FFCP PHASE1:Mm9::chr10:57504816..57504829,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:57504816..57504829,+ to FFCP PHASE1:Mm9::chr10:57504816..57504829,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1894 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:57504816..57504829,+ | |||
|description=CAGE_peak_at_chr10:57504816..57504829,+ | |||
|id=chr10:57504816..57504829,+ | |||
|ontology_enrichment_celltype=CL:0000221!6.44e-20!44;CL:0000133!6.44e-20!44;CL:0002319!5.52e-19!43;CL:0000540!6.32e-19!33;CL:0000047!6.32e-19!33;CL:0000031!6.32e-19!33;CL:0000404!6.32e-19!33;CL:0000055!1.33e-15!50;CL:0000393!3.46e-14!39;CL:0000211!3.46e-14!39;CL:0000117!3.87e-11!23;CL:0000337!3.87e-11!23;CL:0000107!2.46e-08!9;CL:0002321!3.42e-08!70;CL:0000220!3.42e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.02e-18,33;CL:0000047,7.02e-18,33;CL:0000031,7.02e-18,33;CL:0000404,7.02e-18,33;CL:0000221,1.02e-16,44;CL:0000133,1.02e-16,44;CL:0002319,6.22e-15,43;CL:0000393,1.21e-14,39;CL:0000211,1.21e-14,39;CL:0000107,1.41e-11,9;CL:0002612,7.67e-11,3;CL:0002321,3.58e-09,70;CL:0002611,1.33e-07,2;CL:0000197,1.78e-07,2;CL:0002491,1.78e-07,2;CL:0000098,1.78e-07,2;CL:0000117,1.91e-07,23;CL:0000337,1.91e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.39e-24!75;UBERON:0001016!1.39e-24!75;UBERON:0001017!3.98e-24!73;UBERON:0005743!3.98e-24!73;UBERON:0004121!2.76e-20!102;UBERON:0000924!2.76e-20!102;UBERON:0006601!2.76e-20!102;UBERON:0002346!2.98e-16!71;UBERON:0003075!2.98e-16!71;UBERON:0007284!2.98e-16!71;UBERON:0002020!7.94e-15!34;UBERON:0001049!1.56e-14!52;UBERON:0005068!1.56e-14!52;UBERON:0006241!1.56e-14!52;UBERON:0007135!1.56e-14!52;UBERON:0000033!9.58e-12!63;UBERON:0000955!4.81e-11!50;UBERON:0006238!4.81e-11!50;UBERON:0002791!1.59e-10!29;UBERON:0003528!1.59e-10!29;UBERON:0001893!1.59e-10!29;UBERON:0002616!2.46e-10!49;UBERON:0003056!5.23e-10!49;UBERON:0003080!5.30e-10!40;UBERON:0002780!1.38e-09!39;UBERON:0001890!1.38e-09!39;UBERON:0006240!1.38e-09!39;UBERON:0000956!8.27e-09!21;UBERON:0001869!8.27e-09!21;UBERON:0000203!8.27e-09!21;UBERON:0002410!2.46e-08!9;UBERON:0000010!2.70e-08!11;UBERON:0002240!5.94e-07!6;UBERON:0005174!5.94e-07!6;UBERON:0001137!5.94e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,8.40e-17,5;UBERON:0002315,8.40e-17,5;UBERON:0004121,2.20e-15,95;UBERON:0000924,2.20e-15,95;UBERON:0006601,2.20e-15,95;UBERON:0001017,2.76e-14,73;UBERON:0002240,6.04e-14,6;UBERON:0005174,6.04e-14,6;UBERON:0001137,6.04e-14,6;UBERON:0001016,8.70e-14,75;UBERON:0010371,1.02e-12,73;UBERON:0002346,1.06e-11,64;UBERON:0003075,1.06e-11,64;UBERON:0007284,1.06e-11,64;UBERON:0002410,1.41e-11,9;UBERON:0002257,7.67e-11,3;UBERON:0002020,1.03e-10,34;UBERON:0000011,1.29e-09,3;UBERON:0000010,2.31e-09,11;UBERON:0003076,2.39e-09,12;UBERON:0003057,2.39e-09,12;UBERON:0010314,3.17e-09,92;UBERON:0002256,1.33e-07,2;UBERON:0004766,1.78e-07,2;UBERON:0008193,1.78e-07,2;UBERON:0005913,1.78e-07,2;UBERON:0011158,1.78e-07,2;UBERON:0005744,1.78e-07,2;UBERON:0003457,1.78e-07,2;UBERON:0008001,1.78e-07,2;UBERON:0007497,1.78e-07,2;UBERON:0009955,1.78e-07,2;UBERON:0003067,1.78e-07,2;UBERON:0002546,1.78e-07,2;UBERON:0007914,1.78e-07,2;UBERON:0005253,1.78e-07,2;UBERON:0002227,1.78e-07,2;UBERON:0001846,1.78e-07,2;UBERON:0004339,1.78e-07,2;UBERON:0002105,1.78e-07,2;UBERON:0001678,1.78e-07,2;UBERON:0003128,1.78e-07,2;UBERON:0001694,1.78e-07,2;UBERON:0004681,1.78e-07,2;UBERON:0001839,1.78e-07,2;UBERON:0001690,1.78e-07,2;UBERON:0001844,1.78e-07,2;UBERON:0001849,1.78e-07,2;UBERON:0002499,1.78e-07,2;UBERON:0001855,1.78e-07,2;UBERON:0011137,1.78e-07,2;UBERON:0001703,1.78e-07,2;UBERON:0010323,1.78e-07,2;UBERON:0003129,1.78e-07,2;UBERON:0003069,1.78e-07,2;UBERON:0003051,1.78e-07,2;UBERON:0004637,1.78e-07,2;UBERON:0004761,1.78e-07,2;UBERON:0010113,1.78e-07,2;UBERON:0009123,1.78e-07,2;UBERON:0010351,1.78e-07,2;UBERON:0009617,1.78e-07,2;UBERON:0005641,1.78e-07,2;UBERON:0010349,1.78e-07,2;UBERON:0001049,2.22e-07,52;UBERON:0005068,2.22e-07,52;UBERON:0006241,2.22e-07,52;UBERON:0007135,2.22e-07,52;UBERON:0000073,5.18e-07,54 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.933206510776299,0.405017814995072,1.05162480675691,1.99955689082663,5.30084498283872,1.10241719293459,0.862609239164127,0.919218786610021,0,0.255374676170375,0.307213066512487,1.05509030184155,0.914876436024097,0.52091337055676,0.279182999001381,0,0.15279824777681,3.83017161115768,6.12198227436143,2.79599168737951,0.151452386666368,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,2.95771181531029,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,1.25654352112864,0.695297280769106,0.255715457330331,0.62336413367868,0.811206315338788,0,0.124406970610093,0,0,0,0,0,0.30140963567143,1.2246569847239,1.2811372028485,1.3118241438362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0.630869845692382,1.3377599609307,0,0,0,0.928946687441754,0.257734922644187,0,0,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0.757736633841335,0.896987067609561,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.94652465824877,1.56175497718655,1.72338718186239,2.15071918157297,1.11399337041197,1.41538265394416,1.21443210502468,0.876767573733936,0.395287777946524,2.57057053137446,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.436725127492355,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,2.29158205375759,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,3.73634451303036,1.19707462020309,1.19513524027894,0.486213434136588,1.46729213839588,0.183843508450014,0.44449345560323,0.618105171716683,0,0,1.01391719956096,0.188626341386076,0.655490552289177,0.576226371643824,0.574354689556133,0,0,0.578727661391115,0.412085900803307,0.147198920134397,0.685738504770831,0.70990322463735,0,0.872078499793971,0.376437521661322,0.507687647350059,0.182927972872773,0.526139422875686,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.933206510776299,0.405017814995072,1.05162480675691,1.99955689082663,5.30084498283872,1.10241719293459,0.862609239164127,0.919218786610021,0,0.255374676170375,0.307213066512487,1.05509030184155,0.914876436024097,0.52091337055676,0.279182999001381,0,0.15279824777681,3.83017161115768,6.12198227436143,2.79599168737951,0.151452386666368,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,2.95771181531029,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,1.25654352112864,0.695297280769106,0.255715457330331,0.62336413367868,0.811206315338788,0,0.124406970610093,0,0,0,0,0,0.30140963567143,1.2246569847239,1.2811372028485,1.3118241438362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0.630869845692382,1.3377599609307,0,0,0,0.928946687441754,0.257734922644187,0,0,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0.757736633841335,0.896987067609561,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.94652465824877,1.56175497718655,1.72338718186239,2.15071918157297,1.11399337041197,1.41538265394416,1.21443210502468,0.876767573733936,0.395287777946524,2.57057053137446,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.436725127492355,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,2.29158205375759,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,3.73634451303036,1.19707462020309,1.19513524027894,0.486213434136588,1.46729213839588,0.183843508450014,0.44449345560323,0.618105171716683,0,0,1.01391719956096,0.188626341386076,0.655490552289177,0.576226371643824,0.574354689556133,0,0,0.578727661391115,0.412085900803307,0.147198920134397,0.685738504770831,0.70990322463735,0,0.872078499793971,0.376437521661322,0.507687647350059,0.182927972872773,0.526139422875686,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr10:57504816..57504829,+ | |||
}} | }} |
Latest revision as of 11:48, 4 August 2015
Short description: | p@chr10:57504816..57504829, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:57504816..57504829, + |
Coexpression cluster: | MCL_coexpression_mm9:1894 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.02e-18 | 33 |
neuronal stem cell | 7.02e-18 | 33 |
neuroblast | 7.02e-18 | 33 |
electrically signaling cell | 7.02e-18 | 33 |
ectodermal cell | 1.02e-16 | 44 |
neurectodermal cell | 1.02e-16 | 44 |
neural cell | 6.22e-15 | 43 |
electrically responsive cell | 1.21e-14 | 39 |
electrically active cell | 1.21e-14 | 39 |
autonomic neuron | 1.41e-11 | 9 |
neuron of the ventral spinal cord | 7.67e-11 | 3 |
embryonic cell | 3.58e-09 | 70 |
neuron of the dorsal spinal cord | 1.33e-07 | 2 |
receptor cell | 1.78e-07 | 2 |
auditory epithelial cell | 1.78e-07 | 2 |
sensory epithelial cell | 1.78e-07 | 2 |
CNS neuron (sensu Vertebrata) | 1.91e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.91e-07 | 23 |