FFCP PHASE1:Hg19::chrX:9754461..9754486,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=357 | |EntrezGene=357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=630 | |HGNC=630 | ||
|TSSclassifier=strong | |||
|UniProt=Q13796 | |UniProt=Q13796 | ||
|association_with_transcript=-9bp_to_ENST00000380913,NM_001649,uc004csu.1_5end | |association_with_transcript=-9bp_to_ENST00000380913,NM_001649,uc004csu.1_5end | ||
|cluster_id=chrX:9754461..9754486,+ | |||
|description=CAGE_peak_1_at_SHROOM2_5end | |description=CAGE_peak_1_at_SHROOM2_5end | ||
|id=chrX:9754461..9754486,+ | |id=chrX:9754461..9754486,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.95e-21!254;CL:0002139!7.13e-15!24;CL:0000115!9.07e-14!35;CL:0002078!1.13e-12!44;CL:0000213!1.83e-12!57;CL:0000215!1.83e-12!57;CL:0000071!5.47e-12!18;CL:0002546!5.47e-12!18;CL:0000076!1.42e-08!62;CL:0002321!6.27e-07!248 | |ontology_enrichment_celltype=CL:0000066!2.95e-21!254;CL:0002139!7.13e-15!24;CL:0000115!9.07e-14!35;CL:0002078!1.13e-12!44;CL:0000213!1.83e-12!57;CL:0000215!1.83e-12!57;CL:0000071!5.47e-12!18;CL:0002546!5.47e-12!18;CL:0000076!1.42e-08!62;CL:0002321!6.27e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.37e-17;24!CL:0000115;1.68e-14;36!CL:0000071;6.88e-14;18!CL:0002078;6.95e-10;45!CL:0000213;2.37e-09;58!CL:0000215;2.37e-09;58!CL:0002681;7.41e-08;12!CL:0002584;7.41e-08;12!CL:1000449;7.69e-08;15!CL:1000413;2.60e-07;9!CL:1000497;4.35e-07;17!CL:0002518;4.35e-07;17 | |ontology_enrichment_celltype_v019=CL:0002139;2.37e-17;24!CL:0000115;1.68e-14;36!CL:0000071;6.88e-14;18!CL:0002078;6.95e-10;45!CL:0000213;2.37e-09;58!CL:0000215;2.37e-09;58!CL:0002681;7.41e-08;12!CL:0002584;7.41e-08;12!CL:1000449;7.69e-08;15!CL:1000413;2.60e-07;9!CL:1000497;4.35e-07;17!CL:0002518;4.35e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.09e-17,24;CL:0000115,5.78e-17,36;CL:0000066,1.08e-16,253;CL:0002078,5.26e-15,45;CL:0000071,7.73e-14,18;CL:0002546,7.73e-14,18;CL:0000213,3.60e-13,58;CL:0000215,3.60e-13,58;CL:1000449,6.09e-08,15;CL:0002681,6.14e-08,12;CL:0002584,6.14e-08,12;CL:1000413,2.67e-07,9;CL:1000497,3.23e-07,17;CL:0002518,3.23e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;6.88e-14;18 | |ontology_enrichment_development_v019=CL:0002546;6.88e-14;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!5.61e-25!241;UBERON:0000025!1.01e-21!194;UBERON:0000477!1.14e-18!286;UBERON:0000119!4.90e-18!312;UBERON:0000483!9.97e-18!309;UBERON:0007023!2.14e-17!115;UBERON:0000468!1.56e-16!659;UBERON:0000922!7.45e-15!612;UBERON:0000466!1.04e-14!126;UBERON:0005172!3.59e-13!55;UBERON:0005173!3.59e-13!55;UBERON:0005177!5.17e-13!107;UBERON:0002050!1.82e-12!605;UBERON:0005423!1.82e-12!605;UBERON:0000467!1.99e-12!625;UBERON:0000480!3.12e-12!626;UBERON:0000923!3.73e-12!604;UBERON:0005291!3.73e-12!604;UBERON:0006598!3.73e-12!604;UBERON:0002532!3.73e-12!604;UBERON:0000064!4.97e-12!219;UBERON:0001986!5.47e-12!18;UBERON:0004638!5.47e-12!18;UBERON:0004852!5.47e-12!18;UBERON:0003914!1.33e-11!118;UBERON:0000481!1.57e-11!347;UBERON:0002417!3.63e-11!61;UBERON:0000916!3.63e-11!61;UBERON:0009569!4.90