON:0001004;1.40e-07;65!UBERON:0000072;2.45e-07;37!UBERON:0005177;2.71e-07;99!UBERON:0002423;3.98e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.07e-26,160;UBERON:0000925,1.07e-26,160;UBERON:0006595,1.07e-26,160;UBERON:0001007,7.32e-21,145;UBERON:0001555,7.32e-21,145;UBERON:0007026,7.32e-21,145;UBERON:0005177,1.13e-18,101;UBERON:0004921,6.19e-18,118;UBERON:0005911,2.86e-16,82;UBERON:0001041,9.52e-15,87;UBERON:0009569,3.90e-14,112;UBERON:0001004,4.31e-13,74;UBERON:0011216,5.67e-11,223;UBERON:0000065,2.80e-10,54;UBERON:0005178,3.49e-10,34;UBERON:0002224,3.49e-10,34;UBERON:0008947,3.64e-10,38;UBERON:0003258,3.64e-10,38;UBERON:0001008,5.37e-10,48;UBERON:0006554,5.72e-10,47;UBERON:0004111,1.07e-09,240;UBERON:0005153,1.09e-09,37;UBERON:0005172,1.57e-09,54;UBERON:0005173,1.57e-09,54;UBERON:0005181,1.70e-09,35;UBERON:0001048,5.42e-09,160;UBERON:0002530,7.09e-09,59;UBERON:0002365,1.41e-08,31;UBERON:0002330,1.41e-08,31;UBERON:0000922,1.69e-08,592;UBERON:0002048,3.22e-08,22;UBERON:0000117,3.22e-08,22;UBERON:0000171,3.22e-08,22;UBERON:0000170,3.22e-08,22;UBERON:0005597,3.22e-08,22;UBERON:0000118,3.22e-08,22;UBERON:0000119,3.25e-08,309;UBERON:0000483,4.31e-08,306;UBERON:0005157,9.15e-08,47;UBERON:0002417,1.02e-07,60;UBERON:0000916,1.02e-07,60;UBERON:0005423,1.54e-07,581;UBERON:0003929,2.11e-07,54;UBERON:0000915,2.67e-07,52;UBERON:0009497,3.38e-07,25;UBERON:0000015,3.38e-07,25;UBERON:0002423,3.38e-07,25;UBERON:0006235,3.38e-07,25;UBERON:0004161,3.38e-07,25;UBERON:0000072,7.29e-07,47;UBERON:0009856,9.06e-07,26;UBERON:0007499,9.99e-07,25 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0,3.00219895059391,0,1.74467704820074,0,1.26343974685366,0.261185628199839,7.61775203154677,5.58240934377942,10.7036272343784,8.17677632508206,0.495065411840187,0.994192127183747,0,0,0,0,2.95490539384291,2.44800829493104,1.25381888591235,1.14494394852423,1.23186982565596,2.00868223351684,0.687720651731561,0.656804715599566,0.393553906568396,0,0,0.309632246632152,10.1136334692682,8.433765725791,11.8321283253372,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0,0,0,2.10707267820062,0,0,0.205601498999509,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0.443067789167242,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0,0.802622484269139,0,0,1.14966148080576,0.34362744548263,0.506039384039006,0,0,0,0.752875595388864,0.127986611154418,0,0,0,0,0,0.289648807765598,0,0,1.15076305659177,1.0843174571537,2.50668955317945,0.724232594804119,0.795285947051099,0.486634870302636,2.74150969775797,1.55210578223795,2.63504357079378,4.32230949142452,6.19301990097322,8.52804218404188,0.649094787309367,0.174129737299267,0.531831842075461,0,0,0,7.7517338873015,2.58070378531837,3.81854551768354,6.21838736116411,1.67799774483962,1.92582629358047,4.59788926380983,1.29208379584664,1.77883131343355,2.67776490211736,1.61131726843659,1.52054421143703,3.90499292077071,1.47065232138347,2.43042584364528,3.83988831621543,3.14341121676638,4.16662477788292,3.06633274931766,2.84779697870439,1.83201743930407,0,0,17.4437620857014,0,0.506522046658319,0,0.573673241497627,0,1.12135520028461,0,4.19334832309172,0.933633106199299,4.04132016209064,0.980771418680752,1.81628913173918,0,3.51482147750695,0,2.2818872861778,1.79338416662161,1.52664848236894,0.971237666208789,0.98315564691574,2.44985005505872,0.491337269247072,2.06651562351531,3.56400857184616,1.48360157567134,3.64064544775211,0.718618141816238,0.841680569770331,0.750711119231785,3.04770527032601,0.877955241761676,0.612975591598039,2.40380894250555,1.24775401476023,1.97328599257748,1.06778694409284,1.05965950579781,0.600182192168805,0.515262646192195,3.34932702059318