FFCP PHASE1:Hg19::chr12:12837423..12837501,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2842 | |EntrezGene=2842 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4473 | |HGNC=4473 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000540510,uc001rar.3_5end | |association_with_transcript=0bp_to_ENST00000540510,uc001rar.3_5end | ||
|cluster_id=chr12:12837423..12837501,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_1_at_GPR19_5end | |description=CAGE_peak_1_at_GPR19_5end | ||
|id=chr12:12837423..12837501,- | |id=chr12:12837423..12837501,- | ||
|ontology_enrichment_celltype=CL:0000047!5.11e-11!8;CL:0000540!4.12e-09!6;CL:0000031!4.12e-09!6;CL:0000404!4.12e-09!6;CL:0002322!1.24e-08!5;CL:0000133!2.23e-08!59;CL:0000148!9.78e-08!10;CL:0000541!9.78e-08!10;CL:0002319!3.16e-07!25 | |ontology_enrichment_celltype=CL:0000047!5.11e-11!8;CL:0000540!4.12e-09!6;CL:0000031!4.12e-09!6;CL:0000404!4.12e-09!6;CL:0002322!1.24e-08!5;CL:0000133!2.23e-08!59;CL:0000148!9.78e-08!10;CL:0000541!9.78e-08!10;CL:0002319!3.16e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.00e-12;6!CL:0000404;1.00e-12;6!CL:0002322;5.91e-12;5!CL:0000148;4.80e-11;10!CL:0002321;1.68e-08;15!CL:0002319;1.23e-07;25!CL:0000147;1.81e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.88e-15,8;CL:0000540,1.18e-12,6;CL:0000031,1.18e-12,6;CL:0000404,1.18e-12,6;CL:0002322,5.91e-12,5;CL:0000148,4.94e-11,10;CL:0000541,4.94e-11,10;CL:0000133,1.31e-10,59;CL:0000221,9.70e-08,72;CL:0002319,1.33e-07,25;CL:0000147,1.84e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.34e-19;82!CL:0000031;1.00e-12;6 | |||
|ontology_enrichment_disease=DOID:3095!1.07e-12!22;DOID:2994!1.07e-12!22;DOID:171!3.78e-07!10 | |ontology_enrichment_disease=DOID:3095!1.07e-12!22;DOID:2994!1.07e-12!22;DOID:171!3.78e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.80e-11;22!DOID:2994;1.80e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.83e-11,22;DOID:2994,1.83e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.27e-59!94;UBERON:0001016!1.27e-59!94;UBERON:0001017!2.07e-59!82;UBERON:0005743!1.85e-57!86;UBERON:0001049!3.48e-52!57;UBERON:0005068!3.48e-52!57;UBERON:0006241!3.48e-52!57;UBERON:0007135!3.48e-52!57;UBERON:0000955!1.10e-44!69;UBERON:0006238!1.10e-44!69;UBERON:0002616!1.93e-43!59;UBERON:0002780!1.81e-42!41;UBERON:0001890!1.81e-42!41;UBERON:0006240!1.81e-42!41;UBERON:0003080!3.89e-41!42;UBERON:0002346!3.74e-37!90;UBERON:0003075!1.54e-35!86;UBERON:0007284!1.54e-35!86;UBERON:0001893!1.90e-34!34;UBERON:0002020!2.25e-34!34;UBERON:0003528!2.25e-34!34;UBERON:0002791!3.30e-33!33;UBERON:0001869!1.79e-32!32;UBERON:0000924!6.30e-32!173;UBERON:0006601!6.30e-32!173;UBERON:0004121!2.37e-30!169;UBERON:0007023!9.09e-29!115;UBERON:0003056!4.58e-27!61;UBERON:0002619!4.13e-26!22;UBERON:0000956!5.55e-24!25;UBERON:0000203!5.55e-24!25;UBERON:0001950!1.14e-23!20;UBERON:0000033!5.84e-21!123;UBERON:0000153!5.56e-20!129;UBERON:0007811!5.56e-20!129;UBERON:0002420!3.84e-12!9;UBERON:0007245!3.84e-12!9;UBERON:0010009!3.84e-12!9;UBERON:0010011!3.84e-12!9;UBERON:0000454!3.84e-12!9;UBERON:0003076!6.51e-12!15;UBERON:0003057!6.51e-12!15;UBERON:0002308!7.06e-12!9;UBERON:0000125!7.06e-12!9;UBERON:0000025!2.41e-11!194;UBERON:0004732!5.34e-10!13;UBERON:0009663!8.90e-10!7;UBERON:0001894!2.39e-09!7;UBERON:0006222!2.39e-09!7;UBERON:0004733!4.31e-09!12;UBERON:0002028!4.31e-09!12;UBERON:0007277!4.31e-09!12;UBERON:0000200!1.07e-08!6;UBERON:0001871!1.66e-08!7;UBERON:0000349!9.04e-08!5;UBERON:0001872!1.34e-07!5;UBERON:0004111!1.83e-07!241;UBERON:0002021!2.74e-07!5;UBERON:0002298!2.87e-07!8;UBERON:0000369!6.35e-07!4;UBERON:0002435!6.35e-07!4;UBERON:0000204!6.35e-07!4;UBERON:0010082!6.35e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.28e-43;41!UBERON:0001890;7.28e-43;41!UBERON:0001893;8.27e-41;34!UBERON:0003528;1.80e-40;34!UBERON:0002020;1.80e-40;34!UBERON:0001869;3.09e-40;32!UBERON:0002791;5.82e-40;32!UBERON:0000073