e-11!113;UBERON:0000062!1.40e-10!511;UBERON:0005743!2.16e-10!86;UBERON:0001017!2.21e-09!82;UBERON:0000489!2.22e-09!32;UBERON:0000464!3.01e-09!104;UBERON:0000487!3.99e-09!22;UBERON:0001049!4.38e-09!57;UBERON:0005068!4.38e-09!57;UBERON:0006241!4.38e-09!57;UBERON:0007135!4.38e-09!57;UBERON:0001008!7.11e-09!45;UBERON:0000475!7.17e-09!365;UBERON:0003103!1.14e-08!69;UBERON:0003075!1.15e-08!86;UBERON:0007284!1.15e-08!86;UBERON:0006554!1.16e-08!44;UBERON:0002346!2.10e-08!90;UBERON:0002553!2.24e-08!70;UBERON:0000073!2.49e-08!94;UBERON:0001016!2.49e-08!94;UBERON:0005156!3.07e-08!59;UBERON:0000990!3.07e-08!59;UBERON:0004119!3.32e-08!169;UBERON:0000925!3.32e-08!169;UBERON:0006595!3.32e-08!169;UBERON:0004921!3.33e-08!129;UBERON:0004185!3.33e-08!129;UBERON:0003064!5.48e-08!37;UBERON:0000955!6.17e-08!69;UBERON:0006238!6.17e-08!69;UBERON:0009854!8.81e-08!23;UBERON:0003886!9.42e-08!63;UBERON:0002113!1.14e-07!27;UBERON:0003918!1.14e-07!27;UBERON:0005095!1.14e-07!27;UBERON:0007687!1.14e-07!27;UBERON:0003133!1.23e-07!48;UBERON:0008835!1.44e-07!22;UBERON:0003894!1.44e-07!22;UBERON:0000080!1.51e-07!18;UBERON:0002120!1.51e-07!18;UBERON:0004875!1.51e-07!18;UBERON:0005721!1.51e-07!18;UBERON:0005754!1.51e-07!18;UBERON:0007297!1.51e-07!18;UBERON:0002616!1.67e-07!59;UBERON:0009497!1.88e-07!25;UBERON:0000015!1.88e-07!25;UBERON:0002423!1.88e-07!25;UBERON:0006235!1.88e-07!25;UBERON:0004161!1.88e-07!25;UBERON:0005631!1.89e-07!14;UBERON:0000158!1.89e-07!14;UBERON:0006914!2.00e-07!25;UBERON:0003080!2.09e-07!42;UBERON:0002107!2.98e-07!19;UBERON:0006925!2.98e-07!19;UBERON:0008836!2.98e-07!19;UBERON:0004121!3.15e-07!169;UBERON:0002780!3.54e-07!41;UBERON:0001890!3.54e-07!41;UBERON:0006240!3.54e-07!41;UBERON:0006555!3.59e-07!17;UBERON:0005103!3.59e-07!17;UBERON:0000083!3.59e-07!17;UBERON:0009201!3.59e-07!17;UBERON:0004819!3.59e-07!17;UBERON:0006553!3.59e-07!17;UBERON:0003074!3.59e-07!17;UBERON:0003060!3.59e-07!17;UBERON:0000924!3.85e-07!173;UBERON:0006601!3.85e-07!173;UBERON:0005911!3.93e-07!82;UBERON:0003887!4.35e-07!21;UBERON:0000353!4.44e-07!17;UBERON:0004876!4.45e-07!20;UBERON:0002530!4.87e-07!59;UBERON:0000077!7.09e-07!130;UBERON:0009856!9.99e-07!26 | |ontology_enrichment_uberon=UBERON:0004111!5.61e-25!241;UBERON:0000025!1.01e-21!194;UBERON:0000477!1.14e-18!286;UBERON:0000119!4.90e-18!312;UBERON:0000483!9.97e-18!309;UBERON:0007023!2.14e-17!115;UBERON:0000468!1.56e-16!659;UBERON:0000922!7.45e-15!612;UBERON:0000466!1.04e-14!126;UBERON:0005172!3.59e-13!55;UBERON:0005173!3.59e-13!55;UBERON:0005177!5.17e-13!107;UBERON:0002050!1.82e-12!605;UBERON:0005423!1.82e-12!605;UBERON:0000467!1.99e-12!625;UBERON:0000480!3.12e-12!626;UBERON:0000923!3.73e-12!604;UBERON:0005291!3.73e-12!604;UBERON:0006598!3.73e-12!604;UBERON:0002532!3.73e-12!604;UBERON:0000064!4.97e-12!219;UBERON:0001986!5.47e-12!18;UBERON:0004638!5.47e-12!18;UBERON:0004852!5.47e-12!18;UBERON:0003914!1.33e-11!118;UBERON:0000481!1.57e-11!347;UBERON:0002417!3.63e-11!61;UBERON:0000916!3.63e-11!61;UBERON:0009569!4.90e-11!113;UBERON:0000062!1.40e-10!511;UBERON:0005743!2.16e-10!86;UBERON:0001017!2.21e-09!82;UBERON:0000489!2.22e-09!32;UBERON:0000464!3.01e-09!104;UBERON:0000487!3.99e-09!22;UBERON:0001049!4.38e-09!57;UBERON:0005068!4.38e-09!57;UBERON:0006241!4.38e-09!57;UBERON:0007135!4.38e-09!57;UBERON:0001008!7.11e-09!45;UBERON:0000475!7.17e-09!365;UBERON:0003103!1.14e-08!69;UBERON:0003075!1.15e-08!86;UBERON:0007284!1.15e-08!86;UBERON:0006554!1.16e-08!44;UBERON:0002346!2.10e-08!90;UBERON:0002553!2.24e-08!70;UBERON:0000073!2.49e-08!94;UBERON:0001016!2.49e-08!94;UBERON:0005156!3.07e-08!59;UBERON:0000990!3.07e-08!59;UBERON:0004119!3.32e-08!169;UBERON:0000925!3.32e-08!169;UBERON:0006595!3.32e-08!169;UBERON:0004921!3.33e-08!129;UBERON:0004185!3.33e-08!129;UBERON:0003064!5.48e-08!37;UBERON:0000955!6.17e-08!69;UBERON:0006238!6.17e-08!69;UBERON:0009854!8.81e-08!23;UBERON:0003886!9.42e-08!63;UBERON:0002113!1.14e-07!27;UBERON:0003918!1.14e-07!27;UBERON:0005095!1.14e-07!27;UBERON:0007687!1.14e-07!27;UBERON:0003133!1.23e-07!48;UBERON:0008835!1.44e-07!22;UBERON:0003894!1.44e-07!22;UBERON:0000080!1.51e-07!18;UBERON:0002120!1.51e-07!18;UBERON:0004875!1.51e-07!18;UBERON:0005721!1.51e-07!18;UBERON:0005754!1.51e-07!18;UBERON:0007297!1.51e-07!18;UBERON:0002616!1.67e-07!59;UBERON:0009497!1.88e-07!25;UBERON:0000015!1.88e-07!25;UBERON:0002423!1.88e-07!25;UBERON:0006235!1.88e-07!25;UBERON:0004161!1.88e-07!25;UBERON:0005631!1.89e-07!14;UBERON:0000158!1.89e-07!14;UBERON:0006914!2.00e-07!25;UBERON:0003080!2.09e-07!42;UBERON:0002107!2.98e-07!19;UBERON:0006925!2.98e-07!19;UBERON:0008836!2.98e-07!19;UBERON:0004121!3.15e-07!169;UBERON:0002780!3.54e-07!41;UBERON:0001890!3.54e-07!41;UBERON:0006240!3.54e-07!41;UBERON:0006555!3.59e-07!17;UBERON:0005103!3.59e-07!17;UBERON:0000083!3.59e-07!17;UBERON:0009201!3.59e-07!17;UBERON:0004819!3.59e-07!17;UBERON:0006553!3.59e-07!17;UBERON:0003074!3.59e-07!17;UBERON:0003060!3.59e-07!17;UBERON:0000924!3.85e-07!173;UBERON:0006601!3.85e-07!173;UBERON:0005911!3.93e-07!82;UBERON:0003887!4.35e-07!21;UBERON:0000353!4.44e-07!17;UBERON:0004876!4.45e-07!20;UBERON:0002530!4.87e-07!59;UBERON:0000077!7.09e-07!130;UBERON:0009856!9.99e-07!26 | ||
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| ||
|short_description=p1@SHROOM2 | |short_description=p1@SHROOM2 | ||
}} | }} |
Latest revision as of 15:27, 16 September 2015
Short description: | p1@SHROOM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHROOM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000380913, NM_001649, uc004csu.1_5end |
EntrezGene: | SHROOM2 |
HGNC: | 630 |
UniProt: | Q13796 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.09e-17 | 24 |
endothelial cell | 5.78e-17 | 36 |
epithelial cell | 1.08e-16 | 253 |
meso-epithelial cell | 5.26e-15 | 45 |
blood vessel endothelial cell | 7.73e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.73e-14 | 18 |
lining cell | 3.60e-13 | 58 |
barrier cell | 3.60e-13 | 58 |
epithelial cell of nephron | 6.09e-08 | 15 |
kidney cortical cell | 6.14e-08 | 12 |
renal cortical epithelial cell | 6.14e-08 | 12 |
endothelial cell of artery | 2.67e-07 | 9 |
kidney cell | 3.23e-07 | 17 |
kidney epithelial cell | 3.23e-07 | 17 |