FFCP PHASE1:Hg19::chr9:139922758..139922769,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=20 | |EntrezGene=20 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32 | |HGNC=32 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZC7 | |UniProt=Q9BZC7 | ||
|association_with_transcript=-18bp_to_ENST00000265662,ENST00000371605,NM_001606,uc004ckl.1,uc011mel.1,uc011mem.1_5end | |association_with_transcript=-18bp_to_ENST00000265662,ENST00000371605,NM_001606,uc004ckl.1,uc011mel.1,uc011mem.1_5end | ||
|cluster_id=chr9:139922758..139922769,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_ABCA2_5end | |description=CAGE_peak_3_at_ABCA2_5end | ||
|id=chr9:139922758..139922769,- | |id=chr9:139922758..139922769,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.02e-13;82!UBERON:0006241;3.46e-07;3!UBERON:0003057;3.46e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.10e-30!94;UBERON:0001016!2.10e-30!94;UBERON:0005743!5.61e-30!86;UBERON:0001017!4.07e-28!82;UBERON:0001049!1.86e-26!57;UBERON:0005068!1.86e-26!57;UBERON:0006241!1.86e-26!57;UBERON:0007135!1.86e-26!57;UBERON:0000955!2.35e-25!69;UBERON:0006238!2.35e-25!69;UBERON:0002616!3.74e-23!59;UBERON:0002346!4.51e-23!90;UBERON:0003075!1.62e-22!86;UBERON:0007284!1.62e-22!86;UBERON:0002780!3.15e-21!41;UBERON:0001890!3.15e-21!41;UBERON:0006240!3.15e-21!41;UBERON:0003080!3.72e-20!42;UBERON:0002020!1.48e-19!34;UBERON:0003528!1.48e-19!34;UBERON:0001893!1.56e-19!34;UBERON:0002791!7.17e-19!33;UBERON:0001869!4.55e-18!32;UBERON:0007023!5.50e-18!115;UBERON:0003056!1.71e-15!61;UBERON:0000924!1.72e-15!173;UBERON:0006601!1.72e-15!173;UBERON:0004121!7.00e-15!169;UBERON:0000153!7.32e-15!129;UBERON:0007811!7.32e-15!129;UBERON:0000033!4.66e-14!123;UBERON:0002619!6.21e-14!22;UBERON:0000956!2.12e-13!25;UBERON:0000203!2.12e-13!25;UBERON:0001950!1.22e-12!20;UBERON:0002308!8.60e-08!9;UBERON:0000125!8.60e-08!9;UBERON:0002420!1.24e-07!9;UBERON:0007245!1.24e-07!9;UBERON:0010009!1.24e-07!9;UBERON:0010011!1.24e-07!9;UBERON:0000454!1.24e-07!9;UBERON:0003076!1.78e-07!15;UBERON:0003057!1.78e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.06e-36;34!UBERON:0002020;1.06e-36;34!UBERON:0001893;1.99e-36;34!UBERON:0002791;2.55e-35;32!UBERON:0001869;3.49e-35;32!UBERON:0002780;1.37e-32;41!UBERON:0001890;1.37e-32;41!UBERON:0002619;1.85e-32;22!UBERON:0000073;2.42e-32;53!UBERON:0002616;2.42e-32;53!UBERON:0001950;4.40e-29;20!UBERON:0000956;6.48e-28;25!UBERON:0000203;6.48e-28;25!UBERON:0000955;8.22e-23;68!UBERON:0001017;8.07e-22;75!UBERON:0001016;2.90e-19;83!UBERON:0000125;1.05e-17;9!UBERON:0002308;1.05e-17;9!UBERON:0002420;2.95e-17;9!UBERON:0007245;2.95e-17;9!UBERON:0010009;2.95e-17;9!UBERON:0010011;2.95e-17;9!UBERON:0000454;2.95e-17;9!UBERON:0009663;5.09e-14;7!UBERON:0004732;1.42e-13;13!UBERON:0002298;1.29e-12;6!UBERON:0004733;7.75e-12;12!UBERON:0002028;7.75e-12;12!UBERON:0000200;1.72e-11;6!UBERON:0007023;2.35e-10;114!UBERON:0002021;5.03e-10;5!UBERON:0000349;5.37e-10;5!UBERON:0001872;1.16e-09;5!UBERON:0000369;2.25e-08;4!UBERON:0002435;2.25e-08;4!UBERON:0000204;2.25e-08;4!UBERON:0011216;4.28e-08;132!UBERON:0002240;3.46e-07;3!UBERON:0005174;3.46e-07;3!UBERON:0001137;3.46e-07;3!UBERON:0000988;3.82e-07;3!UBERON:0001896;4.01e-07;3!UBERON:0005290;4.01e-07;3!UBERON:0002680;4.48e-07;9!UBERON:0001895;4.48e-07;9!UBERON:0010314;5.34e-07;132!UBERON:0001871;6.17e-07;6 | |||
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| ||
|short_description=p3@ABCA2 | |short_description=p3@ABCA2 | ||
}} | }} |
Latest revision as of 15:18, 16 September 2015
Short description: | p3@ABCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ABCA2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -18bp_to_ENST00000265662, ENST00000371605, NM_001606, uc004ckl.1, uc011mel.1, uc011mem.1_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | Q9BZC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data