FFCP PHASE1:Hg19::chrX:9754461..9754486,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:9754461..9754486,+
|short_description=p1@SHROOM2
|description=CAGE_peak_1_at_SHROOM2_5end
|association_with_transcript=-9bp_to_ENST00000380913,NM_001649,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=357 | |EntrezGene=357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=630 | |HGNC=630 | ||
|TSSclassifier=strong | |||
|UniProt=Q13796 | |UniProt=Q13796 | ||
|association_with_transcript=-9bp_to_ENST00000380913,NM_001649,uc004csu.1_5end | |||
|cluster_id=chrX:9754461..9754486,+ | |||
|description=CAGE_peak_1_at_SHROOM2_5end | |||
|id=chrX:9754461..9754486,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.95e-21!254;CL:0002139!7.13e-15!24;CL:0000115!9.07e-14!35;CL:0002078!1.13e-12!44;CL:0000213!1.83e-12!57;CL:0000215!1.83e-12!57;CL:0000071!5.47e-12!18;CL:0002546!5.47e-12!18;CL:0000076!1.42e-08!62;CL:0002321!6.27e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.37e-17;24!CL:0000115;1.68e-14;36!CL:0000071;6.88e-14;18!CL:0002078;6.95e-10;45!CL:0000213;2.37e-09;58!CL:0000215;2.37e-09;58!CL:0002681;7.41e-08;12!CL:0002584;7.41e-08;12!CL:1000449;7.69e-08;15!CL:1000413;2.60e-07;9!CL:1000497;4.35e-07;17!CL:0002518;4.35e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.09e-17,24;CL:0000115,5.78e-17,36;CL:0000066,1.08e-16,253;CL:0002078,5.26e-15,45;CL:0000071,7.73e-14,18;CL:0002546,7.73e-14,18;CL:0000213,3.60e-13,58;CL:0000215,3.60e-13,58;CL:1000449,6.09e-08,15;CL:0002681,6.14e-08,12;CL:0002584,6.14e-08,12;CL:1000413,2.67e-07,9;CL:1000497,3.23e-07,17;CL:0002518,3.23e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;6.88e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;6.88e-14;18!UBERON:0001986;6.88e-14;18!UBERON:0004852;6.88e-14;18!UBERON:0000487;4.50e-11;22!UBERON:0000489;3.54e-09;29!UBERON:0006914;8.72e-09;25!UBERON:0000490;1.23e-08;33!UBERON:0000353;1.74e-08;15!UBERON:0005172;1.92e-08;52!UBERON:0005173;1.92e-08;52!UBERON:0002423;2.80e-08;25!UBERON:0006554;3.15e-08;30!UBERON:0001008;3.15e-08;30!UBERON:0002107;3.62e-08;19!UBERON:0006925;3.62e-08;19!UBERON:0001225;7.41e-08;12!UBERON:0008987;7.41e-08;12!UBERON:0006555;7.69e-08;15!UBERON:0004819;7.69e-08;15!UBERON:0001285;7.69e-08;15!UBERON:0007684;7.69e-08;15!UBERON:0002113;2.58e-07;24!UBERON:0011143;2.58e-07;24!UBERON:0003915;2.60e-07;9!UBERON:0004700;2.60e-07;9!UBERON:0001917;2.60e-07;9 | |||
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| ||
|short_description=p1@SHROOM2 | |||
}} | }} |
Latest revision as of 15:27, 16 September 2015
Short description: | p1@SHROOM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHROOM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000380913, NM_001649, uc004csu.1_5end |
EntrezGene: | SHROOM2 |
HGNC: | 630 |
UniProt: | Q13796 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.09e-17 | 24 |
endothelial cell | 5.78e-17 | 36 |
epithelial cell | 1.08e-16 | 253 |
meso-epithelial cell | 5.26e-15 | 45 |
blood vessel endothelial cell | 7.73e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.73e-14 | 18 |
lining cell | 3.60e-13 | 58 |
barrier cell | 3.60e-13 | 58 |
epithelial cell of nephron | 6.09e-08 | 15 |
kidney cortical cell | 6.14e-08 | 12 |
renal cortical epithelial cell | 6.14e-08 | 12 |
endothelial cell of artery | 2.67e-07 | 9 |
kidney cell | 3.23e-07 | 17 |
kidney epithelial cell | 3.23e-07 | 17 |