;8.15e-40;53!UBERON:0002616;8.15e-40;53!UBERON:0002619;5.91e-38;22!UBERON:0001950;2.21e-34;20!UBERON:0000956;9.03e-33;25!UBERON:0000203;9.03e-33;25!UBERON:0001017;4.03e-29;75!UBERON:0000955;7.17e-29;68!UBERON:0001016;5.01e-27;83!UBERON:0002420;4.46e-17;9!UBERON:0007245;4.46e-17;9!UBERON:0010009;4.46e-17;9!UBERON:0010011;4.46e-17;9!UBERON:0000454;4.46e-17;9!UBERON:0000125;1.18e-16;9!UBERON:0002308;1.18e-16;9!UBERON:0009663;1.33e-13;7!UBERON:0001894;5.45e-13;7!UBERON:0004732;3.43e-12;13!UBERON:0000200;4.98e-12;6!UBERON:0004733;6.35e-11;12!UBERON:0002028;6.35e-11;12!UBERON:0000349;1.22e-10;5!UBERON:0001872;2.07e-10;5!UBERON:0007023;2.18e-10;114!UBERON:0002298;2.18e-10;6!UBERON:0001871;2.69e-10;6!UBERON:0002021;5.06e-10;5!UBERON:0000369;2.04e-09;4!UBERON:0002435;2.04e-09;4!UBERON:0000204;2.04e-09;4!UBERON:0011216;2.90e-09;132!UBERON:0003296;2.20e-08;4!UBERON:0010133;2.20e-08;4!UBERON:0002784;1.45e-07;4!UBERON:0005383;1.94e-07;3!UBERON:0005382;1.94e-07;3!UBERON:0002680;5.03e-07;9!UBERON:0001895;5.03e-07;9!UBERON:0001870;7.77e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.88e-83,89;UBERON:0001017,4.52e-82,81;UBERON:0001049,4.31e-74,56;UBERON:0005068,4.31e-74,56;UBERON:0006241,4.31e-74,56;UBERON:0007135,4.31e-74,56;UBERON:0000073,1.78e-69,53;UBERON:0002616,1.78e-69,53;UBERON:0000955,8.52e-63,68;UBERON:0006238,8.52e-63,68;UBERON:0002780,6.40e-60,41;UBERON:0001890,6.40e-60,41;UBERON:0003080,6.40e-60,41;UBERON:0006240,6.40e-60,41;UBERON:0003075,3.27e-52,82;UBERON:0007284,3.27e-52,82;UBERON:0002346,4.58e-51,86;UBERON:0001893,4.06e-48,34;UBERON:0003528,5.18e-48,34;UBERON:0002020,5.18e-48,34;UBERON:0001869,3.29e-45,32;UBERON:0010371,5.55e-45,104;UBERON:0002791,8.24e-45,32;UBERON:0004121,3.79e-43,171;UBERON:0000924,3.79e-43,171;UBERON:0006601,3.79e-43,171;UBERON:0003056,5.58e-43,61;UBERON:0002619,5.98e-38,22;UBERON:0001950,2.39e-34,20;UBERON:0000956,9.12e-33,25;UBERON:0000203,9.12e-33,25;UBERON:0007023,1.65e-30,114;UBERON:0011216,4.85e-30,223;UBERON:0010314,4.11e-28,132;UBERON:0002420,4.17e-17,9;UBERON:0007245,4.17e-17,9;UBERON:0010009,4.17e-17,9;UBERON:0010011,4.17e-17,9;UBERON:0000454,4.17e-17,9;UBERON:0000125,1.02e-16,9;UBERON:0002308,1.02e-16,9;UBERON:0000025,8.99e-16,192;UBERON:0003076,5.11e-15,15;UBERON:0003057,5.11e-15,15;UBERON:0009663,1.25e-13,7;UBERON:0001894,5.30e-13,7;UBERON:0006222,5.30e-13,7;UBERON:0004732,2.88e-12,13;UBERON:0000200,4.79e-12,6;UBERON:0004733,5.71e-11,12;UBERON:0002028,5.71e-11,12;UBERON:0007277,5.71e-11,12;UBERON:0000349,1.09e-10,5;UBERON:0001872,1.95e-10,5;UBERON:0002298,2.07e-10,6;UBERON:0001871,2.63e-10,6;UBERON:0002021,5.53e-10,5;UBERON:0004111,7.28e-10,240;UBERON:0000369,1.89e-09,4;UBERON:0002435,1.89e-09,4;UBERON:0000204,1.89e-09,4;UBERON:0010082,1.89e-09,4;UBERON:0003296,2.20e-08,4;UBERON:0010133,2.20e-08,4;UBERON:0000483,4.47e-08,306;UBERON:0000119,7.31e-08,309;UBERON:0002784,1.39e-07,4;UBERON:0005383,1.88e-07,3;UBERON:0005382,1.88e-07,3;UBERON:0002680,4.36e-07,9;UBERON:0001895,4.36e-07,9;UBERON:0010092,4.36e-07,9;UBERON:0001870,8.58e-07,3 | |||
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|short_description=p1@GPR19 | |short_description=p1@GPR19 | ||
}} | }} |
Latest revision as of 07:00, 17 September 2015
Short description: | p1@GPR19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR19_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000540510, uc001rar.3_5end |
EntrezGene: | GPR19 |
HGNC: | 4473 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.88e-15 | 8 |
neuron | 1.18e-12 | 6 |
neuroblast | 1.18e-12 | 6 |
electrically signaling cell | 1.18e-12 | 6 |
embryonic stem cell | 5.91e-12 | 5 |
melanocyte | 4.94e-11 | 10 |
melanoblast | 4.94e-11 | 10 |
neurectodermal cell | 1.31e-10 | 59 |
ectodermal cell | 9.70e-08 | 72 |
neural cell | 1.33e-07 | 25 |
pigment cell | 1.84e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.83e-11 | 22 |
germ cell cancer | 1.83e-11 | 22 |