FFCP PHASE1:Hg19::chr3:159557799..159557818,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_ENST00000483730_5end | |association_with_transcript=-30bp_to_ENST00000483730_5end | ||
|cluster_id=chr3:159557799..159557818,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_6_at_SCHIP1_5end | |description=CAGE_peak_6_at_SCHIP1_5end | ||
|id=chr3:159557799..159557818,+ | |id=chr3:159557799..159557818,+ | ||
|ontology_enrichment_celltype=CL:0002319;6.85e-11;25!CL:0000540;6.47e-07;6!CL:0000404;6.47e-07;6 | |ontology_enrichment_celltype=CL:0002319!5.06e-10!25;CL:0000047!1.80e-08!8;CL:0000133!1.60e-07!59 | ||
| | |ontology_enrichment_celltype_v019=CL:0002319;6.85e-11;25!CL:0000540;6.47e-07;6!CL:0000404;6.47e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.11e-11,25;CL:0000133,2.06e-10,59;CL:0000047,4.12e-10,8;CL:0000221,1.74e-07,72;CL:0000540,5.18e-07,6;CL:0000031,5.18e-07,6;CL:0000404,5.18e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.31e-14;82!CL:0000133;4.47e-07;59!CL:0000031;6.47e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
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|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;3.97e-51;32!UBERON:0001893;4.04e-51;34!UBERON:0002791;5.09e-51;32!UBERON:0003528;5.27e-51;34!UBERON:0002020;5.27e-51;34!UBERON:0002780;4.75e-46;41!UBERON:0001890;4.75e-46;41!UBERON:0000956;1.63e-44;25!UBERON:0000203;1.63e-44;25!UBERON:0000073;7.87e-42;53!UBERON:0002616;7.87e-42;53!UBERON:0002619;3.27e-40;22!UBERON:0001950;9.82e-37;20!UBERON:0001017;1.39e-29;75!UBERON:0000955;2.79e-28;68!UBERON:0001016;5.89e-28;83!UBERON:0002420;1.36e-16;9!UBERON:0007245;1.36e-16;9!UBERON:0010009;1.36e-16;9!UBERON:0010011;1.36e-16;9!UBERON:0000454;1.36e-16;9!UBERON:0000125;4.42e-16;9!UBERON:0002308;4.42e-16;9!UBERON:0009663;5.70e-13;7!UBERON:0001871;6.94e-13;6!UBERON:0004732;8.90e-13;13!UBERON:0000200;3.92e-12;6!UBERON:0004733;3.63e-11;12!UBERON:0002028;3.63e-11;12!UBERON:0002298;8.87e-11;6!UBERON:0011216;1.23e-10;132!UBERON:0007023;1.80e-10;114!UBERON:0000349;3.35e-10;5!UBERON:0002021;5.03e-10;5!UBERON:0001872;5.36e-10;5!UBERON:0000369;6.69e-08;4!UBERON:0002435;6.69e-08;4!UBERON:0000204;6.69e-08;4!UBERON:0002680;4.86e-07;9!UBERON:0001895;4.86e-07;9!UBERON:0010314;5.07e-07;132!UBERON:0001870;5.71e-07;3 | |||
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| ||
|short_description=p6@SCHIP1 | |short_description=p6@SCHIP1 | ||
}} | }} |
Latest revision as of 09:39, 16 September 2015
Short description: | p6@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCHIP1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -30bp_to_ENST00000483730_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.11e-11 | 25 |
neurectodermal cell | 2.06e-10 | 59 |
neuronal stem cell | 4.12e-10 | 8 |
ectodermal cell | 1.74e-07 | 72 |
neuron | 5.18e-07 | 6 |
neuroblast | 5.18e-07 | 6 |
electrically signaling cell | 5.18e-07 | 6 |