,1.48893485065272,3.37552664482532,1.85130309806277,1.51460264546469,0.460249493211497,0.646584227275248,1.06502877754984,1.0075209822764,0.67824236924195,11.0158686303079,7.36414525595254,10.0381608386151,5.73276418809098,5.16866096453793,6.39066685782351,5.90868013587612,5.55105871926382,1.82488679537915,1.56449532329816,1.92972281457866,0,1.39310378409594,1.44375896333917,1.65629520055781,3.20310911148393,2.41011029883482,2.31617342738027,3.05031221729369,2.37270619111097,2.42696354688296,2.15843611637881,1.15424147083917,3.69077727312324,1.40241773803446,1.6462960453256,2.94017422771084,13.9430538304014,24.5706804169407,14.1789577603537,0,12.5448207313976,1.54411029268673,13.3895348198523,10.1161577931858,5.93120937228622,7.40707561268237,1.95484983186195,1.03993478527958,0,1.85488647960123,3.05262605013136,4.18662698507114,1.38895653772983,1.90254152234598,8.69224837755203,12.0188062693282,0.492434012174795,0.468008530278475,0.148631162288728,6.56136837907439,13.9425166405053,12.47620855733,8.59761817947344,9.88155390947471,8.43441894163465,0,0.176096868026452,1.86595303986695,5.90891809009542,2.01987893482208,0.126995788584338,0.763976851116555,1.17217447210047,0,0.616964956219941,0,1.42913216315289,1.79409734952577,2.1798003441664,1.24675085895615,0,0,0.845302752556,1.86156681609409,3.12022310734098,1.28603687131071,1.41849132023278,0.266422179016099,0.714889968290738,0,0,0.325736184293735,0,0,1.20575750823834,0,2.69927076191554,0,0,0,3.35474797688216,4.59447743336456,0,0.144781306667579,0,0,0.112085143993527,0,0,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,1.71768088406796,1.50051156317903,1.89885516589815,0.831883446123229,1.42743191037729,5.83498935625558,0.234282829985426,1.80567659836631,2.27407504055985,0,0.664225598535437,1.84369168541703,1.39013783148933,1.37060810223918,0,0,0,0.213455115606889,4.24378600024763,6.65741758041988,2.41912234663744,0.248107807818777,1.2276957863045,0,0,1.02341449813341,0.160853921143607,2.96836132889982,0.462629081407967,0,0.739144404124282,0,0.232420756919918,8.46016147141356,10.6268429260741,13.9963103182562,1.49258782613989,0.910455840033585,1.83574180943194,10.8287907097779,10.6281165204092,4.70609861506113,5.84556898613043,9.49964660035881,4.54933536283586,1.02056223165909,2.59099099322567,1.54227252690289,4.6060894382455,4.01351819083883,18.0962153861977,14.1282921517883,9.62661445305367,1.31555925987561,1.3071772551245,2.56450125116389,3.28014645699706,4.55529752530024,7.83111688522689,0,0,15.5051695258967,12.3511446746939,0,0.386682873168488,1.69453478826109,1.38153307253517,0.413509717453592,0.859361958946189,0.870100163485371,1.02271952899321,0.0890320356467374,13.553363059600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| |||
|short_description=p1@MARVELD2 | |||
}} |
Revision as of 05:47, 22 January 2014
Short description: | p1@MARVELD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MARVELD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000282886, ENST00000325631, ENST00000454295, NM_001038603, NM_001244734, uc003jwq.2, uc003jwr.1, uc010ixf.2_5end |
EntrezGene: | MARVELD2 |
HGNC: | 26401 |
UniProt: | F8WBA0Q8N4S9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.95e-60 | 253 |
endodermal cell | 3.74e-23 | 58 |
endo-epithelial cell | 6.13e-17 | 42 |
squamous epithelial cell | 4.57e-12 | 63 |
epithelial cell of alimentary canal | 2.34e-08 | 20 |
embryonic cell | 7.78e-08 | 250 |
respiratory epithelial cell | 9.73e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.24e-28 | 106 |
cell type cancer | 3.45e-17 | 143 |
adenocarcinoma | 7.80e-09 | 25 |
squamous cell carcinoma | 7.00e-07 | 14 |